Dnen016938.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- retn
- Assembly
- GCA_005889595.1
- Location
- MRUE01024516.1:3285-8282[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-19 3.9e-16 59.6 0.0 16 89 5 76 3 76 0.94
Sequence Information
- Coding Sequence
- ATGGGCAACGGCAAAAGCACGCCAATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATACAATTTGGTGATTGCTCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGCGCTGCGTTCACACTGCGCACCCAATACATGAAGTATCTCTACCCATACGAGTGCGAAAAGAAGAACCTCAGCACCCCAGCCGAACTCCAGGCAGCCATCGATGGCAATCGCCGCGAAGGACGCCGTTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTTACGCCCATTTCACGCCCATCACTGCCgggtggcatgcaacaaatgTCGCCACTGGCGCTGGTCACACACgcggcagcagccaacaatCAGCAAGCAGCTGCCGCGGCAGCAGCCGCGCATCGACGATTGATGGGCGGTCCGGCATTTGGCCAAATGCCCAATCTGGTGACACAGGAGATTGAGAATCGCATGATGGACGAAGCGCTGAACCTCTCCGACTCGCCACCGAATCTCAATCTCAGTCACATTAAACGTGAACGCGAACGTGATCCCACACCTGAGCCAGCGGATCATGAGGATGCCGCACATCAGCCGCCGCCAGCCAAACGTGTGGGCAGCGGCCTTATGCCACCCGGCGAGCCAGAGGATGACTATGGCAATGCGGAGCACAATACCACGGGCAATTCGTCGTCGATGCACGATGACATTGAGCCACAGCAACTGAAcggacatcatcatcatcaccatcatcatcagctgcatCATCTGGACAAATCGGATGATTCGGCCATTGAGAATTCACCCAGCACTTCAACAACAGCATCCGCCTCGGGCGGCCATCGCCACAGCTCGCCGGTGTCCACCAAAAAGAAGTGTGCCAGCAGTAAGACGCAGTCCGGTGGCAAGGATGCCGAGCACGAGCACAACAATTGCACTGTGAACGGTGGCGTTGCCAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACTGGCGCCAATGGTGAGCAGCAGTTGATTGTCAACCTGGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGTCCAATGCAACCCGAGTGGAACCCAGAGTCGACGACTCGGACACGCTaaatgcggctgctgctgatgccacGTCCGAGGAGCCGACGGTCGAAGAGGCTGGCAATGCGGTCAAGCATGAGAATAGCCAAGAAGTCAACCAGAACGATGCGGTTGACGAGGACGAGGAAACGGACGAGCAGCCCACGGATGACATTGTAAACGGAatgggagtgggagtgggcgtgggcgtTGGTGGTGGCTCTGTGGGCGTGTCTGTGCTTAAAGATGCTGTGGTCAGTTCGTAG
- Protein Sequence
- MGNGKSTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMDEALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAAHQPPPAKRVGSGLMPPGEPEDDYGNAEHNTTGNSSSMHDDIEPQQLNGHHHHHHHHQLHHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKCASSKTQSGGKDAEHEHNNCTVNGGVAKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVSNATRVEPRVDDSDTLNAAAADATSEEPTVEEAGNAVKHENSQEVNQNDAVDEDEETDEQPTDDIVNGMGVGVGVGVGGGSVGVSVLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -