Dmur008284.1
Basic Information
- Insect
- Drosophila murphyi
- Gene Symbol
- -
- Assembly
- GCA_018904325.1
- Location
- JAEIFX010000266.1:6079701-6080480[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-20 1.9e-16 59.3 0.0 2 45 66 110 65 110 0.97
Sequence Information
- Coding Sequence
- ATGGTGCAGTCCGTCTACAGTCAGGGTCCGACACCCACACAGTCGCCTGTCCACTCCGGCGTGGGCGGCGGCGGCGGCAGCAGTGCGGGTGGAAGTGCGGGCAGTGCTGGCGGCGGTGGTGGCAATAGCAGCAGTGGCGGTGGTGGCAGCGGCAGTCAAGTGACCAAACGCAAGCGATCCGTAAATCCCCAGGGCGATGAGAATTTCATCAGGGCATTGGAAGCGGTGCGCACCGGCGGCATCGGATTCTGCAAGGCTGCTCGCCTCTACGGCGTGAACAATCGCACGCTTTGGCTGGAGTACAAGAAACGCGGCTATCCGGTGTCGAGACCGAGCATAAAGGCGCGCGTCGTCAAACAGGAGCCGAATCTATCGCCATCGCCCACACCATCCACAAATCCCGGCGACGATACGACCAACGAAACATATGATCATCTAACCGCTGCAGCTGTTGCCGCAGCACAAACGGCTGCGCTCAATATGCAGATACCGCCGCAGACGGAGACGCCGACGCCATCGCTGATGTGCGCGCCGCATCATGCGAGCGCAGGAGCGGCCACCTCAGCCGGTGGGGCCAACACGCATCCGACCATCGGCGTGATGAGCCTCTTCGATGCCCGCTACATGGACTCACCGGCCAGTGTGCACACCATGTCCCGGCAGAGGTATATCGATGCGACGGGCGCCGGTGCAGCTGCTGCAGCGTCGGGAGCGGGCACAATCAATGTTAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSAGSAGGGGGNSSSGGGGSGSQVTKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVAAAQTAALNMQIPPQTETPTPSLMCAPHHASAGAATSAGGANTHPTIGVMSLFDARYMDSPASVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00573239;
- 90% Identity
- iTF_00544413;
- 80% Identity
- -