Dneo002617.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila neoperkinsi
Gene Symbol
JARID2
Assembly
GCA_037043555.1
Location
JBAMBG010001741.1:21860-30593[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.1e-22 1.5e-18 67.0 0.0 6 89 2073 2154 2068 2154 0.92

Sequence Information

Coding Sequence
ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGTAAGGAAACAGATACGCCGCCAACGTCATCGTCCGCGGcgtcggcggcggcagcagcagcagcactggctGTGGAGTCATCACCCGAGATGCCCAAAAGAACGAAGGTGCAGGCACAGCGTAAATTCGCACAAGGCCAGAGTGCGCCCAATTCAGCCGGCGGTGGTGCATTCAACGCTGCCAGcgttgcagcagccgcagcagcagcagcaacagcggcggcagcagctgcagcaacagcatcggGCTCCTCATCGTCTGCTGGACCAAGCACATCGACAGCGGACAgcctgcaacagcaacagccaccgATTGAGATATTGCCGAATCAGCGACCGAAACCGCAGGATTTTCTAACGTTTCTCTGCTTTCGCAGTTTTCAGGGCAAACCCAAAGCCAATGATGCAGGTGCTCTTCCGCCCAGCAGCGATgctgtcaacaacaacaacaccaccaacaacaacaagaagaacaacagcagcagcagcaaaaagaagcGCGGCCGACCGGCCAAAAAACCAGGCACGGAGCAGATGCCAACAACGACTAAAACAGCAAGTGATAAAATTGAAGCGGCAGCGACGCCAACGCCTCCTCCGCCTGCCCAATCTCAGCCTCAgtctctgctgctggctggaGCAGTGCGTAAGCGTGCCGAGGTTGTTGCCGAGGGCAATCGACGAGGCGGACGACGTCAGGAGACTTTAAAGCGTCGCTCGAATCGCGCCGGCAACAAGGAAAAAGATGATGAAccggagcagcaacagcggcagccggcgcagcagcaacagcagcagaataaTGCAGACGGAGACCATGttgaggaggaggcggaggatGACGAGGAGGATGAATTCTTTTCGGCGCATGATGCCAGCTCGCGTAATGGTGGCGCCGCCGCCGTTGCCGATGAGACGCTCTCCAAGTCGGAGACAATGCAATCAAATACAAGACGTGGTCGTGGCAGAAAATCTGTTGTGGCAGTAACAGCAGACTCACCTGTTGCAACCAACGAGAGCAGGGCCagcaaggagaaggagaaggggCCCGTGAAACGTTTGCGTCAACAGCGTGAATCACCAATTTTCATACCCTCCCCGGAATCATCGGGACGCATGACGCGACAGCGTGCTTTTTTTGAGCCTGTCAAGGTGCCGCCAAAGCAAGAGCCGTCAGAAGTGGAGGAGAAGCACGAGGTCGAGCAGGAGCAAGAGCTGaaggaacaaaaaaagagcaagGAAAAGGAGCAGCAtaagcaggagcagctgcagaaacagtcaacggcagcagcagcagtcgagcccaaacagcagcagcaacagcacatcAAGGAGAAAATCAACTCGAGCATTTATGCCAAAGATGCGGCCAAGCTAGAGAATGGTGTCACCACAGCGacagctgctgcggcagcggaGCAACAAAAGGGCCTCAACGTCTTCGATTTCAGCTCCGATGATGAGCAGCCGCTGGCCAAGGCCATCAAGCTGAAAAAGGGCGGCAAAAAGTCGGCAGTGAGTGCGGccggaggagcaggagcaactgctgcagcagctggaacAGCAAATGCACGCGGTCGCAAATCAGCCGGCGGCGGATCGgcaaaaaagcagcagcggctggaggaaaaggaaaaggcagcagtggcagcaactcCGCCTGAAGAGCCGTCAAAAACAAAGCGTGGCAagccattaaaaaagaaagcagcCGAGCCGGAAAACGACGAGCAGGGGGTGGACGCCGAGGAGTCCGATTTAAGTCCACCCTCGcccaaaaagccaacaaacaataataatgcacGTCCCGTGCGTCGTCAGGCGGCACAGCTGAAAGTGCAGCAACGCTCGCGGAGTCCAagtccgcagcagcagcagcgcagccagCGTCCGTCGCGTAAGACGAAAGAAGCGGCTGCCATCTACATGGGCATCATTGGGCACAAGTTGCAGCTGgcggacgacgacgacgatgatctGTCGCTGAGCAGCTTCCCAGACATACCCAATGTCAAGCAAATGGAGAAAATGGAGAAGGAGATTAAAAAGAATGCGGCGGGCAAACAGGCAAgcaaaccagcagcagcagcagcagcagcatcagtagcaacaacaaaaacaacagcagaagtaacagcagcagcagcagaaggagcagaagcagtaggatcagctgctgctgctgctgctgcagttgagcCAACAACTgaaacgccagcagcagcaggagcgcCGCCGGCACCTCCTCCTGCACCGCGACGCGGTCGACCGCCCAAGCAAGCAAAAGcagctgcaggcaCAGTCAAGCCTCAGATTGAGGGCATGCTGGTGAAGAAAGGCGCACTGGCGCTGGCCAAAGCAAAGTccgaacagcaacaaaaaaaccaacaacaacaagaacagcaacaacaacagcagcagcagcagcaacaacaaaaggtcGACTCCGATGCAGAGGAGGATTTTTTAATCAACGAGGAGCTAAACGAAACGAAGCGCAAGCTTGAGAAGAGTTTCAGTGACTCGGATGATGAGCCGCTGGCAATTAAAgtgccaacagcagcggcagcagcagcagcagcagcaacaacagttgcaacaacaacagcagcaacaacagttgcaacaacaacaacagcagcagcaacaacaacaacaacaacagccaaagccagcaacagcaacagcaaaacggaaacagcagcaacaactgtgactcaaacaacgacagcaacaactgtagcaacaaccacagcagcaacaactacagtaactgcaacagcagcaacaactacagcagcagtagcagcaacaacaactgtcgcagcagcagcagcaacaacaacaactgtagcaggagcaacaacaactgcagcagcagcaacagcagctacttTAAAGCCACCACAACTGGGCGCTGCAACAGCCACGCCCATAACGCCATTAACCATGCTGCCGCTGACAACAAAGCCCAGCCCATTTTCCATATCGCCACCGAGCTATGCATCCGCAGCAGCCACACTAAAAGCAATGGAAAAGAAATCACCCGTGCCCACCTCGAAGATCTTAAATGTGCCTGCCACGTATGCGTTGCCCGGCAGCGGAACAATTGGCATGGGTGTGGGTGCCGTTGGTTTTGGGAAGAGCACATCGTATTTGCCGCAGGCATCCCCACACTATCAATCCCCGTATGTGCGTCCGCCGACGTTTTGTGCCGCTGCAGGTGCGGCTGCTGCCATTGGCAATAAGACGCCGCatccgcaacagcagcagcaacagttgctggcagcgacagcagcggcggcgggtGCGGGTGCAACAAGCACAGCCCAGCAGACATCGACACCCCTCAAATATCAAACGGCGCCCACAATCTATCCGCCACCCATCGAGGCGTATCAGTGTCCCAAAATCAATCCCAATTTTCTAACGCCCAAATATGATCGGGCGAGCATTTTGCCGCGtgtcaataacaataataatgcgGTGACCATTAGCAATACGAGCGGCAGCAATTTTACGGCGCCAACAATTGCAAGGCCAACGCTGAGCACACTGGCCACGCCTACGACAcacgctgctgttgcagcggcggcagctgcaactgttgcaacaaaGGCAACGACTGCCGTTAGTCAAAGTCTTAGTTTGACCATAACTCCAACGCCGCCAGCTGTGGCatccacatcagcagcagcagcagcggccgcacaacagcaacaacaatcacaacagcagcaacaacagcagcagtcgcaacaacaacaatcacaacagcagcagcagcaacaacagcagcagcaacagccacatccacaacaacaatcgccCGCGTTGACAATGACACCAACGAcgagcaccaacaacaattcgGATCCGTTGAAAGATGAGATTGGCAGCATTTTGGCACAGGCAACACTCATGCCCAGCAAGGAGGAGTCGGGCAAGATCTTTGGCATTGCCAGCGTGAGTCTGGCACAAAGTTCCGGGCCGGATAACACCAAGTGTACGCTCGGCAAATGTGGATCGATACACAAACCGGTGCTGGGACCCGTTGTGCCCACAGAGGCCTACTTTGGCGATCAGTTGTCGGGCAAGGAGCGTCGCAAGGCCAAGGTGAATATGACACATGAACAGATCCAAAAGTGGCTCATCGAGTGCAGCTCGAATCCCGATGAGATCCAGGATGATCTCGATGATGAGTACGACGACAGTTTGAGGCCGCAACAGTCACAAACGCCGCCGGGTCCGACGCGTGACGATAAGGAGAGCACCAGCTTCAGCAGCTCCTCGAAGAATACACGCGGCGAGCTCGGCAAAAGTGAGAGTGCCTGGTCCGCCAAGGGGCCATCCCTGAAAGCGACACCGGTCCTCGTCagcgcagcggcagcggcaacagcagcagccgcagcagcagcagcagccaatcTGCGTGATACTGTGGACACTGAATCGGATACCATGGACTTGGATAAGTGTGTGACGCCAGTGAATCTCACCCAGAAAAAGGAAGTGTcggctgccgcagcagcagcaggagcagcagtcgccaacagcagcagtgatAAAAGGAAGCCGAAGAATGCTGTCaaagcaacagttgctgctgctgctgctgcaggggGTGCAACTGGCGGCAACAATAAGCGAGGtggtggagcagcagcagctgccaacaAACGCCTTGCGGCTGCCACAAAGCTGTCGACGCCAACGCCCaccaatagcagcagcaatacgcCCACctcagcaacggcaacgacaacaacactgacaacaacaacaatgtcagCCAAACGAACGCCCATCTATCAGAGCAGCCCAGGCAAAGCCAAACTggacaacaacatcaagaagcagcagcagcaacagcaaaagttgcCAGCCAAAACTTCAGTTTATGCCTTTGGCAAGGAAGAggagacaacagcaacaacagcagcagcagcaactgtaaagaaaacagcagcaacagcaaccgttgctactgctgctgctgctggcaacaagGCGACAAATCGTCGCCGCAATCTTGAAGtggaagcaacagcaacaaaaactgcaaCGCCGCCGCCAGCGTTAAGCGAACGTTCGCCGACTAAAAAGCGTGCGGCTgccacagcggcagcaacagccgtGCAACTGACGCTCAGCCCAACGGATAAGCTCGAGAAGCccaaggcagcagcagcagcagcgcgcaagaaacaacagcagcagcagcaaaagcaacagcagcaaaaggagcaacaacagcaaaaggagcagcaacagcaaaaggagcagcaacagcaaaaggagcaacaacaacagcaaaaggagcagcagaaggagcaacaacagcagcagcagcagaaaaagacagcaacaaccgtagcaggagcaacagcaaccagtgCTGGTGGAGATTCGGATGCAGAGGGTGCCACCTTTTACATACCCCTATTGCAAGGCGCCAGCAGTGGCGATGGTGGCATTCAAGGTGTTGCCGTTAAGCTGGGACGCGAGGGACCCGATGGACCCAATCAAAAGGTGGTGATGCAAGCGACGCTCGTGACCAAGGCGCAAATGGACACGAACTCAGCGAAGCCACTGCCCGACAATGAGCAGCTGGTCAAAACGCTGCTCAATGCGGCCAATACAAACACCAATGAGCCAACTACGcccagcaacaatagcaacagcttAAAAGCCAGcacctcagcagcagctgcagttgcagttgcagcagcagccgcagccgcagcaacgggagcagcaacaacaactgcatccGGTAATCTAGTCCGCGTCAATTCCAATTCATCACTCTTCTCTGGCTCAGCAAAATCCCGTacagctgccactgctgcagcagctgctgcgatGGCTGCCACGAATGCGCTGGCCAAAAAGTACAAAGATGATACGCCCATTAAGATGGCCAATAATACCGCGTTTCCCAGACACGATGATCCCACACAAATGGTCGAGGCGCCCATTTTTAAGCCCACCGAAAAGGAGTTCGCTGATCCCATTGAGTTCATTGAGCGGATCACACCAATCGCCGCGAGATTTGGCATCTGTAAGATAATACCGCCCGCCAGCTTCAAGCCGGAGTGTCGGATTTCGGATGAGATGCGATTCACGGCGTACAATCAGTATGTGCACAAGATGCTGCATCGCTGGGGCCCCAGTGCCAAGGAGTTGAGTGCCATCAAAAAGTATTTGGCTACGCAGAGCATTGTGATGAATCATGCGCCCTGGATTGGTGGCATGGAGGTGGACTTGCCGCGTCTCTATCACACCGTGCAGGAGCTCGGCGGCCTCAAGGAGGTCATCGAGAAGAAGAAATGGGCACGTGTCGCCGAAGAGATGTGCATACCAAAGCTCGCCCAGGATCGGGTCACCAAACTGGATGACATTTACTGCAAGTACTTGTTGCCCTACGACACCCTCTCCCCGGCGGAACGGCAAAAACTCTTCGACGAAGTCGAAGCGGATTGGGCCAAGCGAGAGGCACGCGCCCGTCGCAATGCGGATCGTTTTGTCAATTCAACGGAGAGCGTTTCCAATGTCGAGGATGATCTGTCCACCGATGAGGATGATGAATCGGAGGAGGAACTCGACGGTGTCTCCATGGAGTGCATTGTCAAGGGTCGCAGCATGCCGCTCAGTCAATTCTATCGGATTGCGCGCAACACAATGGCGCTGTGGTTCAAGAGCACCGATCCTACTGTTAACGAGGTGGAGGCGGAATTCTGGCGACATGTCGCCGTCCGCGAtagtcatgtgtgtgtgcattccGGCTCCATTGATAGCTCCGGCTGGGGATATGGTTTCCCGAGTCCGGGTCCCAAGGGCAAGGGTTCGAATTATGCGCGTCACCCCTGGAACCTGAAGGTGCTCACAAATAATGCGGGCTCCGTGCTGCGCTCGCTGGGACCTGTTATGGGCGTCACAGTGCCCACACTCCATGTGGGCATGCTCTTCTCCGCCTGCTGTTGGTATCGGGATCCACACGGTCTGTCCTGGATCGAGTATTTGCATACGGGCGCCTCCAAGCTCTGGTATGGCATACCCGACGATCAGAGTGCCAATTTCCGGGCGGCGCTCACTTCTCTGATTCCGACGCACTGTCAGAACAAGACCATTTGGTTGCCCTGTGATACGGTGATGGTGCCGCCGCACATGCTCACCGATCGCGGTGTCTCACTGTGCCGCATCGAGCAGAAACCGGGCGAGTTTATTGTTGTCTTTCCGCGCGCCTACACCTCCAGTCTGGCCACCGGCTATGTGGTCTCCGAGAGCGTTTACTTTGCCACCAACTCATGGCTGGATCTGGCCAAGGATGACTTTAGGGACATCCATGAGAGCTGTGAGCCGGCTATGTTCtcgctggagcagctgctctTTGCTTTGGGCTACGATCAGCGCGTCAATTCAGACACATTGCATCAGATGCTGCCCATGCTAAACGATGTCTGCGAGAAGGAATCGGCGGCACGTGAACAGCTTAGAGCCGCGGGCGTCACAGCCAGCGAAAAAGTGCAGGCGGAGAAGGGACAAAAGGGGAcgaagaagcaacagcagccgccccACAAATCCATCGATAGCGAATGCGATCTGTGCCGTGCCAATCTGTACATATCGATGGTGCGCACCGATGATGGCAACATCTACTGCTTGCAGCATGCCCTGAAGAATATCAACAGTGGCAATGTGCAACCGAAAATGTGCAAACTGGTCTACGCCTACAATGTGGACGATGTGCAGCAACTGATCCGCCAGTTGCAGGAGAAAATTAATCAGATGCATCACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence
MVVSKDNKRRRKETDTPPTSSSAASAAAAAAALAVESSPEMPKRTKVQAQRKFAQGQSAPNSAGGGAFNAASVAAAAAAAATAAAAAAATASGSSSSAGPSTSTADSLQQQQPPIEILPNQRPKPQDFLTFLCFRSFQGKPKANDAGALPPSSDAVNNNNTTNNNKKNNSSSSKKKRGRPAKKPGTEQMPTTTKTASDKIEAAATPTPPPPAQSQPQSLLLAGAVRKRAEVVAEGNRRGGRRQETLKRRSNRAGNKEKDDEPEQQQRQPAQQQQQQNNADGDHVEEEAEDDEEDEFFSAHDASSRNGGAAAVADETLSKSETMQSNTRRGRGRKSVVAVTADSPVATNESRASKEKEKGPVKRLRQQRESPIFIPSPESSGRMTRQRAFFEPVKVPPKQEPSEVEEKHEVEQEQELKEQKKSKEKEQHKQEQLQKQSTAAAAVEPKQQQQQHIKEKINSSIYAKDAAKLENGVTTATAAAAAEQQKGLNVFDFSSDDEQPLAKAIKLKKGGKKSAVSAAGGAGATAAAAGTANARGRKSAGGGSAKKQQRLEEKEKAAVAATPPEEPSKTKRGKPLKKKAAEPENDEQGVDAEESDLSPPSPKKPTNNNNARPVRRQAAQLKVQQRSRSPSPQQQQRSQRPSRKTKEAAAIYMGIIGHKLQLADDDDDDLSLSSFPDIPNVKQMEKMEKEIKKNAAGKQASKPAAAAAAASVATTKTTAEVTAAAAEGAEAVGSAAAAAAAVEPTTETPAAAGAPPAPPPAPRRGRPPKQAKAAAGTVKPQIEGMLVKKGALALAKAKSEQQQKNQQQQEQQQQQQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAAAAAAAAATTVATTTAATTVATTTTAAATTTTTTAKASNSNSKTETAATTVTQTTTATTVATTTAATTTVTATAATTTAAVAATTTVAAAAATTTTVAGATTTAAAATAATLKPPQLGAATATPITPLTMLPLTTKPSPFSISPPSYASAAATLKAMEKKSPVPTSKILNVPATYALPGSGTIGMGVGAVGFGKSTSYLPQASPHYQSPYVRPPTFCAAAGAAAAIGNKTPHPQQQQQQLLAATAAAAGAGATSTAQQTSTPLKYQTAPTIYPPPIEAYQCPKINPNFLTPKYDRASILPRVNNNNNAVTISNTSGSNFTAPTIARPTLSTLATPTTHAAVAAAAAATVATKATTAVSQSLSLTITPTPPAVASTSAAAAAAAQQQQQSQQQQQQQQSQQQQSQQQQQQQQQQQQPHPQQQSPALTMTPTTSTNNNSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYFGDQLSGKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDEYDDSLRPQQSQTPPGPTRDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSAAAAATAAAAAAAAANLRDTVDTESDTMDLDKCVTPVNLTQKKEVSAAAAAAGAAVANSSSDKRKPKNAVKATVAAAAAAGGATGGNNKRGGGAAAAANKRLAAATKLSTPTPTNSSSNTPTSATATTTTLTTTTMSAKRTPIYQSSPGKAKLDNNIKKQQQQQQKLPAKTSVYAFGKEEETTATTAAAATVKKTAATATVATAAAAGNKATNRRRNLEVEATATKTATPPPALSERSPTKKRAAATAAATAVQLTLSPTDKLEKPKAAAAAARKKQQQQQQKQQQQKEQQQQKEQQQQKEQQQQKEQQQQQKEQQKEQQQQQQQKKTATTVAGATATSAGGDSDAEGATFYIPLLQGASSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSAKPLPDNEQLVKTLLNAANTNTNEPTTPSNNSNSLKASTSAAAAVAVAAAAAAAATGAATTTASGNLVRVNSNSSLFSGSAKSRTAATAAAAAAMAATNALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNVEDDLSTDEDDESEEELDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNDVCEKESAAREQLRAAGVTASEKVQAEKGQKGTKKQQQPPHKSIDSECDLCRANLYISMVRTDDGNIYCLQHALKNINSGNVQPKMCKLVYAYNVDDVQQLIRQLQEKINQMHHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00542223;
90% Identity
iTF_00497935;
80% Identity
-