Dmon008761.1
Basic Information
- Insect
- Drosophila montana
- Gene Symbol
- bab1_1
- Assembly
- GCA_003086615.1
- Location
- LUVX01052126.1:100214-103691[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-11 5.7e-08 32.4 0.0 14 43 40 69 38 71 0.92 2 2 2.8 7.3e+03 -3.2 0.9 9 23 171 188 163 190 0.52
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCCTGGATGGGCGCCACAGGCTCCACGCTAGCAGACAGCTATCAATATCAGCTGCAGTCGATCGCGGCCCGCTCAAATCATGGCGGCCNNNNNNNNNNNGAGGGCCTCTCGCTGTCGCAGGCGGCGCGCAAATATGATATACCCTATCCGACGTTTGTGCTGTATGCGAATCGGGTGCACAATATGCTGGGGCCCTCGATCGATGGCGGGCCCGATTTGCGGCCGAAGGGGCGCGGGCGGCCGCAGCGCATACTGTTGGGCATCTGGCCGGATGAGCACATCAAGGGCGTCATCAAGACGGTCGTATTTCGCGATACCAAGGACATGAAGGACGACAGCTTGGGCGCGCATATGCCGCCCTACGGCCGCCATTCGCCCGTCCTCGGCGCTCTGGCCTGCCCGAATGGCATGGGCTCAGGTGGAGGAGGCGCTGCCGTTGGGGCAGGCGGCGGTGGAGCGGATCAGCAAATGTCCCAGGAGCAAATGTCGGCGGTGGCCGCCGTTGCGCACAATATACGTCAGCAGATGCAAATGGCCGCCGCAGCGCAGCATCAGCACGGGGAGGCggggccgccgccgccgccggggGCTCTGTTCAATTTGCCGCCGCATCTGGCGGGTGGCGGGCCGGGCAGGGCCAGCATATCGCCGGCATTGAGCAGCGGCTCAAATCCCTCAATGGGACAACGGCATGCGCCCTCGCCCTGCGGTCCCGCCGGCCTCATGCCGAATCTGCCGCCCAGCATGGCCcagcagcagcaatcgcacCCCAAGTCAAAGAGCAGTCCGCTGCGCAGCGAGACGCCGCGCCTGCACTCGCCCCTCGCCGAGCTGGGCCTGGAGCTGGGCTACAAGCGCGAGTTCTCGCCCACGCGCCTCTTTGCCGAGGATCTGGCCGAGCTGGTCGGCgccacctcctcctccgccgCCTCGGCAAGCAGCGCAGCGACGCCCTCAACTGGCCAACCCACAGCCGGAGTAGGAGAAGCGCCCAACACGGACAtctgctccagcagcagcggcggcatcaAGGTGGAGCCCATCACGACCAGCAGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSTLADSYQYQLQSIAARSNHGGXXXXEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDMKDDSLGAHMPPYGRHSPVLGALACPNGMGSGGGGAAVGAGGGGADQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPPPPGALFNLPPHLAGGGPGRASISPALSSGSNPSMGQRHAPSPCGPAGLMPNLPPSMAQQQQSHPKSKSSPLRSETPRLHSPLAELGLELGYKREFSPTRLFAEDLAELVGATSSSAASASSAATPSTGQPTAGVGEAPNTDICSSSSGGIKVEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -