Dneo001430.1
Basic Information
- Insect
- Drosophila neocordata
- Gene Symbol
- grh
- Assembly
- GCA_018903615.1
- Location
- JAEIGI010000004.1:7202569-7238976[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-24 1.1e-20 74.0 0.1 24 115 467 557 453 565 0.91 2 2 6.3e-36 6.1e-32 110.8 0.2 113 221 605 712 584 714 0.87
Sequence Information
- Coding Sequence
- ATGCAGGATGCTACAAGTCATTTTGCCATTTCGTATACGGATTGGATGTCGGAGACACGACGACCAGACACCAATGGCTATGAACTGGAACCGCAACAGCAGACGCATCCACTTGCACTTCCCACTACCCACCAGTCACACAATCATCATAATCATCATTCCGAGCATATATCCCACTATGGTCATCATTCCTCCAGTTCACCGCCCCGCTACTATGAGCCGGAGCATCTATCAACCAAACAGCAGGATAACGCCCATCTTCCTCTTACTGCTGCTGGCCTTATGCAGGCGGTGGCCGCTGAAATTCAATTGAGTGAACAATCCTCAACCAATGCCTCCTCCTATCCAGTTTATACCACCTACTTTAGGGACGATCATGATCATGAAAAGGAGAATAACAACAATGCCGACGAGGATCATTTGGTATGGAGCAATACCAATAGCTCGGGCAAACTAAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCGCAAAATGAAATTCAAGGCTTTCTGCTTGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGAACCCGAAGACTTGCGCAAGGATCCCAAGAATGCAGCCAATGGTGGAGCAGGTGGAGCAGGCCAAGCGGGTTCGGTCATAACGCAGAAGATTTTGCAAGTGGAAGTGGATGACACAACAGAAGCGGAGTCAAGGCCTTCTTCATTAGATATTCCACATACCACACCAGCTAGTCCCGATACTGATCCAGCCACGACTGATCTAGAATTAGAGATGTATGCTACCACGGGCGGCACACAGATTTACCTACAGGTGACCGATAATTATGGCATGTATACGGCAACAAGATTACCACCAGGTCCCCCGCCCACAACCAGTACCACATTTATAGCAGCTGAGCCCTATTATAGGGAATATTTTGCACCCGATGGCCAAGGTGGCTATACACGCAGTTTGTATGGAGAGGATGTTAGCTCTTTTGACTATACGGAATTATGCCAGCCGGGCACCTTGATTGATGCCAATGGCAGCATTCCCGTTTCGGTCAATAGCCTTCAACAGCAACAGCAACGAACTGTGGTCCATGGCAGTCAAAATAGTCCAACAACATCCTTGGTAGATACAAGCACAAATGGCTCAACACGCTCAAGGCCTTGGCATGATTTTGGACGACAAAATGATGCCGATAAAATACAAATACCAAAAATCTTCACAAATGTGGGCTTTCGTTATCATTTGGAGAGTCCTATTAGCTCATCGCAGAGGCGAGAGGATGATCGCATTACCTATATAAATAAGGGACAATTTTATGGCATTACATTGGAATATGTTCATGATGTAGATAAGCCCATTAAAAATACAACAGTTAAGAGTGTGATCATGCTAATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCATGGCAATTCTGGCATAGTCGTCAGCATTCGGTGAAGCAAAGAATCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGTTGCAGTTGAAGTTGGGGAATAAGTCGAAGTCCAGCAGTGCCGCCGCCTGGTTAGTTGCTAGTGTTTCTAGCAATACAAAGAACTCAGTTGGCCTCGTTGGTTGCATCGAGGAAGTGTCACACAATGCCATTGCCGTTTATTGGAATCCATTGGAGAGCTCTGCCAAAATCAACATTGCTGTGCAATGTCTCAGTACGGATTTTAGCAGTCAAAAAGGTGTTAAGGGTCTGCCGCTGCACGTACAAATCGATACATTCGAGGACCCCAGAGATGCCACAGTCTTTCATCGTGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAGACACGCGATGAGGAGAGACGTGCGGCCAAACGGAAGATGACAGCAACCGGGCGTAAGAAACTGGACGAGCTATATCATCCGGTTACAGATCGATCCGAGTTCTATGGCATGCAGGATCTTGCCAAGCCGCCGGTACTCTTCTCACCCGCCGAGGATATGGAGAAGGTAGGTGTAGGTGGTCAACGCCAGCCCCCACTACCCATGGGCGGCTACAATTCGAATTCGAACTGCAACTCGAACTCGCATTCGCCCTTGCAGAGCTTCTATGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCATCACCATTCCTGCTGCACGGCCAGAAGGTTGCCACACCAACGCTCAAATTCCATAACCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCACATATTGGATCAGACGATGTTGACCAGCGCACCACCGATGAGTGATTTTGGTCCGCCCATGAAACGGGGACGTATGACACCACCAACATCCGAAAGGGTCATGTTATATGTGAGGCAGGAGAATGAGGAAGTCTATACACCGCTCCATGTGGTCCCACCAACGACCATTGGCCTGCTCAATGCGATTGAAAACAAATACAAAATCTCAACAACGAGCATAAATAACATTTATCGCACAAATAAAAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTTTATTGCAATGAGGATATCTTTTTGCTAGAAGTGCAACAGATTGAGGATGATCTGTATGATGTAACGCTGACGGAGTTGCCCAATCAATAG
- Protein Sequence
- MQDATSHFAISYTDWMSETRRPDTNGYELEPQQQTHPLALPTTHQSHNHHNHHSEHISHYGHHSSSSPPRYYEPEHLSTKQQDNAHLPLTAAGLMQAVAAEIQLSEQSSTNASSYPVYTTYFRDDHDHEKENNNNADEDHLVWSNTNSSGKLNGQTTPIDVSGLSQNEIQGFLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPEDLRKDPKNAANGGAGGAGQAGSVITQKILQVEVDDTTEAESRPSSLDIPHTTPASPDTDPATTDLELEMYATTGGTQIYLQVTDNYGMYTATRLPPGPPPTTSTTFIAAEPYYREYFAPDGQGGYTRSLYGEDVSSFDYTELCQPGTLIDANGSIPVSVNSLQQQQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDVDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLQLKLGNKSKSSSAAAWLVASVSSNTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKVGVGGQRQPPLPMGGYNSNSNCNSNSHSPLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQTMLTSAPPMSDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611824;
- 90% Identity
- -
- 80% Identity
- -