Basic Information

Gene Symbol
kn_1
Assembly
GCA_018904325.1
Location
JAEIFX010000088.1:1935466-1943475[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-139 5e-135 450.9 0.0 182 385 4 236 1 239 0.98
2 2 1.1e-06 0.0086 14.3 14.6 424 504 241 332 236 347 0.56

Sequence Information

Coding Sequence
ATGGCGCCAAACTTTTTTCTCAAATTCTTCTTGAAGTGCAACCAAAATTGCCTCAAGAATGCTGGCAATCCGCGGGACATGAGAAGATTTCAGGTTGTCATATCCACCCAAGTGGCCGTTGATGGACCACTGCTGGCCATCTCGGATAATATGTTTGTGCACAATAATTCCAAGCATGGCAGACGCGCTAAGCGATTGGACACAACGGAAGGTACAGGCAACTCATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCCGTGGCCACGCCCTGTATCAAGGCGATATCGCCCAGCGAGGGCTGGACAACAGGTGGCGCCACCGTGATCATTGTGGGCGATAATTTCTTCGATGGTTTGCAGGTGGTGTTCGGCACCATGCTGGTGTGGAGCGAGCTAATCACATCGCATGCGATACGGGTCCAAACACCGCCCAGACACATCCCCGGTGTGGTTGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTCGCTTTGTCTACGTCTCAGCACTCAACGAACCCACAATCGACTATGGCTTCCAGCGTCTGCAGAAGCTCATCCCACGGCATCCCGGCGATCCCGAGAAACTGCAAAAGGAGATCATACTCAAGCGGGCCGCTGATCTTGTTGAGGCTCTCTACTCCATGCCCAGATCGCCCGGCGGCTCCACTAGCTTCAATTCGTATGCTGGTCAGCTGGCGGTGAGCGTACAGGATGGCTCCGGCCAGTGGACAGAGGATGACTATCAGCGCGCCCAGTCGAGCAGTGTCAGTCCACGTGGTGGCTACTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGTGGCTCCTACGGGGCCACAGCAACCACCGCCAGCGTTGCGGGCACTGCGAATGGCTATGCGCCTGCACCGAATATGGGAACGCTCTCCTCCTCACCCGGCAGCGTCTTCAACTCCACATCAATGTCCATGTCGACGCCTTGGCATTCAGCTCTTGTGCAGCATCATCATCGACGCCCCCAAATGTGGCAACAACAACAACAGCAACAGCGAAACAATCTCATCGCGTGGCGCCTGTTGACATTGGGCAAGAAGAGTTCACTGATAGCAATGCTGCACTCAACCAACTCCAGCGATAACGACTACGGGGTCAGCAGCTTGAGCTTCAATCCATTTGCCCTGCCCACCTGCAATACACAGGGCTACAGCACCAGTCAGCTGGTGACATCAACCAAATAA
Protein Sequence
MAPNFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAGTANGYAPAPNMGTLSSSPGSVFNSTSMSMSTPWHSALVQHHHRRPQMWQQQQQQQRNNLIAWRLLTLGKKSSLIAMLHSTNSSDNDYGVSSLSFNPFALPTCNTQGYSTSQLVTSTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00521135;
90% Identity
iTF_00510322;
80% Identity
-