Dmon014277.1
Basic Information
- Insect
- Drosophila montana
- Gene Symbol
- bab1
- Assembly
- GCA_003086615.1
- Location
- LUVX01001385.1:30777-32876[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-10 5.1e-07 29.4 0.0 1 44 323 366 323 367 0.91 2 2 7 1.9e+04 -5.0 1.3 4 15 473 484 473 486 0.72
Sequence Information
- Coding Sequence
- ATGGGCGGGCCGACGCCAGTGGCCAGCAACGAGGGTCAGACGTATTGCTTGCGCTGGAACAATCATCAGACGAACCTGGTCCAGATACTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACATTGGTCGTCGACGATGAGCAGTTCAAGGCGCACCGCGTTGTCCTCGCGGCCAATTCGCCCTACTTTCAGTCCATACTCCAGGAGGTGCCGCAGGATCAGTGCAGCATCATACTGCCGGGCGTTAAGGGCTTCGAAATTGCCGCCCTGCTCCAGTACATGTACACGGGCGAGACGACAGTGACCAAGAGCCAGGAGCCAGAGATATTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGCCTCTACGACAATCTCATGAAGTTCAATCACAAGGCATCCACTCCGACGGTCGACGACCGTTCACAAAATCATCACGGAGCACCTATCAACATCAACGCTCACATATCCGCTGGCGAGGCACCGCTGACGCCCACACACTCAACGCCCCATCCAGCTGCCGGCGAGGCTGGCCAATGGCCGCTCTCTCCGTCCgccgcggcggcggcaatgctCAATTCGGTGTACGAGTCGGCGGCGGACATGAATCCGCTCAAGCGCAAGAAGCTCTCGGCCATTTCGAGCATGCTGTTGAACACCACACGGGACACGCCCATTCTGCGCAATGTGCTGGCCCAGGCCAACCCGCCGGACTCGTCGCAGCCCAATccgcagcagttgctgctgcccggcGTCAAGCAACCCGCCGAGAAGACACCCAcccatcagcatcagcatcagctgggcagcggcagcgctgcGGGCGCTAGCAGCCACAGCTTCAATGGGTCCGACTATGGCGGCGACAAGGAGCCGCTGTCGCCGCACACGGATCGCTCCTTTGACGAGGAGACAGGCGGCCAGGGTGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAATACACCCGGGCGGACATGATGTGCGCCATTCAGTGTGTGCGCGAGGGCATGAGCGCCCTTCAGGCCAGCCGCAAGTTCGGTCTGCCGAGCCGCACGCTATACGACAAGGTGCGCAAGCTGAACATCACCACCGGCCGTGGCACCCATCGCACGCCCAAGCGCAGCCCACCTGGCGTGGGCGGCGTCGAGTCATCGGCCGCATTCCCCTATTCAgccgcggcggcggcagctgcggcggctgctcaTAACTACGGCCAGACGGAGCTGGAGCGCGAGCCGAAGGAGCACGGACATGGCCAGGGCGCTGGGCATGCCCATGCTCATTCCGGGCATCATGGTATGCCGCCGACCATTCCGCATTCGGCTGCCGCCTTGCTGGATCACGCCTTCCTGCAGCAGGCGCTAGAGAATCGTGGCGGCGATATCGCTGGACGGGAGGCGTTGCACGCCATGGCCCTGGCGGCAGCCGCACACGCGGCGGCCAATCGGATGTCTAGCAGTCCACCGGGCTCCAATGGGCATGCGGCCCGTTCGCCCAGCCACTATGCCGACCAGGAGGCGCTGGACAAGCACGAGCATCGTCTGATCAAGCGCGAGGCCATTGAGGAGGAGCGCGACGCTGACGACGAGGATGATCACGACCAAGTGGAGGATCTGTCGCTGGCACGCAAAGAGCGTCCCGAGTCGCCCTACTCGCCACCCCCGCCGCGCGCTGCCTCGCCCATGGAGAGTGCCAGCGTAATCATGCACTCCAACTCGGCATCGGTCTCAGCGAATGGCAAGGAAGCGCATGAGCATGAGCTGCAGCcggaacaggagcaggagcaggaccaGGAACACGAGCTGGAGGACTATAGCGAAGCGGCATCACCAGCATCGCAGCCCCTGAGCATGGGCGTGGCTCTGAAGCGCGAGCTGCTCGGCAGCGATGAGGCACAGGCGCGCACCGACTGA
- Protein Sequence
- MGGPTPVASNEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQSILQEVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKASTPTVDDRSQNHHGAPININAHISAGEAPLTPTHSTPHPAAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNTTRDTPILRNVLAQANPPDSSQPNPQQLLLPGVKQPAEKTPTHQHQHQLGSGSAAGASSHSFNGSDYGGDKEPLSPHTDRSFDEETGGQGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGGVESSAAFPYSAAAAAAAAAAHNYGQTELEREPKEHGHGQGAGHAHAHSGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAARSPSHYADQEALDKHEHRLIKREAIEEERDADDEDDHDQVEDLSLARKERPESPYSPPPPRAASPMESASVIMHSNSASVSANGKEAHEHELQPEQEQEQDQEHELEDYSEAASPASQPLSMGVALKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00550970;
- 90% Identity
- iTF_00550970;
- 80% Identity
- iTF_00550970;