Basic Information

Insect: Drosophila murphyi
Gene Symbol: -
Assembly: GCA_018904325.1
Location: JAEIFX010001243.1:24584686-24590002[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.47 5.9e+02 0.5 0.0 17 26 250 259 243 262 0.81

2 16 6.8 8.6e+03 -3.3 0.0 19 29 280 290 275 296 0.70

3 16 0.044 55 3.8 0.5 16 41 305 327 298 329 0.86

4 16 0.029 36 4.3 3.1 6 38 324 356 321 356 0.73

5 16 0.00025 0.32 10.9 2.8 5 38 351 384 349 385 0.82

6 16 0.018 23 5.0 2.7 5 30 379 404 377 413 0.83

7 16 0.0061 7.7 6.5 3.9 18 38 419 440 404 444 0.86

8 16 0.0016 2 8.4 2.8 6 32 436 462 435 468 0.76

9 16 0.01 13 5.8 2.5 10 33 464 492 458 498 0.66

10 16 0.00087 1.1 9.2 4.8 5 38 492 525 488 526 0.80

11 16 0.0059 7.4 6.5 3.3 6 38 521 553 518 559 0.79

12 16 0.0079 9.9 6.1 6.7 13 38 555 581 548 587 0.81

13 16 0.0099 12 5.8 5.6 16 33 586 604 576 610 0.72

14 16 0.0048 6.1 6.8 4.9 17 38 615 637 604 639 0.76

15 16 0.1 1.3e+02 2.6 10.0 10 43 637 666 630 667 0.81

16 16 2.9 3.7e+03 -2.1 0.1 18 26 673 681 672 686 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.47	5.9e+02	0.5	0.0	17	26	250	259	243	262	0.81
2	16	6.8	8.6e+03	-3.3	0.0	19	29	280	290	275	296	0.70
3	16	0.044	55	3.8	0.5	16	41	305	327	298	329	0.86
4	16	0.029	36	4.3	3.1	6	38	324	356	321	356	0.73
5	16	0.00025	0.32	10.9	2.8	5	38	351	384	349	385	0.82
6	16	0.018	23	5.0	2.7	5	30	379	404	377	413	0.83
7	16	0.0061	7.7	6.5	3.9	18	38	419	440	404	444	0.86
8	16	0.0016	2	8.4	2.8	6	32	436	462	435	468	0.76
9	16	0.01	13	5.8	2.5	10	33	464	492	458	498	0.66
10	16	0.00087	1.1	9.2	4.8	5	38	492	525	488	526	0.80
11	16	0.0059	7.4	6.5	3.3	6	38	521	553	518	559	0.79
12	16	0.0079	9.9	6.1	6.7	13	38	555	581	548	587	0.81
13	16	0.0099	12	5.8	5.6	16	33	586	604	576	610	0.72
14	16	0.0048	6.1	6.8	4.9	17	38	615	637	604	639	0.76
15	16	0.1	1.3e+02	2.6	10.0	10	43	637	666	630	667	0.81
16	16	2.9	3.7e+03	-2.1	0.1	18	26	673	681	672	686	0.84

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGACCGCCGTCATTGCCCGGTGTAAAATCGACGGAATCATCTCATAAAGAGGACGGCGGCAAGCAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAGTTATTCACGTATCACGAGGTCTTTGGCAAAATCCACGGCGATGTGGTTAATCATGTGGCGGCGGTGCATGGCAGCCAGTTGCCACCGCCGCAACTGCCACCGCCGCCCCCCCTACCGCCACAGACGACGCATTCGGCAAGCGCAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCATCGCCACGGTGACAACGACCAGCTCGGGCAGCAACGGGGGTGGGAATGGGGGCAACAACTCAACGACAACGACGGGTGAGTTGCTAATGCCGAAAATGGAGGGAGGCATCCATGGCGTTGATGGTCAGTCGAGCGTTGCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGACATTTGTGGCAAGATGTTCCAGTTTCGCTATCAGCTGATTGTGCACCGCCGCTACCACAGCGAGCGCAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGTTTTACCACATCGCAGGATTTGACCCGTCATGGCAAGATCCACATTGGTGGTCCCATGTTCACGTGCATTGTCTGCTTCAATGTGTTTGCCAATAACACGAGTCTGGAGCGCCATATGAAACGGCATTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGTCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCATTTGTTAAATCATGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATATTGCACCAAGACGTTTACGCGCAAGGAGCACCTCACCAATCATGTGCGACAGCATACGGGCGATTCGCCGCATCGCTGCTCCTACTGTAAGAAGACGTTCACCCGCAAGGAGCACCTGACGAATCATGTGCGTCTGCACACGGGCGACTCGCCGCACAAGTGCGAGTACTGTCAGAAGACGTTTACGCGCAAGGAGCATCTCAATAATCATATGCGCCAGCACTCCAGCGACAATCCCCATTGTTGCAACGTCTGCAACAAGCCCTTCACACGCAAGGAGCATCTGATCAATCATATGTCACGCTGCCACACCGGCGATCGTCCCTTCACCTGCGAGACGTGTGGCAAATCCTTCCCACTCAAGGGCAATCTGCTGTTCCATCAGCGCAGCCACACCAAGGGGCAGGAGTGCGAGCGTCCATTCGCCTGCGAGAAGTGCCCCAAGAATTTCATATGCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAGTGTAGCACGCGAGACGTGGCGTCAGCATAG
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPSLPGVKSTESSHKEDGGKQPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIATVTTTSSGSNGGGNGGNNSTTTTGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKXXXXXXXXXXXXXXXXECSTRDVASA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00478871;
90% Identity: iTF_00553170;
80% Identity: iTF_00553170;