Basic Information

Insect: Drosophila navojoa
Gene Symbol: -
Assembly: GCA_001654015.2
Location: NW:975567-978039[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.5e-11 1.9e-08 33.7 0.1 5 43 37 73 33 74 0.94

2 5 3e-11 3.7e-08 32.7 2.6 3 44 99 139 97 139 0.95

3 5 1.2e-07 0.00015 21.2 2.7 2 43 170 208 169 209 0.95

4 5 1.3e-14 1.6e-11 43.5 1.4 1 44 244 284 244 284 0.97

5 5 0.2 2.4e+02 1.3 0.6 11 41 315 346 307 349 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.5e-11	1.9e-08	33.7	0.1	5	43	37	73	33	74	0.94
2	5	3e-11	3.7e-08	32.7	2.6	3	44	99	139	97	139	0.95
3	5	1.2e-07	0.00015	21.2	2.7	2	43	170	208	169	209	0.95
4	5	1.3e-14	1.6e-11	43.5	1.4	1	44	244	284	244	284	0.97
5	5	0.2	2.4e+02	1.3	0.6	11	41	315	346	307	349	0.64

Sequence Information

Coding Sequence: ATGTCAGAGGACAGTGATTCAATAGCCGAGCATGAAATCGATGAAACAATGGCAAACCAAAACACGATACCCCTGCAACCAACGCAAAAACGCCAGAGCTTCGTTTCGAAGTTCTTCAGTCCAGTGCCCGACCACTCGAATGTGTTTAGATGTAACGTATGCAATGAAACCTTTGCCAACAAAACAACCAATCTAAGTAGGCATTTGCAATCAGTGCATGGCCTCGCAGAGTATCACATCCCAAAGCATCATCAGCAGGATTCAGTAAAGAAAGGTCGGCCGAATCGCAGTTTCGTGTGGAACTTTTGCACCAAACTGGATGAGAAGCGTGCTCTGTgccatatttgtaaaaaagtGTTGTATTTTGGCGGCGGAAATACGTCCAACATAACAAAACATTTGAGACGCATGCACTCTGAAAAGTTAGAGGAAGTTGCTAAGCAAATGCCACTCAACATGCGCTGGTCCATGGAGCAGTCAACGAGGAAAGAGCGTAGAAGCTCCAGCTATGTGTGGAATCACTGCGAGAAACTGACGGCCGATACAGTCTTATGCAGAATATGCGATCGTCGCATGCGATTCCATGGCACGGCCAACGTCATAACGCATCTGCAACGCCGTCACGGCATTATGGATGAAACGTCGCAGGTGAAAACCGAGGCGCCTGATAAGGtgcaggcagcagccacatcCAGCACAAACGAGAATCCGCGCAGAAGCATCAGCGGCAGCCAGGTCTGGCGATACATCACACGGATTTCAGAAGATGCAGTACGCTGTCGCGTTTGCCTTAAGAATCTATCGTATCAGGGCACAAGCAACCTGCAAAGGCATTTGCATCGCATGCACAATATTGCTTGGAACTCACAACAGCCGAGTGGACCGGTCAAAGCTGAAAGCCTTGACTTCGATGATAACTCGTTCTTCGCCTTCTGCGAATCCACCAGCGATCCCACTGTCTCGAAGTGCCAAATGTGCGACGAACATTTTGTGCACACCGAAAATCTAGAAGAGGTCATAAGCAAGCATATGATTAAGATTCATAGTGCAGCAATGCGCGGGGAACCGGTTGAAagtTTCGCTCCCACTGAAGAGGAGGATGAAGATTTTTCCACTCTCTATACGgaagttgttgctgatgatcACAATACTACTCCGTCGGGAGAAGTCAGCGAGCAAGCGAAGCTATCAAATGTCGTTGCTGAGGATGCACTTTATGATGATCTCATCGAGATTGACGAAGATCTGCAGAATGCTGAAGAGATTGGTGAGCACTTTGCGGTTGAAAGTGTTCGCTATGGGAATGCATTGTCCGTGCAGTCGGGCGAAAATGTTGCATCCGATTACAGCAACGATAGCACCGATGCCCAGCTGGTGACGACTACTATTCAAGCAGACGACACGCCAGTTATGCGTGAACTAAAAGAGGATCTATTGCGCCAACAAGCGATGTATTTCAGTGAGAAGGCTGGCTTCTATCGCATGCAAAAATTTCTAGTGGCGCAACAGGTGCTCAAGGAGCGgctagaaattgaaaaactcaaatctggacaacaacagcaccaagTCAGCTAG
Protein Sequence: MSEDSDSIAEHEIDETMANQNTIPLQPTQKRQSFVSKFFSPVPDHSNVFRCNVCNETFANKTTNLSRHLQSVHGLAEYHIPKHHQQDSVKKGRPNRSFVWNFCTKLDEKRALCHICKKVLYFGGGNTSNITKHLRRMHSEKLEEVAKQMPLNMRWSMEQSTRKERRSSSYVWNHCEKLTADTVLCRICDRRMRFHGTANVITHLQRRHGIMDETSQVKTEAPDKVQAAATSSTNENPRRSISGSQVWRYITRISEDAVRCRVCLKNLSYQGTSNLQRHLHRMHNIAWNSQQPSGPVKAESLDFDDNSFFAFCESTSDPTVSKCQMCDEHFVHTENLEEVISKHMIKIHSAAMRGEPVESFAPTEEEDEDFSTLYTEVVADDHNTTPSGEVSEQAKLSNVVAEDALYDDLIEIDEDLQNAEEIGEHFAVESVRYGNALSVQSGENVASDYSNDSTDAQLVTTTIQADDTPVMRELKEDLLRQQAMYFSEKAGFYRMQKFLVAQQVLKERLEIEKLKSGQQQHQVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00540491;
90% Identity: iTF_00540491;
80% Identity: -