Dnen009465.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- nfx-1
- Assembly
- GCA_005889595.1
- Location
- MRUE01000956.1:2181-3743[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0021 25 5.4 19.2 1 18 6 23 6 24 0.97 2 12 1.6e-08 0.00018 21.8 14.7 1 19 33 51 27 51 0.90 3 12 0.61 7.1e+03 -2.5 0.7 6 10 79 83 78 83 0.87 4 12 2 2.3e+04 -4.6 1.4 9 11 88 90 87 91 0.76 5 12 2.1e-05 0.25 11.8 7.5 9 19 96 106 94 106 0.89 6 12 0.0018 21 5.6 5.5 1 11 118 127 118 128 0.95 7 12 0.43 5e+03 -2.0 1.4 6 10 183 187 182 187 0.88 8 12 1.7e-06 0.02 15.3 4.9 1 11 193 203 193 204 0.96 9 12 2 2.3e+04 -6.0 5.9 1 10 217 224 217 224 0.78 10 12 0.0012 14 6.2 11.9 4 18 234 248 232 249 0.94 11 12 0.67 7.8e+03 -2.6 0.5 8 11 254 257 253 257 0.81 12 12 3.3e-07 0.0039 17.6 10.1 1 16 301 315 301 321 0.92
Sequence Information
- Coding Sequence
- AAACAGATGCGTGATTGTGGCAAGCATGGTTGCAATCGCAAGTGCTGCGGTGATCAGTGTCCGCCGTGCGAAAAGATTTGCGGCAAGCAATTGAGCTGCAACAAGCACAAGTGTCAGTCCGTCTGCCACAATGGACCGTGTTATCCCTGCAAACTGGAATCGCAGGTTAACTGTCGCTGCGGCAAGACGCGACGCAATGTGCCGTGTGGTCGGGAAAAGAATGCACGCATTGCCTGCCCCGAGCTGTGTCGCATCACAGCGAAATGTCATCATGCCATCAAGCATCGTTGCCATAAAGGCGAATGCCCGCCCTGCACCCAGCCATGTGGATTGCCCAATGACTCGAGCGGCTGTGGACACATTTGTCAGGCGCGTTGTCATGCCGCCAACCGGGTGTTAAAGCCAACGGATTCACGTGCAACACGTGGCAATAAGTATGAATATCGCGCATTGCCCCATCCACGTTGTGAGCAGGGAGTTGTTGTCACCTGCATTGGTGGCCATGAGGTTGCCACTTGGCCGTGTTGGAACTCAAAGCCCACATCATGCCAGCGCAAGTGTGCACGACAATTGAAGTGTGGGAATCACAGTTGCGAACTCGTCTGTCACGCCGTGCCAAATCCCCAGGatatgcaacagcagctgggtTGTGGCAATTGCGAGCAAGGATGTGACATTGCTCGGCCAGCAGGTTGTGTACATGCTTGTGCCAGAGGCTGTCATCCGGCGCCATGTGCACCATGTGCTTCGGTCATCAAGCAAAAATGCCACTGTGCTCTCAATCAGATTGTGTACAAGTGCAGCGAGTATTACAGCGAATTCAACACTGAGGAAAGCATTGTGTCGGAGCTTCGCGAGAAACTGCGCAGCTGCGGCAATCGCTGCATCAAGAACCTTGGCTGTGGGCATCGCTGTATGGCCATATGCCACTCGGGCAAGTGCCCCAATCCGCAGCTGTGTCGGAAAAAGGTGCGCATATACTGCAGCTGTAAGCGTATTAAATTGGAGGTTGCCTGTGACAAGCATCGAGCTGGTCTAACACACTTGGAATGCGATGAGAATTGTCAGGCCGAACGATCAAAGGCCCAGGCGACGGAGCAACAGGAGCTGGACCTGCGATTGCGTCAGGAGGAGGCAAAGAATAAATTGGAGCTGGAAAAATTCGAACAAAAGTTCGGTAAACGCAAGCCTAAGGAACGCAAAGCTGTGGATGTTGAGCctaccaaattaaatatagattGGAAACGTGTGGCCATCTATGCGGCTTTTGTACTGGTTGTGGTGGGCGCTATGGCCGTAGCATTCTATGCGGATAGTTAG
- Protein Sequence
- KQMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRNVPCGREKNARIACPELCRITAKCHHAIKHRCHKGECPPCTQPCGLPNDSSGCGHICQARCHAANRVLKPTDSRATRGNKYEYRALPHPRCEQGVVVTCIGGHEVATWPCWNSKPTSCQRKCARQLKCGNHSCELVCHAVPNPQDMQQQLGCGNCEQGCDIARPAGCVHACARGCHPAPCAPCASVIKQKCHCALNQIVYKCSEYYSEFNTEESIVSELREKLRSCGNRCIKNLGCGHRCMAICHSGKCPNPQLCRKKVRIYCSCKRIKLEVACDKHRAGLTHLECDENCQAERSKAQATEQQELDLRLRQEEAKNKLELEKFEQKFGKRKPKERKAVDVEPTKLNIDWKRVAIYAAFVLVVVGAMAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -