Dnen003687.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- bab2
- Assembly
- GCA_005889595.1
- Location
- MRUE01027968.1:1-1286[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.015 50 4.1 0.0 1 11 59 69 59 75 0.89 2 2 1e-18 3.4e-15 55.8 0.0 1 43 87 130 87 132 0.95
Sequence Information
- Coding Sequence
- ATGATTGAGACCGGCGGACATGGCTGGATGGGTGCTCCTGCAACAGGCACATCTGTGGCGGCAGACAGCTACCAATACCAATTGCAGTCGATGTGGCAAAAATGCTGGAACACTAACCAACAGAATCTGGTGCAACAGCTGCGCTTTCGTGAACGTGGCCCCCTCAAGTCTTGGCGCCCCGAAGCCATGGCAGAGGCCATCTTCAGTAATCTGGTGCAACAGCTGCGCTTTCGTGAACGCGGTCCCCTCAAGTCTTGGCGCCCCGAAGCCATGGCCGAGGCCATCTTCAGTGTGCTAAAAGAAGGACTTTCGCTATCGCAGGCTGCTCGCAAATATGACATCCCGTATCCGACATTCGTGCTCTATGCCAATCGTGTACACAACATGCTGGGACCCTCACTTGATGGCGGCACTGATCCCCGACCCAAGGCACGTGGCCGACCGCAGCGCATCCTGCTCGGCATGTGGCCAGAGGAGCTCATTCGCAGCGTCATCAAGGCCGTGGTGTTCCGTGACTATCGCGAGATCAAGGAGGACATGGGTGCGCATCAGTATGCCAACGGACAGGCGCATGGT
- Protein Sequence
- MIETGGHGWMGAPATGTSVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQAHG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -