Basic Information

Gene Symbol
grh
Assembly
GCA_035047565.1
Location
JAWNPK010000060.1:10499734-10538648[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.65 4.2e+03 -3.1 3.3 94 135 199 222 180 243 0.48
2 5 1.7 1.1e+04 -4.5 2.2 8 76 469 537 464 541 0.67
3 5 0.34 2.2e+03 -2.2 4.5 77 110 704 741 651 788 0.58
4 5 3 1.9e+04 -5.4 2.6 95 100 1021 1026 999 1042 0.46
5 5 5.9e-63 3.8e-59 199.8 0.4 24 221 1157 1349 1143 1351 0.94

Sequence Information

Coding Sequence
atgtcCACATCCACGGCGACAACGAGCGTCATTACGTCCAACAACGATCTATCGCTGTCCGCCCACGCACACGCCCATCAGCaacacggccacgcccacggccatacgcacacacactcgctgcatccgcacacgcacacacacacacatcgccTGGGCGTCGTtgggggcgtgggcgtgggcgtcgGCGTTATCGGCGGCGTCGGTGTAGTGGGTGGCCATCTGAGCGACGCCTCACTCTCGCCCATCCAGCAGGGCGCCAACATCgtagccagcagcaacagttcgCCCCTGGGACAGAACGGCGTGCCGCTCCTAACCACAATGCATCGATCGCCGGACAGTCCGCAGCCGGAGCTGGCGACCATGACGAACGTGAATGTCCTCGATCTGCACACGGACTCGGCCAAGCTGTACGACAAGGAGGCCGTGTTCATCTATGAGACGCCCAAGGTGGTGATGCCGCCGGACGGCGGTCCGGGCGGTGGCAATGGTGGCGCTGGTGGCGGCTCGAATGGCGGCCATGACGATGGCCAGGTGATAGATGCACGCATCGCGGCACAAATGAGCTcccagcatcaacagcagcagcagcagcaacaacagcagcaacagcagcaacaacaacagcagcaacagcagcagcagcaacagacggAGCATCAGCCGCTGGCCAAGATCGAGTTCGATGAGAATCAAATCATACGCGTTGTCGGTCCCAAcggggagcagcagcagatcatCTCGCGGGAGATCATCAATGGCGAGCATCACATCCTCTCCAGAAACGAGGCGGGCGAGCACATACTCACGCGCATCGTTAGCGATCCGTCCAAGCTGATGCCGAACGACAATGCGGTGGCCACCGCCATGTACAACCAGGCCCAGAAGCTGAACAACGAGCATCAGGCTGTCTATCAGACCTCACCCCTGCCCCTGGATGCCTCGGTGCTGCACTATGGCAACGACAATGTGATCAAAACGGAGGCAGAGATCTACGAGGATCACAAGAAGCACGCTGCCGGCGGTGGCTCCATCATCTACACCACGTCCGATCCGAATGGCGTCAATGTGAATGTCAAGCAGCTGCCGCATTTGACGGGCGTGCCACAGAAACTGGATCCGGAGCTGTATCAGCCGGACAAGCACATCGATTTGATCTACAACGATGGCAGCAAGACTGTCATCTACTCCACCAGCGATCAGAAGGGCCTCGAGATCTATTCGGGCGGTGATATTGGCAGCCTCGTCTCGGACGGTCAGGTGGTGGTGCAGGCGGGTCTGCCCTATGCCACAACCACCAGCGGCACCGGACAGCCCGTCTACATAGTCGCCGATGTCGAGGAACATTTACAGGGCCTCAACCTCGGCAACAGCGCCTGGCAATTCATTttagagcagcagccgcggcagcagcagcagcagcagcagcaacagcagccgccatcatcatcatcgtcgtcgtcgcgcTTTTGGCAGTCAGTCCATCAGTCCATCAGTCCATCAGTTCGTCAGTTCGTCAGTGTCATAGCCCTACCTGTTAGACGCAGCAGCTACAGCCTAGACgcgcagcatcaacagcagcagcagcaactccatcatcaacagcagcaactgcagcaacatttGCCGCAGCATCTACCTCAGCATCATTATGGCAATGGCCAATCCCCATCGCCTTACTATGAGCCGCccaagcaggagcagcagcagctgcaacacctGCCGCTCGCTGCCGCTGGGCTAATGCAATCGGTGGCAGATGAGATACAATTGagcgaacagcagcaggcaacacCGCCGCccccagcaacagttgcagcagccagCGATGCAGCATCGCTTCCcaatgctgctgccgccgccgccgctgcctcctcctcctcctcttcgtATGCTGTCTACAGCTACTACAGAGATGTCGATGCGGAGCAGCACAATAACAGatcacaacagcagcagcaacaacagcaacttgtGTGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGTCCGCCACAACCGGCGTTGTctccacaacaacaatctcgcatcaacaacagcaacaacagcagcagcagcaacagcaacaacaacaacagcaacagcagcagcaacagcagcatcaacagcagcagccgcctcaTCCCAGCGACATTGTGACCATAACCACGGCAGGAGTGGGGAGCGCGGGCTCGATCGTCTCcgctgcagtgcagcagcagcagcaacagcaacagcaacagcagcagcagcagctgctgagcaTCAAACGTGAGCCCGAAGACTTGAGCAAGGATCCAGCCAAGAATGGCAGCCTGGGCGCCTCAGCGAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAAGTGAAGCAAGTggggcaactgcaactgcaactgcaactgcaactgcattcGATATAGCCAATAAAacggcaacagctacagcagctacagcagccacagcagcagcaacagcaacaacagcaacaacaactgcaactgcaactagtCCCGCCAGAGCGACAGCAGAACTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAGCAGCAATGGAACCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCGGGTCCATATATCACAACGGATAGCTATGGCATGTACACGACGACACGACTGCCACCTGGACCGCCACCTGCCACCACATTCATAACGGAGCCCTACTATCGTGAATACTTCGCGCCCGATGGCCAGGGCGGCTACGTGCCAGCGGGCACGGCGCGCAGCCTCTACGGCGAAGATGTTTCCGTATCGGCGGCCGCCCAGCCGCAGCCCGTGGGCGGTGTCTATGAGGCGCGCTTTAGCAGCAATGcgcccaccaccaccacagtGCTAACCAGCAGCAATGCACACCATcacagtcagcagcagcagcaacagcagcagcagcaacagcagcaacagcaacagcagcaacagcagcaggaacagtcGGGCAAAAACGGTGGGACGCCGCTCTATGCGAAGGCTATAACTGCGGCGGGTCTCACCGTGGACTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTATACGGAACTGTGTCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTTTCAGTGAATAGCATACAACAGCGCACCGTGGTCCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACGAGCACAAATGGCTCGACACGCTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTACCATCTGGAGAGCCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCATAGTCGCCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTCGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAGAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCACGCGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGATGAGGAACGACGCGCGGCCAAGCGCAAAATGACAGCAACTGGACGCAAGAAGCTGGACGAGCTCTACCATCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCTGTGCTCTTCTCGCCCGCCGAGGACATGGAAAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAATTGAAGGGTGCTTCGCCTTTTCTGTTGCACGGCCAGAAggtggccacgcccacgctcaaATTCCACAATCATTTTCCGCCCGACATGCAGACtgATAAAAAGGATCACATATTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCACCCATGAAACGGGGCCGCATGACGCCGCCGACCACGGAGCGCGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGTTGCATGTGGTGCCGCCGACGACGATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatatatcgCACAAATAAGAAAGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATCTTCTTGCTGGAGGTGCAACAGATCGAGGATGATCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAGTAG
Protein Sequence
MSTSTATTSVITSNNDLSLSAHAHAHQQHGHAHGHTHTHSLHPHTHTHTHRLGVVGGVGVGVGVIGGVGVVGGHLSDASLSPIQQGANIVASSNSSPLGQNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSAKLYDKEAVFIYETPKVVMPPDGGPGGGNGGAGGGSNGGHDDGQVIDARIAAQMSSQHQQQQQQQQQQQQQQQQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKLNNEHQAVYQTSPLPLDASVLHYGNDNVIKTEAEIYEDHKKHAAGGGSIIYTTSDPNGVNVNVKQLPHLTGVPQKLDPELYQPDKHIDLIYNDGSKTVIYSTSDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSGTGQPVYIVADVEEHLQGLNLGNSAWQFILEQQPRQQQQQQQQQQPPSSSSSSSRFWQSVHQSISPSVRQFVSVIALPVRRSSYSLDAQHQQQQQQLHHQQQQLQQHLPQHLPQHHYGNGQSPSPYYEPPKQEQQQLQHLPLAAAGLMQSVADEIQLSEQQQATPPPPATVAAASDAASLPNAAAAAAAASSSSSSYAVYSYYRDVDAEQHNNRSQQQQQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISHQQQQQQQQQQQQQQQQQQQQQQQHQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQQLLSIKREPEDLSKDPAKNGSLGASANGSVITQKILRVDAARSEASGATATATATATAFDIANKTATATAATAATAAATATTATTTATATSPARATAELEMYATTGGTQIYLQTSHQSSNGTSTQQSTLQAQSPSPGPYITTDSYGMYTTTRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAAAQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-