Basic Information

Gene Symbol
Ubp1
Assembly
GCA_037043605.1
Location
JBAMBF010000589.1:5177757-5188993[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.25 2.1e+03 -2.4 2.1 94 133 27 64 15 82 0.55
2 3 5.5e-53 4.7e-49 166.6 0.8 17 189 398 567 381 576 0.87
3 3 3.2e-13 2.7e-09 36.6 0.7 188 221 616 649 606 651 0.89

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCAAAGTTCCGGCCTTTTGGATATAAAAAGCTTATTTGATCCACAATAttcattacaacaacaacatcaacaagtaaatcaaaatcagcaacatcaacaacaacagcaacaacagctttaTTTGccatcacaacaacaacatcaacaacaacaacaacattatcaAATATCACACATATCAACGAAATTTGATTTGAGCATTTTCAACGATTTCGACCAAATggaatttaataacaatttgagTCGAAACCAAAATCAGTACcagaataacaataataataataacagtaacgataacgataataaCGGTAgcatcaacaataataacaacaacggaGAACATTTAAATCAGGTTCAAAATCGTCATTTCATGAGCGgctatcatcatcagcatatTGGATCGGACTATGAGCAAGTAATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCTTGGACAGACGCACAGTGCAAGGATTCACCAGGACCCCATATTATTGACGTACGAACAATTTACTCGGAGAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGCCGACAACACAATCGGGCGACATACCCAATAAGGTGGCACATCTGGAGAAAGATAAACACAAACGTGAAAAGCATTCAGGTCGCAGCAGTTGGAGCGATGATATTGGCTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAACTTTTTGGCCTTCTCACCGGGCATAACGGCACTAAAACAGGAGCCGCAAACGGAGCAGCTAAAACCGACTACAAAGCTACCCTTGGACAGCAGCTCTGGGAAGATCGACAAATCGCCATTGGGCGACGCCAATCATTCACCACAGCGCCCGGCGCAATCCCTGGAAGTGATTGGCTCTGGATCAGGAACAGGAACTGCTGGTGGCAACAGTAGCAGCGAAAGCGGTGGCAAGCATGAGTTGAACTCCGGTATCATATGCGGCTGTGGCTCACCCCAAGGCTCGCCAGCCTCAACGGAATTTGAACTgaatgcagctgcaactgacAAAACCATAGCTGCATCTGGCAACGACGGTTTTGCCCTGGCGCCACGCTctgagctgcagcagcaggtgagCGCTGTCGAAGCGGCCAAAATTGAGCCAAGCTCATCCACTGGTGCATCACATGCCGAGGACCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCTACAAAGAACAACGAGGAAACTTTGACTTATCTGAATCAGGGCCAAAGCTATGAGATcaaattgaagaaaattgGTGATTTATCATTCTACCGCGATAAGATTTTAAAGagCGTTATCAAAATCTGTTTCCATGAGCGACGATTGCAGTTCATGGAACGCGAACAGATGCAACAATGGCAAGCATCGCGGCCTGGTGATCGCATCATTGAGGTGGATGTGCCATTATCGTATGGTTTGTGCCACGTGTCGCAGCCATTGAATTCGAGTGCATCGAACACGGTGGAGATCTTTTGGGATCCATTCAAAGAGGTCGGCGTCTACGTCAAGGTCAATTGCATTTCAACAGAGTTCACGCCCAAGAAGCACGGTGGTGAAAAGGGTGTCCCATTTCGTCTACAAATTGAAACCTATATTGAAAACTCACCAGCAAAtagcagcaacattaacagcagcagcaacagcagcagcggtgccagtgccaacagcaacaacaataacaacaacacgagcaacacaacaactagcaacaacaacaacacatcaGGGGGCACATTGGACAATCGTGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCTTGTCAGATTAAGGTCTTCAAGTTAAAAGGCGCCGATCGCAAGCACAAGCAGGATCGTGAAAAAATCCAGAAGCGTCCAACATCTGAGCAGGATAAATTCCAGCCCAGCTACGAATGCACCATAATGAATGACATATCATTGGATCTGATAACACCAACCATCACTACAGGCTGCTACAGTCCCGAATATATGAAACTGTGGCCGAATTCGCCGGTGCATGTACCAAAATACGATGGAATGCTTCCATTTGCAAGCAGTGCATCTCCAGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTGTCGCCGCCGCATGTGCCAGCTGATATGGAAGACTATAATCAGAACATAATGCCGGACTCAACACCGGCCCAAGTGACACAATGGCTGACCAGTCATCGTCTGACGTCGTACATAGCCACATTTACTCATTTCTCAGGCGCGGACATTATGCGcatGTCCAAGGAGGATCTTATTCAAATCTGTGGACTCGCAGATGGCATACGCATGTTCAATATATTACGTGCCAAAACTATTGCTCCAAGGCTGACTCTTTATGCGAGCATGGATGGCTACAGCTACAATGCGATCTACTTGCTCTCAAACACGGCCAGGGAGTTGCAGCAGAAGCTGTACAAGTTGCCAGGCTTTAACGAGTTCATCGCGAAGGGTGGCTCTTTGGAGAATGGCGGTGCTGTAGCCACAGCTGGTGCAGCGGCTGCTTCTGCCGCACTCTACAACAATTGGGGCATGTATTCAAAATACTCTGGCAGCGGCTCGAACATATTCAATGAGGTTAACAAGAGTTGCGTGTATATTTCGGGTCCGTCGGGCATTCTTGTCTGCGTTACCGACGAGGTGCTCAACAATGAGATCAAGGATGGCAGTCTCTATTCCCTGGATGTGCAGGGCGGCAAAGTTGTCTTGAAATTGATCAATAAGCAggataacaattaa
Protein Sequence
MALSFLSQSSGLLDIKSLFDPQYSLQQQHQQVNQNQQHQQQQQQQLYLPSQQQHQQQQQHYQISHISTKFDLSIFNDFDQMEFNNNLSRNQNQYQNNNNNNNSNDNDNNGSINNNNNNGEHLNQVQNRHFMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDAQCKDSPGPHIIDVRTIYSESGSRKRRMDWDSLDIGQSENSPTTQSGDIPNKVAHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPGITALKQEPQTEQLKPTTKLPLDSSSGKIDKSPLGDANHSPQRPAQSLEVIGSGSGTGTAGGNSSSESGGKHELNSGIICGCGSPQGSPASTEFELNAAATDKTIAASGNDGFALAPRSELQQQVSAVEAAKIEPSSSTGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLNSSASNTVEIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSPANSSNINSSSNSSSGASANSNNNNNNTSNTTTSNNNNTSGGTLDNRAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPTSEQDKFQPSYECTIMNDISLDLITPTITTGCYSPEYMKLWPNSPVHVPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMEDYNQNIMPDSTPAQVTQWLTSHRLTSYIATFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGYSYNAIYLLSNTARELQQKLYKLPGFNEFIAKGGSLENGGAVATAGAAAASAALYNNWGMYSKYSGSGSNIFNEVNKSCVYISGPSGILVCVTDEVLNNEIKDGSLYSLDVQGGKVVLKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00497147;
90% Identity
iTF_00576108;
80% Identity
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