Dneo009897.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila neoperkinsi
Gene Symbol
srp
Assembly
GCA_037043555.1
Location
JBAMBG010006276.1:27462-40330[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-18 8.4e-15 54.1 2.0 1 35 936 969 936 970 0.97

Sequence Information

Coding Sequence
ATGACCAAGACTAGCAAGGCGAAGGAAAAGGTTAAGAATAGTAGTGCCGCAATGCCGCGCGTTCCGAGCAATTTACTGGCGAGTGCCGCCAAAATGAAGATCACCAAAGCGCTGGCCAATGCCAAGAAGCAAGCAGTGCAAAAAGGCGCTGGCGACAAGGCAACAGGatcaaatgcagcagcagcaacaacagcagcttaCACTCAACAGGCGGTCGTTGTGAAAGAGACGGCAATAGAGGCAGCGCAGGAGAACGGCGCCGCTCAAAGGCAGCaaacagcgacgacgacgacgacgtcgccGTCAGCGTCATCGTTGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCATACATCAGTTGCTAGCGAAACACCGAAGCAAGCGGTTACcagcgcaacaacagcagcagcaacagcagcagcaacaattgcaaattcaACGATCGTTTTTGCTTATGATGAGAATAACGTAGCTTGTGACGTCACTAGCAAAACTGTTGCAGACGAAACGGCTAATAACAATCCACATAAAGTTGAGCTAAAAACCGAATGCGAAACGAAACTAGTTGAAgagacagcaacaggaacagaaacaacagcaacaacaacaacagcgagcgataaatattacaaaatcgTTGATAAGTGTAAAAGTGAGATAAGTGATGAAaacacaatagcaacaacaacagcaacagcaacaacaacagcaacagcagctattTTGCCGGCTGCAGTGATAAATAGTAATCAGCAAAGCGACGCGAGTGAAAGTGttgacaacaaaatcaaaaCCAACTAtgcacatcagcagcagcaacaggcagaacaacaacagcagcagcaacaaatttacgagcagcaacagtatctgcaacagcaattgctaagccaacagcagcaacagcaacagcagcaacagcaacaagagcatcACGCCAGCTGGTTGGCCTACAACAATTGCGCTTACGATTtaactagcagcagcagcagtgcagcaacagcagcagcagcagccgcggcagccgcagcagcagcaacacaacagGATAAAACTGAATTATATGCACTGGCTGCCTCACAGCAACTTTTGGCTCATTTTCCCTATCACAATCATCCCCACGCCCTTTTGtacgagcagcaacagcagcaaccgcagagcgccaacagcaacagcagcacggATCCCATAATGCGCAATAATTTTACGCTGTACAGCGTATATGGCGGTGGAGGAGGAGTAGGAGGAGGTGGTGGCGTTGGTAGCGCCATCACACCCACTACAcacgagcaacagcagctgcagcaacatgttgccgctgtggcaacagcagcagcagcaaattcaGTCATTGCGCACACAACGCACGCCCAAACGCCCAACATCGATGAGGTCATCCAGGATACGCTGAAGGACGAGTGCTTCGAGGAGAATCATGGCACCAGCTATCATATGCTGACCGCTGTCTCCGATATGCATGTGTTGAAGGACGCAAATGCAACCATTTACTCCATGTCGCACGAtcagttgctgcaacagcaccagcagcaacagcagcaacagcagcagcagcatcaacagcatctgcaacatcatcatcatttgcagcagcaacattcgCATCATcattcgcagcagcaacaccataacaacaacaattcggCCAGTTCGGTGGGCGGTGATTCGCCGTCGCCTTCGCACACGctcgccgccgctgccgccgcccaTGCCAGCGATGTGGCAACGCTACAGAGCTTTACCCAATTAACAAGCGCACCACCCAGCAGTGGTTTGCATCGCGATAGTTATGGCAGCCTCTCGCCAGGCAGCTATTTCAGCACACAGCTCAGCCCAGTGCTGCAGAGCAGCTCTGTCTATGCAAGTCCTTTGCTCGCATCGACCGCCAATGGCTTGCAGTATGGCATGCCAACGGTGTCCTcgcccacccacacacacgcccagctacagcagcaacatcaccaacagcaccaacagcagcagcagcagcaacatcatcagcatcacaATTCGACGAGCAGCAGTCCTGGTCCAGTGGGTCAGCTCCACACGAGTGGCTCGACTGCAGCTGGACACAGCTCGCTGTTGGATGATGGCTATGGATCGCCAAAGAGTAGCCATAGTGGCAACGGTGGCGCAAGTGGGGGTGGTGGCACCCTGCCAGCCTTCCAGCGCATTGCGCCGACCAGCGGTGCTGCTGGTTATGGAAATGGCGTGGCCAATGGCTCTGGCAGTGGTGCCGAACGTGCTGGCTACGCATCGCTGCCCAATTACCGCACACATGGCGATGCCTGGAGTGGTCATTATGAACAAATGAGCTATGCGCCCAGTGCCAACAGCCAGGGGCAGTTGGGTGGCAACGCTGGTGGTGCAGCGGTTACAAATGTGATACGCAATGGAcgtgttgttgccgctgccgcagccgctgctgctgtcgatggTGCCGCCAACGTTGTCGATCCTGCGCGGGCGTTCCTCGCATCGGCATCGCTAACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAACGTGAACGCCGGTAGCCGCATTAAGGCCACAATAAATGCCAACAGCGCTGCCGGTGCCGGCGCAGGCTCAACGTCAGCGACAACGTCGTCAGTGACTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCTCGACGTGCTGGCATGTCCTGTTCCAATTGCCAGACGAGTTACACATCGCTGTGGCGCCGCAATCCTGGCGGCGAGCCCGTCTGCAATGCCTGCGGCCTTTACTTCAAGCTGCACAATGTGGTGCGTCCACTGACCATGAAAAAGGACACCATACAGAAACGCAAACGTAAACCGAAGGGCACCAAGAGTGAAAAGTCGAAAAAGATGCGATCCTCGCAGACGGCAGCCTTAGTTGCCACAAATACCAATGCCTGCCACAATGTGAACATGCAACAGCAGATTTCGGATGTCAATGATGAAATGAAACCACTCGCATATATGTCATACGCatcacagcaacagctacagcagcaacagcaactaaacATTGAGCAACATTCATCAGCGGCCAGCTCGCCGCAAAGCATGGTTTCCTCCTCATTATCACCCAATACAGcatctcaacaacaacaacaactgcaacagcaacagcagcagcagcaacagcaacagctttgTGCTGGCTTGGACATGTCGCCCACATCCTCCTATCAAATGTCGCCCATtaacatgcaacagcagcagcagcatccgcaACAGCAAtcatgcagcatgcagcattcACCTAGCACGCCCACATCAGCCATGTCACATTCCATTTATTCCACACCATCGCCTACGCagcttaacaacaacaattcactatttaatcacaacaacaataacaatgagaataacaaacaaattatacagAAATATCTACAAGCTCAACCAATGCGCAACACCAACGATCAACAATTAttggcacagcagcaacttaTGCACCTGATGCCGAACTCCATTacggcagcagctgcggcagcagcagcagcagcggcggcggccaTGAACACGGCAATCAAATCGGAGTCGGcctccaacagcaacagcaacaacagcaacaacagcaacagcagcagcaacaacaagcaattaggtgccacaacaacagcaacaacaccgaCCACGGCATCGAGCACACTATCCTCACTGAGTCTCAACCGCAGCAACATTATCAGCCTGCAAAATCCCTATCAACAGCTTGGTCAGACGGAGATGCCCTTGTGTAAATCGGCACTAAGCGGTCGCACCTCATCCCCCTACTATCATCTAGCTGAGGAGGAGCAACCGGCCATTATAAAACTGGAGCAATTGGatcaccaacagcagcagcaacagcagcagcaacagcaacaacaacatcaacagcaacagcagcaacatgatGAAATGTTACTAAGTCGTTCAACATCAATCGATGAGCACTACGAACTGGCCGCCTATCatcgccagcagcaactgcagcagcaacacaatctacagcagcaacacgatCAACAGATTGCCAGCTATGCGTTACACGCtgctgcacagcagcaactgcacgAATTTGAACGCAAATATGGCGTTGAGCGCGAGACAATTGTTAAAATGGAGTAA
Protein Sequence
MTKTSKAKEKVKNSSAAMPRVPSNLLASAAKMKITKALANAKKQAVQKGAGDKATGSNAAAATTAAYTQQAVVVKETAIEAAQENGAAQRQQTATTTTTSPSASSLSPLATANLSSTFESKAHTSVASETPKQAVTSATTAAATAAATIANSTIVFAYDENNVACDVTSKTVADETANNNPHKVELKTECETKLVEETATGTETTATTTTASDKYYKIVDKCKSEISDENTIATTTATATTTATAAILPAAVINSNQQSDASESVDNKIKTNYAHQQQQQAEQQQQQQQIYEQQQYLQQQLLSQQQQQQQQQQQQEHHASWLAYNNCAYDLTSSSSSAATAAAAAAAAAAAATQQDKTELYALAASQQLLAHFPYHNHPHALLYEQQQQQPQSANSNSSTDPIMRNNFTLYSVYGGGGGVGGGGGVGSAITPTTHEQQQLQQHVAAVATAAAANSVIAHTTHAQTPNIDEVIQDTLKDECFEENHGTSYHMLTAVSDMHVLKDANATIYSMSHDQLLQQHQQQQQQQQQQHQQHLQHHHHLQQQHSHHHSQQQHHNNNNSASSVGGDSPSPSHTLAAAAAAHASDVATLQSFTQLTSAPPSSGLHRDSYGSLSPGSYFSTQLSPVLQSSSVYASPLLASTANGLQYGMPTVSSPTHTHAQLQQQHHQQHQQQQQQQHHQHHNSTSSSPGPVGQLHTSGSTAAGHSSLLDDGYGSPKSSHSGNGGASGGGGTLPAFQRIAPTSGAAGYGNGVANGSGSGAERAGYASLPNYRTHGDAWSGHYEQMSYAPSANSQGQLGGNAGGAAVTNVIRNGRVVAAAAAAAAVDGAANVVDPARAFLASASLTATLLDADFFTEGRECVNCVAAESGGDFYKTFPFNVNAGSRIKATINANSAAGAGAGSTSATTSSVTSTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRSSQTAALVATNTNACHNVNMQQQISDVNDEMKPLAYMSYASQQQLQQQQQLNIEQHSSAASSPQSMVSSSLSPNTASQQQQQLQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQHPQQQSCSMQHSPSTPTSAMSHSIYSTPSPTQLNNNNSLFNHNNNNNENNKQIIQKYLQAQPMRNTNDQQLLAQQQLMHLMPNSITAAAAAAAAAAAAAMNTAIKSESASNSNSNNSNNSNSSSNNKQLGATTTATTPTTASSTLSSLSLNRSNIISLQNPYQQLGQTEMPLCKSALSGRTSSPYYHLAEEEQPAIIKLEQLDHQQQQQQQQQQQQQHQQQQQQHDEMLLSRSTSIDEHYELAAYHRQQQLQQQHNLQQQHDQQIASYALHAAAQQQLHEFERKYGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00596315;
90% Identity
iTF_00583338;
80% Identity
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