Basic Information

Gene Symbol
-
Assembly
GCA_037043605.1
Location
JBAMBF010000536.1:1998993-1999981[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-12 1.1e-08 35.2 0.0 12 89 142 209 134 209 0.82

Sequence Information

Coding Sequence
ATGCACAATCTTAGAGAGCACATGCGGTGCCGTAGAAGAGGATGCACCTATACCACAAACAGGGCATACAATCTGGAGCGCCATGAGCGTAACCATGACAAGGGCAAGGTGCCAGTGTCGCAGTACCAGCAGTGTCCACATTGCACCTATGCCGCCGGATCGCTTCACAATCTAATGCGGCACATAGGCAAAAAGCACGCAGCGCTGAGTGGAAAACTGATAACAAAGCAACAGGCTATAACTAGTCAACATGCCGAAGAGCAAAAATTGCCGTCTTCGACTGAGGTGGTGTTTGAGTCACTACCTAACTGTGAGGAACCTATTCCAGAGCAAAAGCGCCCAGTGCCAGAATCCGAATTACTGCAATCAGGGGCCGATTCATCGCTTTGGTTTTGGAGCACACCGCAGCAGAtggaaaagaatttttatagGCGTAGTGCTCTGAAGAACGAATGTAAATTACAGGGACGTTCTATTAAGTTGTTCAAATTTTATGCCTTGGTTAGAGCGAGAGGTGGTGCCTTGAATGTGGACCAATgggatgatgttgctgctgccctGGGCCTGCCGTCGGGATCAGGTTGCCAAACCCGCCTTAAGTACATGGCGTTGTTGTACGAGTTCGAGAAGAAAGAGGAAGAACGTTCGCAGGAGTGGAAGAATATGGAAGGGGTGCCTTATTGGTGGGATGATGGcgattttgttataaataacatGCATTTTACATCCAGCTATGAGCAGTGGAAACACATGTATTTGCCATCAATAACTGTTCGCAATGCGATTGTAAAAATGATTTACCTCAAGTATTATGCGAAGCACCTAAATAGTAACAAACCGTTTCAACGTTTTCACATGAAGGATTCCTGGCTGAGGGCAACAATGTTAAATTATCAAGCGCTAAAGTGTGAACTGCATTCTATGCATTGTTAA
Protein Sequence
MHNLREHMRCRRRGCTYTTNRAYNLERHERNHDKGKVPVSQYQQCPHCTYAAGSLHNLMRHIGKKHAALSGKLITKQQAITSQHAEEQKLPSSTEVVFESLPNCEEPIPEQKRPVPESELLQSGADSSLWFWSTPQQMEKNFYRRSALKNECKLQGRSIKLFKFYALVRARGGALNVDQWDDVAAALGLPSGSGCQTRLKYMALLYEFEKKEEERSQEWKNMEGVPYWWDDGDFVINNMHFTSSYEQWKHMYLPSITVRNAIVKMIYLKYYAKHLNSNKPFQRFHMKDSWLRATMLNYQALKCELHSMHC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482016;
90% Identity
iTF_00511059;
80% Identity
-