Dnen007599.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- GATA6
- Assembly
- GCA_005889595.1
- Location
- MRUE01012849.1:1308-3765[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.21 8.3e+02 0.1 0.9 1 15 176 187 175 200 0.59 2 2 1.2e-17 4.9e-14 52.0 6.9 1 34 227 259 227 261 0.97
Sequence Information
- Coding Sequence
- GGACGCTTCACCACCGCCAGCGGTGAGCCAGAGCCAGCTGGTGGAAACCTGTACTACGATTCACCTGTGGTGGATGCCAGTGTCCATGCGAATGAGGCCAAGACCTATGCGGATCTGGGCAGTGCCTACGCGCCCTTTCCTCCCAACTCGACgttcagcagcaacaactatgcGGCAACGTTGCAGCAAGGCAACACTGTCTACAGTGTGCCTGGCACCGGTCAATTCCTGACCAAAACGGATCCCAATTTGAATCCAATAAGAGCCACTGCAGCGGGCAACTACCAAACCATCTCCTTCTTGGACAGCACTAGTGTGAACGATCCGGCACTGTGGACTACGGCCGGTACGGAGTATCAGAGTGTGTCATATACGAACTATCATACGCAGGTCATCGATGATTATCCGGCCAGCAATATGACGACAGCCCATTGGCCACCAGCCACCAGCATTAGCAGCTTTGATCCCAGCTTGGGTGCCCCCAACACCGCATCGCCGCCGACTCACAGCCTGCAGGAGCTCAAGTGCGACAACTGCCAGACGCCATACATGCGCAAGGGCTCCGACTTGTATTGTCCCGCCTGTCCCAGCTATGGGCGTGTCCTGCCATCTCGCATGCCACAACGACAGAAGCCAAAGGCTGCAGCAGCTCCCAACAATCGGCGCAGCGGCGTCACCTGCGCCAACTGCCAGACGAACTCGACAACGCTATGGCGGCGCAATAACGAGGGTAATCCTGTCTGCAATGCCTGTGGTCTGTACTTTAAGTTGCACAACATGAATCGTCCTTTGTCCATGAAGAAGGAGGGCATTCAGAAGCGCAAACGCAAGCCAAAGAATAATGGAGGACCCATTCCCCATCGGACACTGCCAAGTATGTCACAAGGTGTCAACTTAATGGTGGGCAGCGGTGCGGTGTATCCCTCTCAGGTGCCACTTCCAGGATTGATGAATAGCCAACAGAATGCTAGTCCCGAGCTGCATGATATGACCACAACTGGACCAGCTGGAGGGACGCGTGTGGTATCGATTGCATTGAATGCGACAGTGCCCACGTCATCGGATGGCACACTGAATATGTCTCGTCATCATGTGACGAGCGAGAGTCACTCGCCctacagccaacaacaacaacaacagcagcagcaacaacagccccCGGCACAAAGTCAATCACCGCATCTGCCTAACTCGAGCACGCTAAATCGCCAGATAGCACAGTCtGTTCCGCCAATTGAGAGTGGTCGCAGTTCCAACAGTGAACTGACTCCAAGCGTCATCACAAGAACAGGACTTCCAGAGCGCACATCGAATAACTGA
- Protein Sequence
- GRFTTASGEPEPAGGNLYYDSPVVDASVHANEAKTYADLGSAYAPFPPNSTFSSNNYAATLQQGNTVYSVPGTGQFLTKTDPNLNPIRATAAGNYQTISFLDSTSVNDPALWTTAGTEYQSVSYTNYHTQVIDDYPASNMTTAHWPPATSISSFDPSLGAPNTASPPTHSLQELKCDNCQTPYMRKGSDLYCPACPSYGRVLPSRMPQRQKPKAAAAPNNRRSGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGPIPHRTLPSMSQGVNLMVGSGAVYPSQVPLPGLMNSQQNASPELHDMTTTGPAGGTRVVSIALNATVPTSSDGTLNMSRHHVTSESHSPYSQQQQQQQQQQQPPAQSQSPHLPNSSTLNRQIAQSVPPIESGRSSNSELTPSVITRTGLPERTSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -