Basic Information

Gene Symbol
grh
Assembly
GCA_037043605.1
Location
JBAMBF010000306.1:945385-975821[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.31 2.6e+03 -2.6 5.7 78 115 241 279 176 301 0.59
2 3 1.3 1.1e+04 -4.7 2.8 9 17 552 560 529 577 0.47
3 3 2.7e-63 2.3e-59 200.3 0.5 24 221 691 883 677 885 0.94

Sequence Information

Coding Sequence
ATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGCCACGGCGCTATAGCTTGGAGGCTGCACAGCATGCAACGCCGCCCCCGCCATCAGCAacgccacagcaacagcagcagcagccgcaccagcagcagcatcagcatcagcaacttcatcatcagcaacagcagcatccacatccacatccggAACCACATCATCAGCTTCAAGCACACCATCTtaatcatcagcagcaacatcatcagcattaTGCGAGTCAATCGCCACCGCATTACTCATATGTGGTGCCGCCCAAGGATTCAGCAGCTCAGTTGCAACTTCATCTGCCACTGACCGCCGCTGGGCTTATGCAATCGGTGGCCGATGAGATTCAACTAAGCGAACAGCAATCGACACAGCCGCCAGCGGCACCGCccccaccaccgccgccgccgctgccgccaaCAGCACACgcctccaactccaactatGCGGTCTACAGCTACTACCGAGATGTCGATGTGGATGTCGATGTGGAtgtcgagcagcagcagcaggagcagcaacacaaTTCTAGATCACAACAAGATCAGCAGCTACTGTGGAGCAATTCGAGCAGCACCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTTTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGTgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacagcaacagcaacatcagcagcaacagcagcatcaacagcagcatcaacagcagcagcagcagcaacaacagcaacaacaaccgccaCATCCCAGCGACATTGTGACCATAACAACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCAGCagtacaacagcagcaacagcagcagcagcaacaattgctgagCATCAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGTGCCGCAGCAAACGGTTCAGTCATTACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacaacaacaacaagtgaaaCTGCAACTAGTCCCGCCAGCGCCACAACAGATCTCGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTACATCACAACGGATAGCTATGGCATGTATACGGCCACAAGATTGCCACCAGGCCCACCGCCCGCCACCACATTCATAACGGAACCCTATTACCGGGAATACTTTGCGTCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCACGCAGCCTCTACGGCGAGGATGTATCCGTGGCTGCGGCCACACAACCACAGCCCGTGGGCGGTGTTTACGAGGCGCGATTCACCAGCAATGGCCCAACCACAACCACAGTGCTAACCAGCAGCAATGCACACCACCAcagtcaacaacagcagcaacagcagcaacagcagcagcagcagcaacaacagcaacagcaaccgcagcatcagcagcaggaacaatCGGTCAAAAGCGGCGGTACTCCACTATATGCCAAGGCTATAACCGCGGCGGGTCTCACCGTCGATTTGCCAAGTCCCGATTCGGGCATAGGAACGGATGCAATTACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGATTACACGGAACTTTGTCAGCCGGGTTCCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTCAACAGCATGCAGCAGCGCACTGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACAAGCACAAATGGCTCGACACGCTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatcTTCACAAATGTGGGCTTCCGTTATAATTTGGAGAGCCCCATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTACGGCATAACACTGGAATATGTGCATGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATCGCAGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTCAAAGGTCTGCCGTTGCACGTGCAAATCGATACGTTTGAGGATCCGCGGGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGTAAGACGCGCGATGAGGAGCGTCGCGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAGGACCTGGCCAAGCCGCCAGTACTCTTCTCGCCCGCCGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCGTTCTTGTTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCCATGTCCGATTTTGGGCCACCAATGAAGCGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGTTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCACTCCATGTGGTGCCCCCGACCACCATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatatatcGCACAAATAAGAAGGGAATTACGGCGAAAATTGATGATGATATGATTTCCTTCTACTGCAACGAGGATATTTTCTTGCTGGAAGTCCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACCGAGCTGCCCAATCAGTAG
Protein Sequence
MQDATSSYAISYTDWIAEPRRYSLEAAQHATPPPPSATPQQQQQQPHQQQHQHQQLHHQQQQHPHPHPEPHHQLQAHHLNHQQQHHQHYASQSPPHYSYVVPPKDSAAQLQLHLPLTAAGLMQSVADEIQLSEQQSTQPPAAPPPPPPPPLPPTAHASNSNYAVYSYYRDVDVDVDVDVEQQQQEQQHNSRSQQDQQLLWSNSSSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQHQQQQQHQQQHQQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATAFEISDKTAAAATTTTTTSETATSPASATTDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFASDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQPQHQQQEQSVKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSMQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
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