Dnen011510.1
Basic Information
- Insect
- Drosophila neonasuta
- Gene Symbol
- JARID2
- Assembly
- GCA_005889595.1
- Location
- MRUE01030952.1:1-1751[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-23 2.8e-19 69.7 0.0 6 89 347 428 342 428 0.92
Sequence Information
- Coding Sequence
- gcagcaacaacagttgctggcAAGGCAGCGAACCGCAAACGCAATGCAGCAGACAACGAGACACCAGCAAccactgctgcagcagcagcaacgccgccgccagcgctgAGCGAACGTTCGCCAACGAAAAAGcgtgcggcagctgcagcagcagcaacggcagttCAGCTTACATTGAGTCCAACCGATAAGCTGGAGAAACCTAaggcgacagcggcagcagcgcgcCAAGCgaagaaacaacagcagcagtcggagaagcagcaacagcaagtggAGAAGCAACAGTCTGTGACAAGTCCCGTTGGCTCGGATGCCGAAGGTGCCACCTTCTACATACCGTTGTTGCAAGGCGCCAGCGGTGGCGGTGAGGGTGGCATTCAAGGTGTCGCTGTGAAGCTGGGACGCGAGGGACCCGATGGACCCAATCAGAAGGTCGTGATGCAAGCAACGTTGGTGACCAAAGCACAAATGGACACCAATTCCAAGCCGTTGCCCGACAATGAACTGGTGAAAACCCTGCTCAATGCAGCTACCACCACCAGCAACgatgctgcaacaacaaccacaacagtaacaggcagcaacagcttgaAAGCCAGcacctcagcagcagctgctgcagccacaAGTTTAGTCCGCGTTAATTCCAATTCATCGCTGTTCTCCGGCTCCGCCAAGTCAAGAACAGCGGccgcaacaaccacagcagcagcgaacgCAACCAATGCGGCATTGGCCAAAAAGTACAAGGATGACACGCCAATTAAGATGGCCAACAATACGGCGTTTCCACGGCACGATGATCCCACGCAAATGGTCGAGGCGCCCATCTTCAAACCCACCGAGAAAGAGTTTGCCGATCCCATTGAGTTCATCGAACGCATCACACCGATTGCCGCGCGCTTTGGCATCTGCAAGATTATACCGCCAGCCAGCTTTAAGCCCGAGTGTCGCATCTCGGACGAGATGCGTTTCACGGCCTACAATCAGTATGTGCACAAGATGCTGCATCGCTGGGGGCCCAGTGCCAAGGAGTTGAGTGCCATCAAAAAGTATTTGGCCACCCAGAGCATTGTGATGAATCATGCGCCCTGGATCGGTGGCATGGAAGTGGATCTACCGCGTCTCTATCACACCGTCCAGGAGCTCGGTGGCCTCAAAGAGGTCATCGAGAAGAAGAAATGGGCGCGCGTCGCCGAAGAGATGTGCATACCGAAGTTGGCGCAAGATCGTGTCACCAAATTGGATGACATCTACTGCAAGTATTTGTTGCCCTACGACACTTTATCGCCAGCGGAGCGACAGAAGCTCTTCGACGAGGTCGAAGCCGATTGGGCCAAGCGAGAGGCACGCGCTCGACGCAATGCGGATCGTTTTGTGAACAGCACGGAGAGCGTATCGAACGAGGAGGACGATGTGTCCaccgatgaggatgaggagtCTGAGGAGGAGATCGATGGCGTGTCAATGGAATGTATTGTCAAGGGACGCAGCATGCCGCTCAGTCAGTTCTATCGCATTGCCCGCAACACAATGGCGCTGTGGTTCAAGAGCACCGATCCCACCGTTAACGAAGTGGAGGCGGAATTCTGGCGTCATGTCGCTGTGCGCGACAGTCATGTGTGCGTCCATTCTGGCTCCATTGATAGCTCCGGCTGGGGCTATGGTTTTCCTAGTCCGGGACCCAAAGGCAAGGGCTCGAATTATGCGCGACATCCGTGGAACCTCAAGGTGCTGACCAACAATGC
- Protein Sequence
- AATTVAGKAANRKRNAADNETPATTAAAAATPPPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKATAAAARQAKKQQQQSEKQQQQVEKQQSVTSPVGSDAEGATFYIPLLQGASGGGEGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDNELVKTLLNAATTTSNDAATTTTTVTGSNSLKASTSAAAAAATSLVRVNSNSSLFSGSAKSRTAAATTTAAANATNAALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSTDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -