Dneo008139.1
Basic Information
- Insect
- Drosophila neocordata
- Gene Symbol
- ct
- Assembly
- GCA_018903615.1
- Location
- JAEIGI010000003.1:6941033-6957831[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.9e-27 5.7e-23 80.8 0.0 3 72 777 847 775 852 0.95 2 3 5.9e-32 5.6e-28 96.9 0.0 3 77 1288 1363 1286 1365 0.96 3 3 3.6e-31 3.4e-27 94.3 0.0 3 76 1556 1630 1554 1633 0.96
Sequence Information
- Coding Sequence
- ATGGCGGCAACGGTGTTGGTAGTGATGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGCCTTGGAACAAACTCATCTTGTACAAATCCAAAGGCTTGAGGAACATTTGGAGGTCAAAAGACAGCATATTATGCGCCTTGAGGTTCGTCTCGATAAGCAGCAGATCAATGAGGCATTAGCCGAGGCCACCGCACTGGCAGCAGCCGCTGTCAATAATAACAATAGTCAAAGCAGTGACAACAATAATGTCAGTGCAACGACAACAACCGATGTCCTGCCACATGGAGTTGGAGCAACATCAACACCAGTCAGTAAAATGCATCAACCTCATCTACATCATCGTTTGACTGATGTAGTGCCAACAGATAGTAGCACTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAGAGGACATTGAAATGTCAAATGCCAATGATACAGCACTCTCCTCTATCGATAATGGCAATGAGTTGAAAATCAAAAAGGAACAGCACAGTCCATTGGATTTGAATGTGCTTAGTCCACAATCGGCAATTGCTGCAGCTGCTGCTGCTGCTGCCGCCGCTGCCTGCGCCAATGATCCAAATAAATTCCAGGCTCTACTTTTGGAGCGTACCAAAGCATTTGCTGCCGAAGCCCTTAAAAATGGTGCAGTCGCTGTTATAGCTGCTGGCGCAACTAGCGGTAATTCCGATGCAGCGAATGTAACTAGCGAAGAAATGCCGCAAAAAGCTGAAACGGAAACATCTAAGAATGAAACCAAACCGGAAATAAACACGCATGATGTAAACAATGATGTTGTACATGATGTAAACGATGCTAACGTTAATAATGATGATGAACATGATGTTAAAGGGGAAAAGCAAGAGCCAAATACATTAAAAGAGCGCCAGATTAATACCTATTGGAGGCGTGATAATGAAACAACATCCGCTTCTGCTACTGCAATTACATCAGCATCCAAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTGAAAAAACAAGAGTCAACCACATTGGAAGAGCAGCTGGTTAATAACTATTGGAGGCGTGGCTTTCAAACAAGCCATTTGGATGCCATAACAACAAGCTCTAGTGCATCCACATCCGCATCTGCAACTGCATCCACATCTGCAAACGCATCCAATTTAGCTGAAAGCAAAACGCCAACAAATTATCAAAATGTCAATGCAACAAATATGAAACAGGCTCAGGAATTGTCACCTACCCCTTTAGCACCACCACCACCACCACCACCGCCACCACCTCCTTCTCTTTCTCTTCACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCTGGTGTATCCCATCATGGACATGGCCATAGTCATGGTCATGGTCATCATGGCCATTCCGCTCAGTTGTTACATCAATCAGCGGTTGCTGCAGCTGCTGCTGCTGCCGCTCATCAATTCGATTCGAATTCATCCAGCTCCACCAGTACCCCAAATAGCAGCACCGCCCAATTGGCCGCCAGTATAGCCAATAGCAAATCATTGCTACAAGCAGCCGCAGCAGCAGCCGCTGCCGAGGATAATAATAATAGCTTAACACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGTGCACCCACATTTTTGCCGTTCCAATTTGCCGCTGCCGCTGGACAGGATACACGGGGGCATTATCGTTTTGCCGATTCGGAATTGCAATTGCCACCAGGCGCCTCAATGGCCGGTCGTTTGGGTGAATCTCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAAGAAATGCTACGCTATAATATGGACAAATATGCCAATCAGGCATTGGACACATTGCATATATCGCGACGAGTACGCGAATTGCTATCCGTTCATAATATTGGCCAACGTCTCTTTGCCAAATACATATTGGGCCTGTCACAGGGTACTGTATCGGAATTGCTTAGCAAACCCAAACCGTGGGATAAATTAACCGAAAAGGGTCGCGACAGCTATAGAAAAATGCATGCCTGGGCTTGTGATGACAATGCGGTGATGTTGCTCAAATCGCTGATACCCAAAAAAGATTCTGGTCTCCCTCAATATGCTGGACGTGGTGGTGGCGGAGCTGGCGGTGATGATTCAATGACCGATGAACGTATTGTTCATATACTAAGCGAAGCCTCATCAATGTTTAAGAATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGGATTTAACCCAAGACAAGGTGGCACGTTTATATCAGGAGCTAATGGCACGAGCGCCAAGAGAAGCCGCATTTCCAGGATTCCTGGTACCATCATTGTTTGGCAGTGCTGCCAATATGCCCGGTGCAGCTAATGCATTTCCGGGAGCCAATGCATTCCCAGCTGCCATGGCCGCCGATGAGAATATGCGACATGTTTTTGAACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCACATTCTCCAGTCTGATGGCATTGCAGGTATTGAATGGTGCCCAGGATCTATCATTGGCTGGCAAGGATATCAAATTGAATGGACAACGTGGCAGTTCTCTAGATCATAGCAGCAGTAGCAGCTCCAAAGATGGGGATCGTGATGAAAGTTTCCCATTGATGCATGTACGTAAAACCGAAGGTGGTGGCTCAACACCAGCACCACCAGCACCAGCACCACCAATTGCTGGCCTCTCGTCCAATTCTAGTGGCAATGGAGGTGCAGGACAAACTGGCGTTGCCAGTGGTGGTGCCAGTAATTCATCTGCCCCCAGTCCCTTAAGTAATTCCATATTGCCGCCGGCCTTAAGTAATCAGAATGAGGAATTTGCGGCCACGGCCAGTCCATTGCAAAGGATGGCATCCATAACCAATTCGTTAATAACCCAACCGCCGGTAACTCCACACCATAGTCAACCACAACGACCCACCAAGGCGGTATTACCGCCCATAACCCAACAGCAATTCGATATGTTCAACAATCTGAACACTGAGGATATTGTACGTCGGGTTAAGGAGGCTCTATCCCAGTATAGCATTTCGCAGCGTCTTTTTGGGGAATCTGTTCTTGGACTGTCACAGGGTTCCGTCTCCGATTTGTTAGCACGACCCAAGCCCTGGCATATGTTGACCCAGAAGGGTCGTGAACCTTTTATACGTATGAAAATGTTCTTGGAGGATGAGAATGCTGTCCACAAATTGGTGGCTAGCCAATATAAGATTGCACCCGAGAAGCTAATGCGCACTGGCAGCTATAGTGGCAGTCCACAGATAACACCTGGATTGGCCAGTAAAATGCAAGCCGCCTCACTGCCCATGCAAAAGATGATGAACGAACTGAAGCTCCAGGAGCCGGCCCAGGCTCAGCATATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGCACAAGCAGCCCAGGCAGCGGCCGCCTTGCAACATCATCAGAATATGTTGCTAACTTCTCCTGGCCTGCCACCGCAACATGCCATCAGTTTGCCAGCGAATCCTGGACAAGTGAGTGCCACCAGTACGCCCACTTCATCATCGACAGCTCTGGGTGGCAGTGGAGAGGAGAAGAAACCCATGCTGATGCCAGTTCATGGTGGGGCACATCCGCCTAATGCCATGCGCAGTCTTCATCAGCATATGTCACCCACCGTTTATGAGATGGCTGCACTGACCCAGGATTTGGACACACACGACATAACCACCAAGATAAAGGAGGCTCTTCTCGCCAACAATATTGGTCAGAAGATCTTTGGTGAGGCTGTTTTGGGTTTATCGCAGGGTTCGGTCTCCGAGTTGCTTAGCAAACCGAAACCCTGGCACATGCTCTCCATCAAGGGACGTGAACCCTTCATACGCATGCAGCTGTGGTTGAGTGATGCCAACAATGTGGAACGATTGCAATTGCTGAAGAATGAGCGACGTGAGGCAAGCAAACGCCGTCGTAGCACAGGACCCAATCAACAGGATAATAGCAGCGATACCTCCAGCAATGATACAAATGATTTCTATACAAGTTCACCGGGTCCCGGTTCAGTTGGTTCATCTGTGGGTGGAGCACCGCCTAGTAAGAAGCAACGTGTCCTCTTCTCTGAGGAACAAAAGGAGGCACTTCGCTTGGCATTCGCTTTGGATCCCTATCCAAATGTCGGCACCATTGAATTCCTGGCCAATGAACTAAATCTAGCCACACGAACCATAACCAATTGGTTCCACAATCATCGTATGCGTTTAAAGCAACAAGTGCCACATGGTCAGCCGGGTCAACAGGATAATCCGATACCAAGTCGAGAGAATACCAATGCCACACCCTTCGATCCCGTCCAGTTTCGCATATTGTTGCAACAGCGTCTCGTTGAGTTGCACAAAGAGCGCATGGGCCTAAGCGGTGCACCCATACCATATCCACCATATTTCGCTGCTGCCGCCTTACTCGGACGTAGCCTAGCCAGCATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGATGAATTGCAGGCACTGAATCAAGCATTCAAAGAGCAAATGAGCGGTCTGGATCTATCCATGCCCACATTGAAGCGAGAGCGCAGCGATGACTATCAAGATGAAATGGAAATGATGGAGGCAAGTAGTCGTCATAATATGAGTGATAATGAATCGGTCGAAGGTGGACCAGACAATGAGAGTGTTGGCGATAAACCAATTCCTTCCGATTATGAGAAAGCATTGGCCAAATCGGCCATGGTATCGGCAGCAGCTGCTGCCTATATGAGCAATGTGGTACGCAGCTCTAGACGCAAACCAGCTGCCCCACAATGGGTTAATCCTGCCGGCACAACACCCAATTCCAATACAGTTACTGGAGGAGGCGGTGGAGTAGGAGTAACAACTGCAGCCGATAATGAAAGGATTATCAATGGTGTCTGTGTTATGCAACCATCTGAATATAATCGTAATGATAATGAATCCGAAACTAAATCAAATGAGGCAACCAATCAAGAGAATGAACCAGAAATTGATCATCGTTTCATGGAACCCGAAGTACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCACACCACCAGCCCCTGCCTGGAACTACTAA
- Protein Sequence
- MAATVLVVMIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEVRLDKQQINEALAEATALAAAAVNNNNSQSSDNNNVSATTTTDVLPHGVGATSTPVSKMHQPHLHHRLTDVVPTDSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEDIEMSNANDTALSSIDNGNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKAFAAEALKNGAVAVIAAGATSGNSDAANVTSEEMPQKAETETSKNETKPEINTHDVNNDVVHDVNDANVNNDDEHDVKGEKQEPNTLKERQINTYWRRDNETTSASATAITSASKLXXXXXXXXXXXXXXXXXXXXXXXVKKQESTTLEEQLVNNYWRRGFQTSHLDAITTSSSASTSASATASTSANASNLAESKTPTNYQNVNATNMKQAQELSPTPLAPPPPPPPPPPPSLSLHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVSHHGHGHSHGHGHHGHSAQLLHQSAVAAAAAAAAHQFDSNSSSSTSTPNSSTAQLAASIANSKSLLQAAAAAAAAEDNNNSLTPXXXXXXXXXXXXXXXXXXXXXXLGAPTFLPFQFAAAAGQDTRGHYRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGGGGAGGDDSMTDERIVHILSEASSMFKNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLTQDKVARLYQELMARAPREAAFPGFLVPSLFGSAANMPGAANAFPGANAFPAAMAADENMRHVFERXXXXXXXXXXXXXXXXXXXXXXXXXXPTFSSLMALQVLNGAQDLSLAGKDIKLNGQRGSSLDHSSSSSSKDGDRDESFPLMHVRKTEGGGSTPAPPAPAPPIAGLSSNSSGNGGAGQTGVASGGASNSSAPSPLSNSILPPALSNQNEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQITPGLASKMQAASLPMQKMMNELKLQEPAQAQHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAQAAAALQHHQNMLLTSPGLPPQHAISLPANPGQVSATSTPTSSSTALGGSGEEKKPMLMPVHGGAHPPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELNLATRTITNWFHNHRMRLKQQVPHGQPGQQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLASIXXXXXXXXXXXXXXXXXXXXXXDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDEMEMMEASSRHNMSDNESVEGGPDNESVGDKPIPSDYEKALAKSAMVSAAAAAYMSNVVRSSRRKPAAPQWVNPAGTTPNSNTVTGGGGGVGVTTAADNERIINGVCVMQPSEYNRNDNESETKSNEATNQENEPEIDHRFMEPEVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTPPAPAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555742;
- 90% Identity
- iTF_00555742;
- 80% Identity
- iTF_00555742;