Dneo013502.1
Basic Information
- Insect
- Drosophila neocordata
- Gene Symbol
- kn
- Assembly
- GCA_018903615.1
- Location
- JAEIGI010000019.1:1765774-1769210[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-120 7.8e-116 387.8 0.0 205 385 1 210 1 214 0.99 2 2 2.9e-08 0.00028 19.4 15.4 422 521 213 312 210 332 0.68
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTTGTGATTTCCACACAAGTGGCCGTTGATGGTCCACTGTTAGCGATCTCGGATAACATGTTCGTTCACAACAATTCAAAGCATGGACGACGTGCCAAACGACTGGATACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTTTATCCACCTTTACCTGTGGCCACGCCCTGCATTAAGGCCATTTCACCCAGCGAGGGTTGGACAACAGGCGGAGCCACTGTCATTATAGTTGGGGATAATTTCTTTGATGGCCTTCAAGTGGTGTTTGGCACCATGCTAGTTTGGAGTGAGTTGATCACATCGCATGCCATTCGAGTCCAGACCCCGCCCAGGCATATACCCGGTGTTGTGGAGGTGACGCTTTCCTACAAAAGCAAACAGTTCTGCAAGGGATCTCCCGGACGATTTGTCTATGTCTCAGCACTCAATGAACCCACCATTGACTACGGTTTCCAGCGACTCCAAAAGCTGATACCCCGCCATCCCGGTGATCCGGAGAAACTGCAAAAGGAGATTATCCTTAAGAGGGCCGCCGATCTAGTTGAGGCTCTCTATTCTATGCCTCGATCACCTGGTGGCTCCACCGGTTTCAATTCATATGCCGGCCAACTCGCTGTAAGCGTCCAAGATAGCACCGGTCAATGGACCGAGGATGATTATCAACGCGCCCAATCCAGTAGTGTGAGCCCACGAGGCGGTTACTGCAGTAGCGCCTCCACGCCGCACAGTTCGGGAGGGTCGTATGGAACCACAGCAGCCACAGCAGCGGTGGCGGCAACAGCTAATGGTTACGCCCCCACACCCAATATGGGCACATTGTCTTCATCCCCGGGTAGTGTGTTTAATTCCACGTCAATGTCCGTGTCGTCGACCTGGCATCAGGCATTGGTGCAACATCATCAGGCAGCAGCCGCTGCTGCCACCCATCCGCATCATTATTCGCATCCGCATCAGCCATGGCACAATCCAGCCGTGTCAGCAGCCACAGCGGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDSTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTAATAAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSVSSTWHQALVQHHQAAAAAATHPHHYSHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600097;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00555578;