Basic Information

Insect: Drosophila nasuta
Gene Symbol: -
Assembly: GCA_017165715.1
Location: Scf:51654-56251[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.01 0.66 10.2 0.4 1 23 226 249 226 249 0.98

2 7 0.0015 0.094 12.8 5.4 1 23 257 279 257 279 0.98

3 7 0.025 1.5 9.0 0.6 1 23 347 370 347 370 0.96

4 7 0.002 0.13 12.4 2.2 1 23 378 401 378 401 0.98

5 7 0.0015 0.097 12.8 1.6 2 23 700 722 699 722 0.96

6 7 0.033 2.1 8.6 0.4 2 19 727 744 726 746 0.90

7 7 0.029 1.8 8.8 0.1 3 23 756 779 754 779 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.01	0.66	10.2	0.4	1	23	226	249	226	249	0.98
2	7	0.0015	0.094	12.8	5.4	1	23	257	279	257	279	0.98
3	7	0.025	1.5	9.0	0.6	1	23	347	370	347	370	0.96
4	7	0.002	0.13	12.4	2.2	1	23	378	401	378	401	0.98
5	7	0.0015	0.097	12.8	1.6	2	23	700	722	699	722	0.96
6	7	0.033	2.1	8.6	0.4	2	19	727	744	726	746	0.90
7	7	0.029	1.8	8.8	0.1	3	23	756	779	754	779	0.90

Sequence Information

Coding Sequence: ATGAGTGGAAATGTAAAGAAAGCGGTGGCAGTTTGCGACTATTGCAAAACTGAGAAGGATACCAGCCAGATCTATTCAGGCCGCAAACATTTCGCGGGGCTTAAGATTGTTGACATACTTAAAATTATCACCAAACTCGAAATACCAACAAATACGCCCATCAAACTGTGCACCATGTGCATTTCAACATTACATGCTACAAGCGGCGTCATCGAGCGTGCCGGTGAAATGATCAACCATTTGGTGCCGCTTCCTAAAAATCAGGCTGGTGTTGCCAATAAGACCAATATTGAAATTAATGATAAACCTATACAGGTGCCAAGTGATTCCGAGCCAGAGGAGCCTGACGAACCGACACGTCAAGAGATATTTAATTCACCATCCAAAAACATGGCGGCCACAAATGGAACTTCAACGGTGTTTAAAAAGCAATTGGACAAATCTCCAAAAAAACAACTTTTCAGCACTGGAGGTCCCTCTAAACTGAACGAAAGTTTGAAGCACGTGATAAAATTAACTCCAGCTACTCCAGCTGATGGTGCTGCTAACAAGAGCACAGCCTTTAGCCAATTGTTTGGCAACAGTGTAAATCATATTTCTGATAGCGACGGCAGCAGCGATGAAGAGGAAGAGGCTACCAAGGGGCCCGAAGAGAAGAGGAATATTGCCACCAATTTCGAATGTAAATTGTGCGATTTTAAATCCGTATATCCCAATCCCATGAAGATTCACATGAAAACTATACATGACCAGAAGCGCCCTCGCATCTACGATTGCACGAAGTGCCACAAGTGTTTCGGTTTACTTAAAACTTTGAAAGTTCACCTGCTAACACATGGAATGGTCGAGGAGAAGGAGAAAGAGAATAAGGAGAAGGAGAAGGGAGCACCCGATGTGACACTTGCGCGGCTGACCGCTTTGAATCCAAAACCAAAAGGCTTAAAGAATGGAGAGCTTACGTTTGCCGTTCAGGACACCAATTCATCCACTCCAAAACCTGGCGAACCTCTAAAGGTGAAACCGGTGTCAATCAATTCATTTAAATGCGATATTTGCCACGAAGACATCAAAGGCATTAAGGCCTTCCAAAAGCACATGACGATTGTGCATAACATTGAGAAGCCTAAGATCTTTAAATGCCCTGAATGCGAATCTGAGTTTATGCACAAGAGCACCATGGGGAAGCATATAAAAATGAAGCATGGCGAAGGGGCGAAGTTGAATGTTCCGCGCCGTCGCAAGACTATCGACGAGCGTGCACTACTAGGTAACATGGAAGGTGGCGAGAAAATTAAAAAACCAGCAAAAATTGCGGCTCGTCGCAAGACAGTTGATGTCAGCATCGCTTTAGCTGGAATGTCGCAGGCCAAGAACAAAAAACTGCCGCAAGTCCTTGATGAAATGAACAGTGATGATGTGACACCTCAAAAGCCAAAGAAATCAACTCAGCAGCTAATCACCGAGTCGCTCAAGTCATCGCCAAAGATCGCCAAGTTGAGTGACAACAACAACAAAGAGAACGCAGCCAATCTGCAGAATGGCACGGCAATTGAGGAGGCTGCCACAACAAGCAAGAAAAATGTATCCAAGAAAGACATTGATGTAATTGACACCTCACAGATTACACCATTAAATACTGAATCGCCGAAGAAGAAGGCCAAGAAAGACGGCGAGGTGCTAGCCTCTCCGGCACTAAGCGTTGGCACACCAAAGAAGACCAAACCGAAGAAGGACAAAGATGGATTCGCCACTCCACAGAACACACCAATCGCCACTCCAAACAAGGTGAAGCGCAAGAAGGATGCACTCGACACATCACAGTTGTTGATAAACAATGGCAATGAATCTACCTCCGAGACGCCCAAAAAGTCAAACAAACGCAAGCATAAGCTATCGGAATCATCGCCAAAGCTTGTTATCGATGAGGACTACGAAGAGGAGACCACAAAGCAGAGCCCGCTCAAGAAGTCAAAACAAGAAGAGTTTATAGACGATGATATCATACTATTCGAGGAGGTGAATTCGAATCCATTGCCACATCGCCGTGAAATGCTCGAATCCATGTCACAGGACAGCATCGATACCAGCTCCGCATTGTCCTGCAGTCAATGCAACAAAGTGGTGAGCACCCGCAAGCGTTTGGATTCCCACATCCGTAAGAAGCATTCGGGCCATCTCAAGTGCCGCGAATGCTCACAGAGCTTCACACAGAGCAACGACTTTGTTGGCCACTTTGCTAACTGCGTTGCTTTCGAGCGCTTGGCATGTGGTGTGCAAAACTGCGACAAGGTCTTTGCAGCGGCGAATTTCCTTAGCGCACATCTTAAAAAGAAGCACAAGTTTAATTAA
Protein Sequence: MSGNVKKAVAVCDYCKTEKDTSQIYSGRKHFAGLKIVDILKIITKLEIPTNTPIKLCTMCISTLHATSGVIERAGEMINHLVPLPKNQAGVANKTNIEINDKPIQVPSDSEPEEPDEPTRQEIFNSPSKNMAATNGTSTVFKKQLDKSPKKQLFSTGGPSKLNESLKHVIKLTPATPADGAANKSTAFSQLFGNSVNHISDSDGSSDEEEEATKGPEEKRNIATNFECKLCDFKSVYPNPMKIHMKTIHDQKRPRIYDCTKCHKCFGLLKTLKVHLLTHGMVEEKEKENKEKEKGAPDVTLARLTALNPKPKGLKNGELTFAVQDTNSSTPKPGEPLKVKPVSINSFKCDICHEDIKGIKAFQKHMTIVHNIEKPKIFKCPECESEFMHKSTMGKHIKMKHGEGAKLNVPRRRKTIDERALLGNMEGGEKIKKPAKIAARRKTVDVSIALAGMSQAKNKKLPQVLDEMNSDDVTPQKPKKSTQQLITESLKSSPKIAKLSDNNNKENAANLQNGTAIEEAATTSKKNVSKKDIDVIDTSQITPLNTESPKKKAKKDGEVLASPALSVGTPKKTKPKKDKDGFATPQNTPIATPNKVKRKKDALDTSQLLINNGNESTSETPKKSNKRKHKLSESSPKLVIDEDYEEETTKQSPLKKSKQEEFIDDDIILFEEVNSNPLPHRREMLESMSQDSIDTSSALSCSQCNKVVSTRKRLDSHIRKKHSGHLKCRECSQSFTQSNDFVGHFANCVAFERLACGVQNCDKVFAAANFLSAHLKKKHKFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472672;
90% Identity: iTF_00472672;
80% Identity: -