Dneb015452.1
Basic Information
- Insect
- Drosophila nebulosa
- Gene Symbol
- Hivep1
- Assembly
- GCA_018150735.1
- Location
- JAECWO010000031.1:12886163-12903396[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00028 0.021 15.3 0.3 1 23 225 247 225 247 0.98 2 8 0.00021 0.015 15.7 3.3 1 21 253 273 253 277 0.90 3 8 0.0014 0.1 13.1 1.6 1 22 540 561 540 564 0.89 4 8 2.1e-06 0.00015 22.0 2.0 1 23 1290 1312 1290 1312 0.99 5 8 8.2e-06 0.0006 20.1 3.2 1 23 1318 1342 1318 1342 0.92 6 8 2.1e-05 0.0015 18.9 3.6 2 23 1780 1801 1780 1801 0.98 7 8 0.00061 0.045 14.2 1.2 1 23 1807 1831 1807 1831 0.91 8 8 0.002 0.14 12.7 2.7 1 23 1852 1876 1852 1876 0.92
Sequence Information
- Coding Sequence
- ATGACGCCATATCCCTGCAAAGTATCGCACTGCCGCACGTACCTTAGAACGTTTGGGGAACTATTGGGTCTTCTAGAGTCGGCCGATGCTGCTGCTGCTGCCGTTGCCGCCGATTGGACACAAAATTCAAGATATTTGCATAAGAAATTTAAACGTTTGGCCAGTTCAACTGAGGCAGAAAGTGGTGGCAGCACCACCAGCAATAGCAGCAATATAAGTGGCGGCGGTGTCGGTGGCCACAATGATGTGGGCATGCGTACCACTTCCCTGTCCTCAAATAGTTCACTCTCACCGCAGCCAATTACAGTGAATGGTCAAGGAGGACCAACAGCAACAGCAGTAGCAGCTGCCGCTGCCGCTGCAACATTGAGTGAATTCAGTGCCAATCAACATCATGAGGATATCCAAATGATGATCCAAATGACAACAGTAAATCACAGTAATAATATAAGCGGAAAAAGTGCTGGCATTTTAAGTGCGACTCCACCAAGGACACGTACACCGCTTAGCCAAAGTAATGGCACCACTGGCTTGGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCGTTACATTTGTCCATATTGCAATTTGATTTGTGCCAAACCTTCAGTACTGCAAAAGCATATACGTGCCCATACCAATGAGCGACCATATCCATGCAATACCTGCGGCATTGCCTTCAAGACCAAAAGCAATCTCTATAAGCATTGCCGATCGCGGTCGCATGCGGCTCGTGCCAGAGGTATAGAGGTTCCAGCTGATGCTGATGATGGTCTATCCGATCAGGATGTGGACAATGAGCTAAGCAACAGTAGCTCGGAATTGCCTAGTCGCTCTGGTTCGCCCTATGATGAGCTGAATATCACTTCATCACCATCGCCCTCACCATCTACTTTATCTGCGGCGAAAAGTGCATATTTGCAACAGCAACAGCATATGCAACAATTGCCATTGGGTTCACCAGCTGCGGGTACATTGCCACCATTACAGGATAATCAATTGCATTCATTATCGGCCACCACTGCCCAGCAACCAACAGTTCCGCTGGCAACACCCGTCAACTCCTTGCCAACGGCTAATCTAAGTACTTTTGCCAGCGCCAGCGGTGGCATGCAAGTGAATGTGGAAAAGGTTCAGGAGCATATATCCAAGTTGATATCACAAAATGAGGCCATAGTGGAGAATAAGGAGATTTTATTGCAAAAGAAATATCCCAAACAATTGAATCGTTCGCCCACGCCTATTAATAAGCTGGAATTACCAAATGCCGGAGTGTCCAACAATCATGTGATGCCCCTGAATTTGTCCAGCAAAGCCAAGCCAAATACACCAGCAGCAGCAGCAGCAGCAACTGTTGCGACACCAGCAAACGCAGCGGCTCCCGTGTCGGGGCCTGTGCCTAGCACATCCAAATCGGCTTCAACGGCTAATGTGAATAATTCCATTATTAAGAATCTGCTGCTTAATGCCCGCGGTCTGGCCGTGCCCATTGGTGAGGGCGATGATGCTGTCTATTCGTGTCCCATTTGCACTACTGAATTCCGCAGTGCGGATGAATTGAAATTGCATAATAGCACCTATTGCCATGATGCCACATCGAGTGCCTCCATAAGTCCGGCCTCATCGCCGAGTACGAAATATTTTCGTTCCAATTCGATTTCGATGAGTTTGCCAGAGCTCAAGTCACATATGGCCAATTCGAAGAATCCTTTATCGTTGGCCAAATTGGCATGGTCACAGCTAAAGACAAAGCCAAGTAGTTTGGTATTGAGTCGTCTGAGTGCAGCACAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTCCCATGGATTCTTTGCGCTTTGTCGATACTCCTCTGCCCTCGCCAGGACCTTTGCTAGGCAAGACGCCTCTGGTGGATTATAATCAACAAAGTGCCTCCAGACAGGGATCACAGGATGCTCAAGTGGTTATAACCAAAATGCATGAGGATCGTCAATTTGAAAATGATGCCAAAAGACCGAAGATGAGCAATGATACCTTCAATTTTCCCACCTTAATGTTTGGCGCCAACAGCAGCGGCACCCACAACCACAACAACAATAACATTTTGGAGCCACAATCGAGTAAAGAGGAACGCCTAAGACGTTTCACCTCATCGGGTGGCTCAATGATTCCCCTCTCCGAGTGCCCTGAATTGGATAAGAGTCCCAAAATTATACGCACACCCCTGCTATCCGGTGGCAGTTTTCAGGAAATGTCACCCAGCAAGGAACGCAAATTGTTATTGACATCATCGGCGTCATCGAGTGCACAACACTTTCAATTTCCACCCATCAATTCGATAACCGCCTTCAATCCATTGACTCTGCCTCCCATGAGTGGTGGTGGTGGTGGCAGCGGTGAGAAGCCCGCATCTATACCCTATGTGCCAGGAATACCTGGACCAAGTAGCCTAACGCCTCAAATACCATTGTTGCCGCCGCCACCGCAGCAATTGCATCTGCCGCTGCCAGCGCCGGGACGTCAACGTAGTCCGAATCGCAAGCAACCGAGTCCTCTGTTAAGTGGTGCTCTTTCACCCTTCGGTGGAGTGCAAAATGTGCCCAGTGAGTTTAGTCGTCAGCCGCCAACACCAGCTCAAAGGAATGCATTGCAATGGAATAAGGATGTGGCAGCAAAAAAGGCGCCATTCAATTTTTTAAGAATGGCCGATAATGTGAAGGCAACAGCAACAACGCCAACGCCAACACCAATCCCAGCAGCTAGTGAACAGCAGCAGCAACAACCTCTCCAAGAAGTGCGTCATTTTAATTTTGATAATCTGCAGCAACAGACAACAAGCAACATCAACAACAACAACAACAACAACAAGGAACCTCTAACGCCTCTTCATATCGAAACGCCCAATGGCAATGCAGAGGAACAGAGCGGCGCCACCCAATCCCAATCCTTGCCAGCAAAAACGAAATTCTTACGTCCCACCAGTCTGCCCTTGAAACCGGGAACATTTACACCAAAGCGTCATCATGGCATCACACCCACCGCCAATACATTGCCCTTGATATCCCCGGAGACACCAAGACCCTCGAAATCATGTGTCCAACTCTATTTGAATGGTCATGCCTATACCTATTTGGGTCTAAAGTCCAGTACGAAAATGTTTTACTGTACAGTGAACTGTCCGCAACCGTCATATGTGGCTGGCATGCATAAGTTGTCCATGTACAGTGTTTGGCAAGTCTGCGAGGAGAATCAACCGCATCCATTGGGCTTTAAGCTGAAGCAAGTGATGGCTCTCTATGATTCGAGACAAAAGATGTTGGGCAACGGTTCGTCCACCTCGATGGCCGGCAAATTAACCTATACCCAAGTGTATTCACAGCAAACTGTTAGCTCATCGTCATCAACAGTGCCCAGTAGTTCATTCTATCAGCATCCATTGAAACAATTGCCACAACAACCAGCGATAACGGCAGCAATCCAAGCCACCACAACAACAGTGGCCACACTCAGTGAGGCGAATGTGGCGGCCAAGGCGAGTGAAGATGCGGCCACGGCCAAGAAATTGCAAGAGGGTCAACAGCAGCAGCAACTTGTTGGTGGCTATGAATCGCATGAGGATTACACTTACATACGCGGACGTGGACGCGGTCGTTATGTGTGCTCCGAATGTGGAATACGTTGCAAGAAGCCATCGATGCTTAAAAAGCATATACGAACGCATACAGATGTTCGTCCATTTACATGCAGTTTATGCAATTTTAGCTTCAAGACCAAGGGAAATCTCACCAAGCATATGCAATCGAAAACCCATTTCAAGAAATGCAGCGGCGGTGAATTCCTCGATGCCGATGTGGACTTTGATCAGCAATCATCGACTTCGGCTGGCGGACGGACTTCATCAATGGCTGGTGAATCGGATTCCGATGATTACAGTGACAATGAATCCGAGAGTAGTGATACTGATGAGTCCAAGTCACGTTTGAAAGAGCATGAGGCTGCACGTGGTTTGCTTTCGCTATCGATGACTCCACCCATACCACAAAGTGTCTCACCGTATTCCCAGACACAAGATGCTTCACAGCCAGCACCGGCAGCGAGTCCAGCGAATAGTATTGGATCGACTGGATCGCAACCGAAGCGTTTAGTTTGCTCATTTACCTCACCGAAACCGCCATTCGATTATCAGAAGCAGGAACAGTATTATTCCAATCCCGAGGAATCCAAACCGAAGGGAAGTTTGGCCAGCGATGAGAGTGCTCCCATGGATTTGACCAAACCACGTAGCTCCAGCAGCGCTTCCACTGTCATCAGCAGCAGCAATCATCAGGCATTGGATTTGCCTAAATCTCAGGCTCAACAGATGAGAGAAGTGATTTTTGGGACATCCGGCAATGAGAGTGGTTTCATGAAGACTTTGATATCAGTCTCCGATAAAGTGCGCATCTCGGCTGAAATGGAAGAGCAGGCCAAATTGAAGGCAGCCGAAAATGATGGTGATGATCTGCTCCTGCAGACCTATATCAAGGAGCAGGCTCTGCAACATGCCAAGATGAAGCAGAGTCAATTTAGTCGCAGTTATCAAATAAATGTGACCACATGTACGACCAGTAACAGTCGTCCTGTGATGAGTATCAAAGAATTGCCCACCATAGAGGTGAATGAGGTGAAGACACCAGATGAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCACAACTCTACCGCCCATCGAAGCCATTGAAAGTGAGGAGATGGAGTTGCCTCTGCCCACTGAGGAGAAGAAAAAAGATGAAATTAATGTCTCATCGGATGCGCCACATAATGCCAATTTGCCAGCAGCTATCCAGCAGCCAGATGCCACAGATTTCAAAGGTGTTCTAACTACTACGGTCTCCTCCTCCGCCTCCTCCTCGACTTCCAGCAGTGGGGCAGCAGCTCCATTGACCCGACCTGTGATTAGGACAGAGGATAAATTCAAGCCAGCTGATTTACCTGTTAGTGTGGTGGCTCCGCCACCGCCTCAGCGTGTTGTGGTCGCTCCACCACCGCCACCCATTGCCAGCGATGCACGTCCCACCTGCAACATTTGCCAGAAAACCTTTCAACGCCAACATCAACTCACGCTGCACATGAATATCCATTATATGGAACGTAAATTTAAATGTGAACCCTGCAGCATTTCATTTCGCACTCAGGGTCATCTGCAGAAACACGAACGTTCCGAGGCCCACAAGAACAAGGTGATGATGACATCGACTTTTGGTGTGCCCACCACCTCGAATCCGCGTCCCTTTGAGTGTACCGACTGCAAGATAGCCTTTCGCATTCATGGCCATTTGGCCAAGCACTTGAGATCGAAGACTCATGTCCAGAAATTGGAATGTCTACAGAAATTGCCATTCGGCACATATGCAGAGATCGAAAGAGCTGGCATCAGTCTAACCGAAATCGATACGAGCGATTGCGAGAATTCTCTAATCTCATTGAAATCGCTGGCACAGAAGCTACTCGAAAAAGATCCCAATAAGCTAAGTGGTTACACATCGCCATCGGGTATGCCGCACCTGCAGGAGACGGCACGTCCCACGGATGCTCAGGATAGTGCCTCCGAGGATGGTTTCAGTGCCGCAAATAGTGCTGCTGCCTCGGCCATTGCCTCATTGGACAACGATAGTGCTGGCAATACACCACAGCGAGCAAGTTCCATGTCAGAGGATGAGACGGTGACCACACAGAGCTTGAAGCGTCGTCTGCCCGCCACCAGTTTCAGCAGCAATGGCGAGGAGAGCGATAATCCTCAGGAGAATGGTGGAAATGAGAAGCGGGCTAGATCGCAGGATTTAACTACAGCCACTGTAGCGGCCAGCAACTGA
- Protein Sequence
- MTPYPCKVSHCRTYLRTFGELLGLLESADAAAAAVAADWTQNSRYLHKKFKRLASSTEAESGGSTTSNSSNISGGGVGGHNDVGMRTTSLSSNSSLSPQPITVNGQGGPTATAVAAAAAAATLSEFSANQHHEDIQMMIQMTTVNHSNNISGKSAGILSATPPRTRTPLSQSNGTTGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRYICPYCNLICAKPSVLQKHIRAHTNERPYPCNTCGIAFKTKSNLYKHCRSRSHAARARGIEVPADADDGLSDQDVDNELSNSSSELPSRSGSPYDELNITSSPSPSPSTLSAAKSAYLQQQQHMQQLPLGSPAAGTLPPLQDNQLHSLSATTAQQPTVPLATPVNSLPTANLSTFASASGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSPTPINKLELPNAGVSNNHVMPLNLSSKAKPNTPAAAAAATVATPANAAAPVSGPVPSTSKSASTANVNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICTTEFRSADELKLHNSTYCHDATSSASISPASSPSTKYFRSNSISMSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSAAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPMDSLRFVDTPLPSPGPLLGKTPLVDYNQQSASRQGSQDAQVVITKMHEDRQFENDAKRPKMSNDTFNFPTLMFGANSSGTHNHNNNNILEPQSSKEERLRRFTSSGGSMIPLSECPELDKSPKIIRTPLLSGGSFQEMSPSKERKLLLTSSASSSAQHFQFPPINSITAFNPLTLPPMSGGGGGSGEKPASIPYVPGIPGPSSLTPQIPLLPPPPQQLHLPLPAPGRQRSPNRKQPSPLLSGALSPFGGVQNVPSEFSRQPPTPAQRNALQWNKDVAAKKAPFNFLRMADNVKATATTPTPTPIPAASEQQQQQPLQEVRHFNFDNLQQQTTSNINNNNNNNKEPLTPLHIETPNGNAEEQSGATQSQSLPAKTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKSSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQKMLGNGSSTSMAGKLTYTQVYSQQTVSSSSSTVPSSSFYQHPLKQLPQQPAITAAIQATTTTVATLSEANVAAKASEDAATAKKLQEGQQQQQLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSLCNFSFKTKGNLTKHMQSKTHFKKCSGGEFLDADVDFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPYSQTQDASQPAPAASPANSIGSTGSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKGSLASDESAPMDLTKPRSSSSASTVISSSNHQALDLPKSQAQQMREVIFGTSGNESGFMKTLISVSDKVRISAEMEEQAKLKAAENDGDDLLLQTYIKEQALQHAKMKQSQFSRSYQINVTTCTTSNSRPVMSIKELPTIEVNEVKTPDENXXXXXXXXXXXXXXXXXXXXXXXXPTTLPPIEAIESEEMELPLPTEEKKKDEINVSSDAPHNANLPAAIQQPDATDFKGVLTTTVSSSASSSTSSSGAAAPLTRPVIRTEDKFKPADLPVSVVAPPPPQRVVVAPPPPPIASDARPTCNICQKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKSLAQKLLEKDPNKLSGYTSPSGMPHLQETARPTDAQDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETVTTQSLKRRLPATSFSSNGEESDNPQENGGNEKRARSQDLTTATVAASN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00604338;
- 90% Identity
- -
- 80% Identity
- -