Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_003086615.1
Location
LUVX01045219.1:12686-14355[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.2e-08 7.9e-05 22.7 0.0 4 38 298 335 295 336 0.87
2 2 1.7e-08 1.8e-05 24.8 0.3 3 43 391 436 389 438 0.81

Sequence Information

Coding Sequence
atggAGCTGCACACCAGAACAACACTTTCGGCATTACTATTTGGCCTATTGCTATTATGCGGNNTGGAGATTTTCGATCTCATCGAAGAGGTCAACAAGAACTTCTACGAGTTTATGGGTATCAATCAGACTGCCACGAATAATGAAATAAAGCGCGCCTTTCGCACCCTTTCAATTGTGCTGCATCCGGACAAGAATCCGGCCGAGGATGCCAATATCCAGTTTCGCAATCTTGTCTCCATCTACGAGGTGCTCAAGGATGGATCCAAGCGCGAAAAATACGACAAGGTGCTGCGCGACGGTATGCCCAACTGGAAGTCCGCTCTCTATTATTACCGCAGGATGCGTAAGATTGGTCTATACGAGGGTGCCTTTATTATATTCCTGATCATCACCGTTGGCCAGTATATGTTTGCCTGGGCAGCTTACTTGGAAAAGAAGTACACAGCCGAGCAGGTATTCGGCAGCAAGCTTAAAAAGCTGCAGaagcgcaacaaaaacatcGACATGGATGTCATTTTAAACGAGATCCCAATGCCATCACTACTCAATACGCTGCCAATTCAAATACCAGTAGCCATCTGGAATCTGCcgaagacaataaaaaatgcattcagcAAAGCCAACGAACTGAAGCAGTTGGCATTGGAAAAGCGCAGACAGGAGATCGAAGCGGCACGTCGCCAGGAGGAACTAGAACGTGAGGCTGAAGAGCAGGCGCGTCTGCGTAAGGAGCAGAAAGAGAATCTGCGCAAGCGCAAGCAGAACACAAGGGCCCCTGAGAAGACCGAGGAGGAGTTACGCGGTTATTCACAAATCCAGGCGCGTGAGCTAACCGAAGATGACGCAATACGTCCAGTTTCCCAAAAGACTACGGTTAGCGGCGGCTTTTGGACAGATGAGGATCTGACGGAACTTATTAGACTTGTAAAGAAATATCCAGGCGGTGCGGGCAGTCGCTGGAATACCATAGCCGAGTCCATGAATCGCACCGTCCAAGAGGTGACATTCATGGCGGCCAAAATGAAGGAGAACGGCTATCGTATACCAGGACAAACGGATAGCGTTGCCGAGAACATAGTCCAGGATTCACAGGAGGCGGTGCGCAAGGAAAAGGTTAAAAAGGGCACACCAACTGTCAATGAGAAGAGCATGCTTATACCAGAGACTAACTGGTCCCAGGAACAGCAGCGCGCTCTGGAGGCGGCCATCGTTAAATATAGGAAAACCACCGGCGGCGATCGTTGGCAAAAGATTGCCAACAGTGTGCCAGAAAAGACCAAGGAAGAGTGCTTGGTGCGCTACAAATACTTATGCGAACTGGTCAAAACACAGAAGAAAGCCGAGGAGGAAGAGGCTGAGCCGTCCACTATTGATGAGGAGGCTGCAGTGCCCGAGGAGAAAGATGAGCCGGAGGCGACAACAGcaattgctgcggctgcaccTCTACAGCCAGCCAAAAAGCTGAGCAAACGCGAGCAGCGGAGACGCAAGCGCGACATTTCCAGCGACGAGGATTCTGATGATGCATATCAGTACGAAATCAGTTAG
Protein Sequence
MELHTRTTLSALLFGLLLLCGXEIFDLIEEVNKNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNPAEDANIQFRNLVSIYEVLKDGSKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFIIFLIITVGQYMFAWAAYLEKKYTAEQVFGSKLKKLQKRNKNIDMDVILNEIPMPSLLNTLPIQIPVAIWNLPKTIKNAFSKANELKQLALEKRRQEIEAARRQEELEREAEEQARLRKEQKENLRKRKQNTRAPEKTEEELRGYSQIQARELTEDDAIRPVSQKTTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRTVQEVTFMAAKMKENGYRIPGQTDSVAENIVQDSQEAVRKEKVKKGTPTVNEKSMLIPETNWSQEQQRALEAAIVKYRKTTGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEEEAEPSTIDEEAAVPEEKDEPEATTAIAAAAPLQPAKKLSKREQRRRKRDISSDEDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00490711;
80% Identity
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