Basic Information

Insect: Drosophila multiciliata
Gene Symbol: -
Assembly: GCA_037043605.1
Location: JBAMBF010000536.1:4807065-4808758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00034 0.023 15.1 0.3 1 23 213 236 213 236 0.96

2 8 3.5e-05 0.0024 18.2 1.1 2 23 258 280 257 280 0.92

3 8 0.00012 0.0083 16.5 0.3 2 23 307 327 307 327 0.97

4 8 9.6e-06 0.00064 20.0 0.4 1 23 333 355 333 355 0.98

5 8 8.2e-06 0.00055 20.2 0.9 2 23 362 383 361 383 0.97

6 8 9.3e-08 6.3e-06 26.3 1.0 1 23 389 411 389 411 0.98

7 8 0.026 1.8 9.1 1.5 1 21 417 437 417 441 0.87

8 8 0.01 0.7 10.4 0.2 1 23 491 515 491 515 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00034	0.023	15.1	0.3	1	23	213	236	213	236	0.96
2	8	3.5e-05	0.0024	18.2	1.1	2	23	258	280	257	280	0.92
3	8	0.00012	0.0083	16.5	0.3	2	23	307	327	307	327	0.97
4	8	9.6e-06	0.00064	20.0	0.4	1	23	333	355	333	355	0.98
5	8	8.2e-06	0.00055	20.2	0.9	2	23	362	383	361	383	0.97
6	8	9.3e-08	6.3e-06	26.3	1.0	1	23	389	411	389	411	0.98
7	8	0.026	1.8	9.1	1.5	1	21	417	437	417	441	0.87
8	8	0.01	0.7	10.4	0.2	1	23	491	515	491	515	0.91

Sequence Information

Coding Sequence: ATGGAAAGTATCGATGATGAGATTGAGGCACCAGACCAAGTTAATATAAGTGTAAATGCGCAGACATGTCGCGTTTGCCTGGAGTCCCACGAAACCACTTTATGCCTTCGCGATCAAATTGAGTTTAACGACCTGAACTTAgagctgtggcagctgttggAGAACGTATCCAATTTGAAgTGCAACTGGAACGAACCGAATCTACCCACACAGCTGTGCCAGAGCTGCACACGTCGCCTGATCAGTGCCTATGAGTTTATACGCGACGTCGAGAAGTCCAATGAGACGCTTCAGGAATTGTGCAGCCATCTGGAGCGGGAGCTGTCAGCTGCTACCGTTGTCGATGTGGACGAGTACGAGGAACTAGTGCAAGATGAAGATCAGTTTGTGCAGTTGGATGAATGCGAATCCGTCATTGAACTACACGAGGAAGAGGGGGAAGCGGAAGTGGAAGCGGAGTTAGAACACCCAGAGGACACACCATGTGCGGAAAAGCCCATCCTGAGCAATGACAATGACGAACCGAGCGAACTTGTACAAGAAGACTCCGAGGCAGAGATAAGTTTTGAGCCCGATCTTTTGGAAGAGCGTCCCTCACAGCTAGGCATGCGACTGGCACACTCTCAAAACTACATGTACAAATGTGCCAGTTGTCCACGGAtctttgctaaaaataaatcgctGGCGCGCCACTTTGCCACCGCACACAGACAAGCGGCAGATGTTGCCGCCCAAGAGCTGGCCAGagagcacagcagcagcggtgccCTCATCTGCGAACATTGTCCGCGATTGTTTAAGCGTCAGGATACACTGCGTCGTCATCTAATTGCATTTCATCCGGAGGTGGTCGCCGCCAGTGGCGATGTCCACGATGTTGCCAAGATCGTACCGCCCAAGCGTGCTGCCAAGCGCCGTGAGTGCCCCCATTGTGGCATTAGCTTTCCCGTCTCCAGTCTAACGATACACATACGACGGCATACCGGCGAGAATCCGTACAAGTGCGACGAATGCGATAAGGCATTTCCACGCGGCCAGGATCTGAATCTGCACAAGCGCCAGCACACCGGCGAGCGACCAAGCGAATGCAAAATCTGCGCAAAGAAATTCATTTCGCAAAACAAACTGGCGCGTCACATGCGCCTCCACACGGGTCATCGTCCCTATGCCTGCGACAAGTGCGACAAGAGATTTGTGCAGTCCAATGATCTGAAGATTCATATGCGCCGGCACACGGGCGAACGACCCTACTCATGTGGCGTTTGCGACAAGAGTTTTGTGTGCGGCTCCCTCTTGAACATTCATCGCAACCAGAAGCGACACCATGAGACTGGGCGGGAGGGCGTGGATTACCCCGATCCCGTCGATCCCTATGAGAACAGTCGCGTGAACAAGCGACGAGCCGAGGACATTGAACGGATGCGACTCCAGCGGGAGGGCGAATCGGTGCCACCCATTTTACTGCGACCCTATAACTGTGGCGTCTGCGGGGATACATTTAAGAGTGGCGCCTTGCTCACGATTCATCGGAATAAAATGTCCCACTATGAGATGGGCAAGGTGGACTACGGTGATCCTTACGAGCAGCGatataagcagcagcagcagcaaagcgaAGATTAA
Protein Sequence: MESIDDEIEAPDQVNISVNAQTCRVCLESHETTLCLRDQIEFNDLNLELWQLLENVSNLKCNWNEPNLPTQLCQSCTRRLISAYEFIRDVEKSNETLQELCSHLERELSAATVVDVDEYEELVQDEDQFVQLDECESVIELHEEEGEAEVEAELEHPEDTPCAEKPILSNDNDEPSELVQEDSEAEISFEPDLLEERPSQLGMRLAHSQNYMYKCASCPRIFAKNKSLARHFATAHRQAADVAAQELAREHSSSGALICEHCPRLFKRQDTLRRHLIAFHPEVVAASGDVHDVAKIVPPKRAAKRRECPHCGISFPVSSLTIHIRRHTGENPYKCDECDKAFPRGQDLNLHKRQHTGERPSECKICAKKFISQNKLARHMRLHTGHRPYACDKCDKRFVQSNDLKIHMRRHTGERPYSCGVCDKSFVCGSLLNIHRNQKRHHETGREGVDYPDPVDPYENSRVNKRRAEDIERMRLQREGESVPPILLRPYNCGVCGDTFKSGALLTIHRNKMSHYEMGKVDYGDPYEQRYKQQQQQSED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01320633;
90% Identity: iTF_00522393;
80% Identity: -