Basic Information

Gene Symbol
onecut_1
Assembly
GCA_003086615.1
Location
LUVX01016280.1:777-5627[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-37 9.8e-34 115.3 0.4 2 78 753 829 752 830 0.97

Sequence Information

Coding Sequence
ATGGAATCGATGAATGAACTAATTGATTCGCAAGCGTTCAGCCAGCAGCTGATTGTGGAAACAAGTGAATTTATTGGAGTTGAACCAGCACaccagacgcagacgcagacacaGGAGGGCGAGTCCGAGTGCGGTGGGGGGTCTGGTGATGCAGTGACAGGAATGAAGTACGTCAAGCCACGTTCAGATCCGCATTCGCCGGCGGCTCTAAGCAGCCAGGCCATGCAGACCCTGATCGCAACACACACGGACAGCAGCCGGTTGCATGATGATGAGGATTCCACGTCTGTGGTTATGGTCATCGACGAAATGGGTCACAACAATTTGCAGGCGACCTATCAAATTGTGCCTCAACAGCTTCAACTGCACGGTGGCCGGAGTCTGCCAATGTCCCTGCTTCCGATGCACCAGGAGCGTCATAGTCCAGTCGATTTCGGGGGTTCAGACATAAGCCTTGATGGCTTGAGCGTAAGTACAACATCCCAGATAATTGCAGTCAAACAGGAGCACAAGCTGGTCATTGTACGGGAAAACGCCGATGTCAATGGGATTAATCGCCGCGCCAGCCCTCATATCGACATTAACATGTCAAATATCAATGTGAGCGTCATCGATGAGCTCTCCTctgatggcggcggcggcgtcggcggcggcatgGAGGAGGTCACTCTAAACCAACATCACCAACAGCTTTTGGATGACCAGCACCACCATCACCAGCACCATCAGCACCATCATGGACATGGGCATCATCGAGAGGCGCTGTCCGTTATTGTGCAGGCACAGGAGGACATTGACGAGGACATTGATGAGgacgaggatgatgatgaccGCGATTCGGGGGGGCAGTTGCTTAGCCCTGCTTTGGCCGTTGACAATGCACTGGAGCATAGCACGTACCAAACATTGACATCGGTCAATAATCGCATATCAGAGCCGGGCTTCAGCCCAACGTCATATGCAACGCTGACACCTATCCAGCCGCTTCCGCCCATATCCACGATGTCCGATAAGTTCGCCTATGTGGGTCACATTTCCGGCAGCGCCAGTTCGTCGGGCAGCgccaatggcagcaacaattcgACTGGCAGGATCAGCAACAACTGTGGCACTGGCGGCACCTCGGATGGCTCATTCACCAGTTTACCTATGCCCATTGAGGGCGCACACCAGGGCTCCTTGGGTAACCTGAGCTTGAGCGGATTGGGCGGAGTTCAGTCGCCGTATTCCTCCTATGATAAATTGCCTTCGCTGATTTCACCTCCGCCTCACAATTTTGCCAGCTCTCCATCGCACGGACTGTCCGGAATGGTTGGCTCATGCGATCTGCACACTCACAGCTCCTCGGTGCCATCGCCGGTGTCTGGCTCGGTGCCAGGTGGTGGTTGTGATACGCTCTCGCCTCACTCCGAGTTGCACTCGCATTCGCACTCACATTCTCCTCAACTTCAGGGTAATGTTGGTTTGAATGTGCATAAAGCCGGCCAGCAAGGACAAGGACatggacacggacacggacatgATCATAATCAAGGTAGTCAGGCTATGCAACTGGCACCGGTAGCTCTTCAGAAACAGATAATATGCCTTTCGCCAACAAGTGGCATTTCCGACGGGGTCGTTGTCAGCGATTATGAATCATCCTACCGcacacatcatcatcatcatcatcatcatcatgagcATGAACTTCTAATGGCCACGTCCTCCACATCGAACAATTCGACTGGCGGTCGCAGCTCTCAGCTAAGGTTGCAGCATAGCCCAACGCTTAGTCCGCACTCGGTATCTGCCGGTTCCGTGGTCTCCATGTCATTGCACTCGCCGGCATCGGTTGTTACGCTGCCGCACATGAACGGATCCGTTGCAAATCTTACGGTTGACTTGCCCGTCGTTGTCTCGCTTTCGCCGACACCGCCGCCCGGCGATGGCTCGATTGCTGTTAATATCGATGAAATTGTCCAGCGACAGagtcaaaagcaacaacaccagcaacaacaacagcacagtCATCACGACGGCAATGAATGCAATCCAAACGGCGACCATAACCTAACCAATATAACTAGTAGCAATAACTTGGAAGTGTGCAATATAAGTCAACAACAGAACGGATTCGTCGGCGAGCAACAAACCCAGCCCAAGCTGGCAACGCATTCCCCGAAATTAACTGGAGTCGCATCGGCGGCAACAATGTCCAGCAACGTCTCCTCGACAGCTGCGGTCAACAACAATCGTTCAAACGGTCCCAATGACATGGAGGAGATCAATACCAAGGAGCTGGCTCAACGCATCTCCGCCGAGTTGAAGCGTTACAGCATACCGCAGGCGATTTTTGCACAGCGTGTCCTTTGCCGATCGCAGGGTACGCTGTCGGATCTATTGCGCAACCCGAAGCCATGGTCCAAGCTTAAATCGGGACGCGAGACCTTCCGCCGCATGTTCAAATGGCTCCAAGAGCCAGAGTTCCAGCGCATGTCCGCCTTGCGCATGGCAGCCGCACAGATACCCCAGCGACCAGCAACTGGCGTTGGTTCTGGTTCCGTTTCTGGTTCCGGTTCTGGTGTGGGTAGCATGGGAAATGTTGTGTTTTCATCGGGATCAGCATCGACGGCCCCCGCCGTCGTGTTGACCAACACAACTTCGGACGCATCGCATGGCTCAACCATTTCGGGAAATTCCATGTTAAGCGGATCTGCCGGTTCTGGTGTTGGCGTCGGGTCCAATTGCCGTCGCAAGGAGGAGCCGCATATAGAACAAATGCCGCAGCCAAAAAAGCCGCGTCTAGTGTTTACGGATCTACAGCGGCGGACACTACAAGCAATTTTTAAGGAAACAAAGAGGCCTTCAAAGGAGATGCAAGTGACAATTGCACGCCAGCTGGGGCTGGAGCCGACCACGGTGGGCAACTTCTTTATGAACGCTCGTCGACGCTCCATGGATAAGTGGCGCGATGACGACACCAAGAATGCACAGCATCCGCATGGTCGGTCACATGCGCATCAGACGGAGGAGACGGAGgaggagagggagagcaaCAGTGGAACGCATGGGCATTACGGAAGTCTGCATACGACAGCGATGTCGCCATTGGGGAACTTCGACGATGAGGGCGAAATGGACTTGGACCTGGAGCATCATGATTTCCTGGTGGACGATCACGACGATAACGATGAGCACGACGACATGTTGTGA
Protein Sequence
MESMNELIDSQAFSQQLIVETSEFIGVEPAHQTQTQTQEGESECGGGSGDAVTGMKYVKPRSDPHSPAALSSQAMQTLIATHTDSSRLHDDEDSTSVVMVIDEMGHNNLQATYQIVPQQLQLHGGRSLPMSLLPMHQERHSPVDFGGSDISLDGLSVSTTSQIIAVKQEHKLVIVRENADVNGINRRASPHIDINMSNINVSVIDELSSDGGGGVGGGMEEVTLNQHHQQLLDDQHHHHQHHQHHHGHGHHREALSVIVQAQEDIDEDIDEDEDDDDRDSGGQLLSPALAVDNALEHSTYQTLTSVNNRISEPGFSPTSYATLTPIQPLPPISTMSDKFAYVGHISGSASSSGSANGSNNSTGRISNNCGTGGTSDGSFTSLPMPIEGAHQGSLGNLSLSGLGGVQSPYSSYDKLPSLISPPPHNFASSPSHGLSGMVGSCDLHTHSSSVPSPVSGSVPGGGCDTLSPHSELHSHSHSHSPQLQGNVGLNVHKAGQQGQGHGHGHGHDHNQGSQAMQLAPVALQKQIICLSPTSGISDGVVVSDYESSYRTHHHHHHHHHEHELLMATSSTSNNSTGGRSSQLRLQHSPTLSPHSVSAGSVVSMSLHSPASVVTLPHMNGSVANLTVDLPVVVSLSPTPPPGDGSIAVNIDEIVQRQSQKQQHQQQQQHSHHDGNECNPNGDHNLTNITSSNNLEVCNISQQQNGFVGEQQTQPKLATHSPKLTGVASAATMSSNVSSTAAVNNNRSNGPNDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQIPQRPATGVGSGSVSGSGSGVGSMGNVVFSSGSASTAPAVVLTNTTSDASHGSTISGNSMLSGSAGSGVGVGSNCRRKEEPHIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDTKNAQHPHGRSHAHQTEETEEERESNSGTHGHYGSLHTTAMSPLGNFDDEGEMDLDLEHHDFLVDDHDDNDEHDDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00526367;
90% Identity
iTF_00550799;
80% Identity
iTF_00550799;