Basic Information

Insect: Drosophila neoperkinsi
Gene Symbol: -
Assembly: GCA_037043555.1
Location: JBAMBG010004056.1:24755-55330[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0051 0.38 11.3 0.2 1 23 1351 1374 1351 1374 0.96

2 8 0.014 1.1 9.9 1.0 1 23 1379 1402 1379 1402 0.96

3 8 0.00039 0.028 14.9 0.4 1 23 1626 1649 1626 1649 0.95

4 8 0.003 0.22 12.1 0.8 2 23 1658 1679 1657 1679 0.97

5 8 0.047 3.4 8.3 0.3 1 23 1686 1709 1686 1709 0.96

6 8 1.9e-05 0.0013 19.0 1.4 1 23 1715 1737 1715 1737 0.97

7 8 9e-06 0.00066 20.0 0.4 1 23 1742 1764 1742 1764 0.99

8 8 0.011 0.79 10.3 3.4 1 23 1770 1792 1770 1792 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0051	0.38	11.3	0.2	1	23	1351	1374	1351	1374	0.96
2	8	0.014	1.1	9.9	1.0	1	23	1379	1402	1379	1402	0.96
3	8	0.00039	0.028	14.9	0.4	1	23	1626	1649	1626	1649	0.95
4	8	0.003	0.22	12.1	0.8	2	23	1658	1679	1657	1679	0.97
5	8	0.047	3.4	8.3	0.3	1	23	1686	1709	1686	1709	0.96
6	8	1.9e-05	0.0013	19.0	1.4	1	23	1715	1737	1715	1737	0.97
7	8	9e-06	0.00066	20.0	0.4	1	23	1742	1764	1742	1764	0.99
8	8	0.011	0.79	10.3	3.4	1	23	1770	1792	1770	1792	0.99

Sequence Information

Coding Sequence: atgAGTGCCAACAAGCGACgaagttgcaacagcaacaacagcaacaacaacgataacagcaacagcaacacagctGATCAAATTGATAAGGATGTGCACAGTGAAGAATGCCAAGGAGTGCCAACAATTGATGTTCAACGCTTGTGTCGCTGCTGTGGCAAAGGCGACATGGAATTGCTCAAACTGTTCGAGGAGAGCGCTGCGACGACCAATCAGAAGACACAAACTCAATTTGCGACTGCGCAAATCCGCCAACGCCAAACGACGACAATAGGCGAAAAAGCGAgaacagcacaaaaacaacaacaacaccaacaagaacagcaacagcaagaagaacaacaacagcaagaacagcaacagcaagaaaaacaacaacagcaagaacaacaacaacagcaagaacaacaacagcgcaaaAGTGATAATCCTGTGGAATATGCGCTGAGTGGAGCACACAGCAGCATGGACATTGTGTTAGAGGAGATGATCATTTGGATGCTCAAACCACCGTTGAGTCTGAAACAATCAGCCAACCAAAGCGCCGGCAGACAACTGACAGACGCCAACAACAGCGTGTCGGGGAATGAGCGTTGCGAATTCGAGCGAACCCCGAAATCCCAATCCGAATCCGAACTGAAATCCGATGCGCAGACGAACGCATTCTCGATGCTCGGACTCTTTCCGCCCATCGCTCTCTCCTCATCGCTGGCTTTGATCTCACGTGACGATGGTCTGCCCCAGGAGATTTGTCGTCAGTGCAAGGCGCAATTCATAATGGTTGCGAAATTTCGGCGGCGATGTGTGCGCGTCCAGCAGCGACTACACGACTACGTCCAGGACATGATCGAGCACAAGTCACAGAGGGAGGAGGAGCGCACACAACAGTCACAGAGAAAGCCACCGGCAAATGAGGCGTCCGCGGCAGATTACATGCATCTGCCACAGTCACAAATGGAGCGGAAGCGTCGCCTGGTGCCAAACACGGAATCATCGTCGCTGCCAAAATATACCAAGACTGATGCCGCACAGCTGCTGACGCCGCCCAAGCTGCGGCGTATGCAGTTGCGAGTTCGCAATATGCGCACTGCATCCTTGCCAGCCAGTAAAGTTGAGACTGAAACGGAGCCGGGAGCGAGAGCCACAGAATCGATCAGCGACTGTCGACTGAGCGAGACGAGGCAGCGAACGCCACAGAGATCGCCATATAGAGCGAGACTTATTCACGTGCCATGGAAAACGAAAGCGGCACGCAAACAGATCTCGGAAACGTGGTCCGCGTCCCTCTGTCGAGCGGACTCTGTGACGCCGGAACTGCCCAAAGAGCAGGAGTCAACTAATGGAACGACTGCTTTAGCGAAAACAGCAGCCGAAGCTGGTCCAAATTCATCGGAAGATTTGAGTGATTTGTCGGTGAATGCATGTCGAGGGttcgacaacgacaacggcagcagctcCAATTGCTCCACAATAGTTAGCCCACAGCCAACTACAAATCAAAAGCTCAGGTTCCCACCGAAACGCTGCTCGCCCAGTAAAACTCGTGTTTTGCGGCGCCAGGACAGACGCTGCTATGCGCCGGTCAAGAGGACGAGGCGCGTTTTCAAGAAGGCAAAGGCGACAAGTGATGCAGCTAAGCTTGAGCTGTGCTGCCTAGAGCTGCTAAGCAGTAAAGCAACAGTGGAAACGAAGGCAGTTGACCAAATACCAAACAGCTCTGCGAATGAGGAGCCgaccagcagctgcagcagcagcagtagaacACCCGAAACTCCAGAGATAAGCATAGTCGATGAGCAGGAGAGTAGACTCATTGAGAAAGCAGAGAATGGGATGCCAGAAACAGAGTCAAATGCGCAGCAGGAAGATCCGCAAGTCAGCTCGCCAGTAAGTCGAAGCGGAAATACAGAGGAAGAGCTGCATCCTGATGAGGCTGCGATCAAATGTTCGCCAGAAACTTTAGGCAATGATGCTCAGGACAAGATGTTGATGGAGCAAATGGAAAGCATATCAGAAGAAGTGAAAAGGGCAGAGGGGGAAGTAAATGGAACAGTAGAGACAACGCTTATGAGTCCTGTGCAGCTTGAGGAATTAAGCTCCTCCAGCATGGATCACATGGAGGGAGAGAGACGGCAATCAGTAACGCCCGAGGTGCCAGCCGCTGAGTGCGAGGTAGAAGTGAGCCTAACAAATGAGGAACAAACGTCGGAGCAAATGTCGGAGCAAATATCGGATCAAATGTCGGATCAAATATCGGATCAAATATCGGAGCAAACGTCGGAGCTGATAGTCAGTATACCGCTAGATGCGCTTGGCGAGGATCTACAGCGTAAACTATGCAACGAGTCGGAGCCGGAGCCGGCGCCGGCGACAAATGAGTTAGTCGACGAGTTGAAGAAACCAGATGGGGAGCCCAAGGAGCCCGCGGAAGCGGACGatgtcaacaacaatgagaatgGCGAGAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCGATGCTGCTGTAGCACTCGcaaccaaacaaattgaagCAGAACCCAACGGAGGCGGCGacggtgatgatgatgatatggAGTCACTGGAGAAACTACCTAATCTGCAGcacgaggagcagcagcaacagcaacagcagcagcagccgccacgCGCTTCTGCCAATGCCAGTTCCATGGATTTTTTGGCTGAATTCGAGAAGCATTGCGAAAAGTCGCTCAAGCTGCAGGCAGCTGGACAGGAGCTGGCGGAGGCCAAGCAACAGTTGGCGGTGGAAATGAACGATGTGGAGAATACACTGCACGGCATACTCAATGAGATGCAGGATGAGCATCTCTATACGCCCGTCTGCACGCCCATCGATGAGTTCCTCACGCCAGCCGATTATGCGCCGCCAACGCCAGCATCGCCCAATATCTACGAGCAGCCAGCGGAGGCAGAGCagccactgcagcagcagcagcagcagcaacagcagaaggaGGGAAATCTCTTTGATAGCAGCACTTTTAGTAATGAGCTGATTGGCTTTCAAAATGATATGCCCTGCTTTGAGAATATTGAGTCTACGCCGGAATCGATGGCTGTGCAGCAGAGCCTGCAGCTCGAGCTGACACAGCTCTTCAATGAGCTGCAgccagcacaacaacaacaacaacagcagcagcagcagcaacagcagtcaacacaacaacagcagcagcagcagcaacagttgcagcaggaAACTGTCAGCTATGAGGCACTATATCAAACAGCACCACTTCCtgtcgccaacaacaacaataacaataaattgcaGGTCATACAAATGACGCCACAGGAGACGCTGTGGCAGGCACAGgccgcacagcagcaacagcaaccacagcagcagccgcaggcgacagcagcaacacaactGCAATGGTCTACTGTGGGCGGCTTGGAGGCGATCAAGACGACGCCCAGTCTGGATAATctggacagcagcaacagcaacagcaataacaacaataacaacgacacaACCACCtccaccacaaccaccaccTATTACATTAATGCCAGTGATCTCTatcaaacacaacaacagcagcagcagcagcaacagcctaGCGAGTCTTATGCTTTGCTCGACAGCAATGATAACTATGTgctggaacagcagcagcagcagcaacaacaaccacaacaacaacaacaacaacagcagcctaTTATGATACTCATACAGCAGccggagctgcagcagccagtggCTTCAGCCAGCAATCCGCAGCAGGCACCACTCCACATTAACTACAGCAATGAGCTGCAAGcctatcaacagcagcagcagcagcagcagcaacatccacatcaaccacaaccacatccaaaagcacaagcacatccacatccacaacaacaacaagtacaaaATACAGTATTAGGCTTACCAGCAGTGGTGCCGCCGCCCACTCGCGGTCGCCCGCCCATGTTAAAGTGCCGCTTCTGTCAGAATGGACCGCGCTTCTCGAGCAGTCTGGAGTACAGTCGCCACATCATTGAGCTGCATCCCGCCGTCGCGCCGTTCAACTGTCCGTACTGCCCGCTCGCCTTTGCCGGTCGCAGCAAGCGCAACCAGCACATCCTCAGTAGCCACATGGTGCAGCAGTTTCACTGTGGCCAGTGCTCGCAAATGTTTCCCTCGCAGCGTGCGctcgatttgcatttgcagcgaTTACACATGCCACTCGCCACGGAGCCGAcgtcggcatcggcatcggcatcgagTGGCACACAATCAGCTGGTGTCCGTCTAGAAGAGGTTCAACTGCGGATTGCCACCACCAAtgatctgcagcagcagcagcaacagcagcagcagcgacaacatcaGCGCCAACCACTTCAGCAGCAATCAGTTGCACATATGCGTGCATTGGAATTGCAGACAAGCCCATCCAGACCACGCAGGACGCGCATACTGTGCTGCCCGGACTGCGAGGACTGCACTTCGGCCAGCGGACACACTCAATGCAGCGTGCAGCCATACGAGGAGCTGAACACTTTGCAACCACCGCCCACGGTGCTGACGCCGCCGTCGACAATTGCATCGCTGCCGTCGCCGCAGCCGGCGCCGCATATAACGTTGCCGTCACCGGAGCAATCGGAGCCAGACTCGACGACGGCAACGTTGCGGCAGTTCCGCAAACGTTGCACAGTCAACAGCTCGACAACAGCGggggcagcagtagcagctgccacagcagcagcagcagtagcaacaacaacaacagcaacaacaacaatgctaaCAACCACTGCCGCCTCGCCATCGCcgtcgtcatcgccatcgtcgtcgACAATGGAAACAACAAGCGCCACACTGCAACTGGGCAAACTGCGTGGCACCCATCCGTGCGTCATCTGCGAGAAGCGTTTCACCAACGTTATTGCGCTGCGAAAGCATCAGCAACTGGCCCACGATTCACAGACGACGATGCCGTGGGTCTGTTCGATCTGCAAGCGGGGTTATCGGAAGCGCACCGATATGGATAACCATATGAAGTCGCATGAGCCGAAGGGTCGACCCTATGAGTGCAACGAGTGCTGGGTGCGCTTTCCGGAGTTCAAGCAGCTGGCGATGCACAAGTTCACCGTCCACGAACTGATCAAGCCGCACACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGTGCGAGGCTTCGAGTGCGAAGAATGCGATGAGGCATTCGCCTACATCAAAGATTTGCGCAAACATCGTCGAACCCACAACAGCGAACTATTTTACAAATGCGATTACTGTCCGCGCACGTTTCTACATTTTACGCCCTATCGCGTACATATGAACACCCACCTGCCGCTGGGTGTGTTCCTTAACGACAAGATGCCCAGTAGCGTATGCAGCAAATCGGAGAATCCATCAAACACTGAAGAATCGCTGCTGCCATTGACGCCGCTGAGCAACTGCAATGGaaacagtggcagcaacagtggaTTAGAGGACTGTCCCGGCTCTGTGGAGATGGTTGTGGAGAGCAGCATGGCGGCGCCATCTTTGGACATGATTGTAGATACGCCATAA
Protein Sequence: MSANKRRSCNSNNSNNNDNSNSNTADQIDKDVHSEECQGVPTIDVQRLCRCCGKGDMELLKLFEESAATTNQKTQTQFATAQIRQRQTTTIGEKARTAQKQQQHQQEQQQQEEQQQQEQQQQEKQQQQEQQQQQEQQQRKSDNPVEYALSGAHSSMDIVLEEMIIWMLKPPLSLKQSANQSAGRQLTDANNSVSGNERCEFERTPKSQSESELKSDAQTNAFSMLGLFPPIALSSSLALISRDDGLPQEICRQCKAQFIMVAKFRRRCVRVQQRLHDYVQDMIEHKSQREEERTQQSQRKPPANEASAADYMHLPQSQMERKRRLVPNTESSSLPKYTKTDAAQLLTPPKLRRMQLRVRNMRTASLPASKVETETEPGARATESISDCRLSETRQRTPQRSPYRARLIHVPWKTKAARKQISETWSASLCRADSVTPELPKEQESTNGTTALAKTAAEAGPNSSEDLSDLSVNACRGFDNDNGSSSNCSTIVSPQPTTNQKLRFPPKRCSPSKTRVLRRQDRRCYAPVKRTRRVFKKAKATSDAAKLELCCLELLSSKATVETKAVDQIPNSSANEEPTSSCSSSSRTPETPEISIVDEQESRLIEKAENGMPETESNAQQEDPQVSSPVSRSGNTEEELHPDEAAIKCSPETLGNDAQDKMLMEQMESISEEVKRAEGEVNGTVETTLMSPVQLEELSSSSMDHMEGERRQSVTPEVPAAECEVEVSLTNEEQTSEQMSEQISDQMSDQISDQISEQTSELIVSIPLDALGEDLQRKLCNESEPEPAPATNELVDELKKPDGEPKEPAEADDVNNNENGENFCQSATADSFDAAVALATKQIEAEPNGGGDGDDDDMESLEKLPNLQHEEQQQQQQQQQPPRASANASSMDFLAEFEKHCEKSLKLQAAGQELAEAKQQLAVEMNDVENTLHGILNEMQDEHLYTPVCTPIDEFLTPADYAPPTPASPNIYEQPAEAEQPLQQQQQQQQQKEGNLFDSSTFSNELIGFQNDMPCFENIESTPESMAVQQSLQLELTQLFNELQPAQQQQQQQQQQQQQSTQQQQQQQQQLQQETVSYEALYQTAPLPVANNNNNNKLQVIQMTPQETLWQAQAAQQQQQPQQQPQATAATQLQWSTVGGLEAIKTTPSLDNLDSSNSNSNNNNNNDTTTSTTTTTYYINASDLYQTQQQQQQQQQPSESYALLDSNDNYVLEQQQQQQQQPQQQQQQQQPIMILIQQPELQQPVASASNPQQAPLHINYSNELQAYQQQQQQQQQHPHQPQPHPKAQAHPHPQQQQVQNTVLGLPAVVPPPTRGRPPMLKCRFCQNGPRFSSSLEYSRHIIELHPAVAPFNCPYCPLAFAGRSKRNQHILSSHMVQQFHCGQCSQMFPSQRALDLHLQRLHMPLATEPTSASASASSGTQSAGVRLEEVQLRIATTNDLQQQQQQQQQRQHQRQPLQQQSVAHMRALELQTSPSRPRRTRILCCPDCEDCTSASGHTQCSVQPYEELNTLQPPPTVLTPPSTIASLPSPQPAPHITLPSPEQSEPDSTTATLRQFRKRCTVNSSTTAGAAVAAATAAAAVATTTTATTTMLTTTAASPSPSSSPSSSTMETTSATLQLGKLRGTHPCVICEKRFTNVIALRKHQQLAHDSQTTMPWVCSICKRGYRKRTDMDNHMKSHEPKGRPYECNECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGVRGFECEECDEAFAYIKDLRKHRRTHNSELFYKCDYCPRTFLHFTPYRVHMNTHLPLGVFLNDKMPSSVCSKSENPSNTEESLLPLTPLSNCNGNSGSNSGLEDCPGSVEMVVESSMAAPSLDMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00576613;
90% Identity: iTF_00518707;
80% Identity: -