Basic Information

Insect: Drosophila navojoa
Gene Symbol: -
Assembly: GCA_001654015.2
Location: NW:32681-34407[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.039 48 3.6 0.3 6 23 22 37 21 40 0.87

2 8 7.5e-07 0.00093 18.7 1.8 14 44 165 192 157 192 0.87

3 8 9e-06 0.011 15.2 1.1 12 43 219 247 215 248 0.89

4 8 0.1 1.3e+02 2.2 0.9 16 37 280 298 272 304 0.77

5 8 6.6 8.1e+03 -3.6 4.4 12 41 334 360 324 361 0.69

6 8 0.052 63 3.2 0.1 19 39 369 386 367 396 0.82

7 8 0.0048 5.9 6.5 0.5 18 38 396 413 390 413 0.84

8 8 0.0043 5.3 6.6 0.9 14 40 420 443 410 446 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.039	48	3.6	0.3	6	23	22	37	21	40	0.87
2	8	7.5e-07	0.00093	18.7	1.8	14	44	165	192	157	192	0.87
3	8	9e-06	0.011	15.2	1.1	12	43	219	247	215	248	0.89
4	8	0.1	1.3e+02	2.2	0.9	16	37	280	298	272	304	0.77
5	8	6.6	8.1e+03	-3.6	4.4	12	41	334	360	324	361	0.69
6	8	0.052	63	3.2	0.1	19	39	369	386	367	396	0.82
7	8	0.0048	5.9	6.5	0.5	18	38	396	413	390	413	0.84
8	8	0.0043	5.3	6.6	0.9	14	40	420	443	410	446	0.70

Sequence Information

Coding Sequence: ATGCTGAAGGCTCTCAAGCCGGACACATTTGCCGGCATTGCCAATGCCAAGTGTGGGGAGGTGTATTTCCAAAGTCTAAATAGCTATCGCATTGACTGCGCCTTCTGCCACATGAAGAGCTTTGTGTTCGCTGACTTTCTGCTGCACATTCAGAACGAACACTTTAAGGATGGGCTGCTCAAGGCGGAGGTGATGCTGCCGAAACAGGAGGACATGGACAGCAGCACCTCGGCAACCCAAACGAATTTGTTTTCCTGGTATGAAGTGACGACCAACGAATACGACTTGGCCAACAGCGGGACTGAGTTTCTGGGCGAGACTAAGCAGCTGgtggacgacgacgatgatgatgaggaggaTGAACTGGAGGATCCTGTTGGCATCATGAAATGGGATGTGTCGACGGAGTGCCTTTACAATGATCGCATAATATCAGATGCTGACAATTCAGATGCCATAAGCCAGGAGCTAGAGGCGCCCCTCAGGGCCACAAAGGAGCAGCTGACCTGCATACACTGCAATAAAACGTATCAAAGCAATAAGTCGCTGCAGCGCCACATGGAGCGGCAGCACAAGTATGCCGATGCCGTCTCAGAGGATGACGTGGACGTGGACATCGACGCAGACTACGAGCCGCCCAAGGTGCACGCACCCAAGCCATCCACCAAATACAAGTGCGACCACTGTGACAAGGTCTATCACGGCAAGTACACGCTGCGGCAGCATGTGAAGCGGGACCATGACATCAGCCTGAGCGACGCCTTTGTTTGTCTGGAGTGCAATGTGCAGTTGCCACGGCTGCGTCTGCTGGACGAGCATGTGGTGAAGGTGCACGGCGGTGCGCCTTGTGTGATATGCAATCGGCGGTATAAGACGCGTCACGAGTTGAAGCGGCACCAGCTGAAGCATACGAATGAGCGCGATGTGCCATGCAGCCATCCGGGCTGCGAAAAGCGCTTCTTTACCACGCGCCATATGCGGAACCACAGTAAGGTGCATTCAGAACAGAAGAACTTCGTGTGTGAGAGCTGCGGCTACAGCTGCCGCAATAAGGAGACGCTGCGGGTCCATTTGCGCAGCCACACGGGCGAGCGTCCTTTCGGCTGCAAGGTGTGCGACAAGCGCTTCCCCTCCCACTCGGGTCTGCGCGAGCACATGGCCATGCACTCGACGGAGCGACCGCACGTGTGCAAGGTATGTGGCGCCACTTTCTCTCGCCAGAAGGGACTTTACCACCACAAGTTCCTGCACGCAGCTACGAAGCAGTTCGTGTGTAAGCTCTGTGGCAATGAATATGCTCAGGCAGCGGGTCTGGCGGGGCACATGCGAAAGCACCGCAATGACGAGCTGAATGGCTGA
Protein Sequence: MLKALKPDTFAGIANAKCGEVYFQSLNSYRIDCAFCHMKSFVFADFLLHIQNEHFKDGLLKAEVMLPKQEDMDSSTSATQTNLFSWYEVTTNEYDLANSGTEFLGETKQLVDDDDDDEEDELEDPVGIMKWDVSTECLYNDRIISDADNSDAISQELEAPLRATKEQLTCIHCNKTYQSNKSLQRHMERQHKYADAVSEDDVDVDIDADYEPPKVHAPKPSTKYKCDHCDKVYHGKYTLRQHVKRDHDISLSDAFVCLECNVQLPRLRLLDEHVVKVHGGAPCVICNRRYKTRHELKRHQLKHTNERDVPCSHPGCEKRFFTTRHMRNHSKVHSEQKNFVCESCGYSCRNKETLRVHLRSHTGERPFGCKVCDKRFPSHSGLREHMAMHSTERPHVCKVCGATFSRQKGLYHHKFLHAATKQFVCKLCGNEYAQAAGLAGHMRKHRNDELNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00520112;
90% Identity: iTF_00479666;
80% Identity: iTF_00554588;