Basic Information

Gene Symbol
ct
Assembly
GCA_018904325.1
Location
JAEIFX010001255.1:3637441-3654314[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.2e-27 5.8e-23 80.6 0.0 3 71 458 527 456 533 0.94
2 3 4.8e-32 3.9e-28 97.1 0.0 3 77 921 996 919 998 0.96
3 3 2.9e-31 2.4e-27 94.6 0.0 3 76 1211 1285 1209 1288 0.96

Sequence Information

Coding Sequence
ATGACAAAGTCTCTGTCTGCCAACCACAATGAAAGTATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGCCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAACAACAGATAAATGAGGCACTTGCCGAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATCAACAGATCTAACATCTACCCATCAGCACAATGACGATGAAGACGATGATGATGATAATGATAACGATAATGATAATGATAACCATGCTGAGCTGCGCGATGATGGCGATGATGATGAGGAGGACACGGATATGGCCAACGAGCAGCAGCATGCTGCCATTGGCAACAATCGGCACAACGATGATAACGAAAAGGATGAGGACGAGGAGCAGGATGCCGATCTATCCAATGCCACAGCCACAGCGGACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATTTGAATGTGCTTAGCCCACATTCGGCGATTGCCACAGCTGCCGCGGCCGCAGCAGCCGCTGCCTGCGCCAACGATCCGAACAAATTCCAAGCTTTGCTCCTGGAACGCACCAAAGCGCTGGCCGCCGAGGCTCTGAAGAATGGCGCCAGCGAGACAGCGAATGCAAGCAGTGATGGTGAGTATATTGGCAGCGGCTATCCGCGCCCCCCTCCAACTCTAGCGAAATGCCGCAACAACAAGCAGCAGACGCAGCAACAGCCGCTAATCAACGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCAGCGGCCGCTGCCAATGTGGCAGCTGTTGCTGCCGTTGCCGAGGATAACAACAACAGCCTGACGCCAAATGCGAATGCGGCTGTCGCCGCTGCAGCAATGGCTGCCCATGCACAGCACGCGGCCGCATTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCAGCGTTTCAATTTGCGGCCGCCGCTGCCGCTGGCCAGGATCCTCGAGCACAGCATTTTCGCTTCGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAGGCGCTCGACACACTTCACATCTCGCGACGCGTACGCGAGCTGCTCTCCGTGCATAATATCGGGCAGCGGCTGTTTGCCAAATATATATTGGGACTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTCAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCTGTCGCCGCACAGCAGCAGGAGCATCAGCGTCGCCATGTCGTCGACGATACGCACAGCAACGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCATCTGCAGCCGCAGCAGCAGCAACAGCTGCAGCATGCCACCGAGCATGCACAGCGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCCCGTGAGCAGCAGCAGCGCCTTCGTCACGACGAACTGGGACCGGACAAGATGGCGCGTCTCTACCAGGAGCTAATGACGCGCACGCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCAACCGCCAATCCATTCCCCACAGCAATGGCCGCCGACGAGAATATGCGTCATGTGCTCGAACGTGAGATAGCCAAGCTGCAACAGCAGCAGGCACAGCAGGTGCAGCAGGCTGCCAGTTTTCCCAACTTTTCCAGTTTGATGGCACTGCAGCAGCAGGTGCTGAACGGTGCGCAGGATCTATCGCTGGCCAACAAGGATATCAAGTTAAATGGACAGCGCTCATCGCTCGACCAGCACAGTGGCGGCAGCAGCAGCTGCTCCAAGGATGGCGAACGTGGCGACGATAACGACAGAAGCTATCCATCGCTGTCCCATGCTGCACGCAAATCGGAGGGCGGCAACACACCAGCACCGCCCGCACCATCACTAACACAGACATCGGCGGGCAGCGGCAGCAATTCAAATGCAGCCAACTCAACGGTTGCCAGCGGTCATGGCAGCAACTCAGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCAGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTCCAGCGAATGGCATCGATTACCAATTCACTGATTACACAGCCGCCTGTGACGCCGCATCATTCGCAGCCGCAGCGGCCAACGAAGGCGGTGCTGCCACCGATCACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGACATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTATTCGGTGAGTCTGTGTTGGGATTGTCGCAGGGTTCCGTTTCGGATTTGCTGGCACGGCCCAAGCCTTGGCATATGCTGACACAAAAGGGTCGGGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCATAAGCTGGTCGCCAGCCAGTATAAGATTGCGCCTGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATGCCCCAAGGATTGGCCAACAAAATGCAGGCGACGCTGCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCAATGTCGGCAGCAATGCAACAGCAACAGCAGGCAGCTGCCGCTCAAGCTGCCGCCGTACAACAGGCGCAGGCACAGGCTCAAGCTCAGGCCAGCCAGCACCAGCAGGCGCAGCATCAACAGCAGCAGCATCAACAGGTGCATCAGCACCAGCAGGCCCAACAGCAGGCGCAGGCGCAGGCACAGGCACAGGCGCAGTTGCTGCACCATCAGAATATGCTGCTGACGTCGCCCGGTTTGCCGCCGCAACACGCAATCAGTCTGCCGGCAGCGGTCACCCCAAGTGGCATCCAATCGGTTGCAGGCAATCCAGCGGCACCGGGCAGCACTCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCGCCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCTCTGCTCGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGTCTGTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGACGGGAGGCGAGCAAGCGGCGACGCAGCACTGGCCCCAACCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCGGGCTCTGTCGGTTCATCGGTGGGCGGGGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAGAAGGAGGCGCTGCGTTTGGCATTTGCGCTGGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGCTTAGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCCCATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTATTTCGCAGCTGCTGCACTGCTCGGTCGCAGCCTGGCCGGCATACCGGGTGCGGCGGCTGCTGCCGGTGCAGCGGCAGCTGCGGCTGCCGCAGTGGGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAAGCATTCAAGGAACAGATGAGCGGCTTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGTGGCAGCCACGAGCCGGAGCATACACCCATCACCGAATACGAGAAGGCGTTGCAGAAATCGGCGCTCGCTTCGGCTGCGGCCGCTGCTGCATATATGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCGCAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCTGGCGTCGTTGCGAGCAACGCTGGCGTCGACATCGGCAGCAGCAGCAGCGAGCGGATCATCAACGGTGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGATGAGAGCGACAGCATCAAAGGTGGCGGCGGCGACTCCAATGCTGCCGATGCCGAGCACGACGATCACGCCCAGCTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAAGAGGACGACGAGGACGAACAAGCCCAGCAGCAGCAAAAGCAGCAGTTAGACGATGCAACGCCTCTCGACAGCGATGCGGAGAAGCAGCTCAACGTGATCAATGAGGAAAAGTTGCGTTTGGTGCGCGTGCGGCGCCTCAGCAGCAATGGCGATGCCGACGAGCACTGCGCTGCTGCACAGCAGGCGACGGCAGCCGGTGTGGCAGCGTCGCCGGCAGCAACATCATGGAACTACTAA
Protein Sequence
MTKSLSANHNESIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSTDLTSTHQHNDDEDDDDDNDNDNDNDNHAELRDDGDDDEEDTDMANEQQHAAIGNNRHNDDNEKDEDEEQDADLSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASETANASSDGEYIGSGYPRPPPTLAKCRNNKQQTQQQPLINANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAREQQQRLRHDELGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGATANPFPTAMAADENMRHVLEREIAKLQQQQAQQVQQAASFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPSLSHAARKSEGGNTPAPPAPSLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSVAGNPAAPGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPTAAGVVASNAGVDIGSSSSERIINGVCVMQGSDYNRDESDSIKGGGGDSNAADAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQAQQQQKQQLDDATPLDSDAEKQLNVINEEKLRLVRVRRLSSNGDADEHCAAAQQATAAGVAASPAATSWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00598669;
90% Identity
iTF_00552931;
80% Identity
iTF_00552931;