Basic Information

Gene Symbol
Arid2
Assembly
GCA_003086615.1
Location
LUVX01010368.1:1-3602[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.1e-25 2.5e-21 75.9 0.0 2 89 94 180 93 180 0.93

Sequence Information

Coding Sequence
ATGACGTCCATTGATAATGTACGTGTGCTGCTGCAGTCTCTGCCAGCAGCATCGCCTGCCgtcggcaacagcaacaacaatccaCAGCAAAATGAGTCGACGCCGGCTAAACTTGGCGCTGCTGCAACACCATTGCGCGCGAGAAatacacagcagcaacaacaacaNNNNNNNcagcaacagcagcagcagcagttacaAGCACAACCccaatttttttatggcacGCCGGAAAAATCAACAACTGGGGTCAATGTTGGTGGCAAGCAGCTCAGGGCGCCGGAGGAATTCTGGCGTGATCTGCACCAGTTTCATGAGCGGCACGGCACTCCGCTGACGCAGGCAGCCAAGATAAGTGGTCAGCATGTAGACTTATACCGGCTGTACCAGGAGGTCACGGAGCGCGGTGGCTTCAACAAAGTGAACATGCGCGATGAATGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAATGGCACCGCTGGCATTAAGCATATCTATCGTCGCTACCTGGACAAATACGAGCGCCTGAACTTCTTGGGTGAGGATCCCGACAAGCTGGAGGCCTTGGAGGCGGTCATCGAGTGTGCTGATTTGGGTGCCAGCGCCAGTCGCGCTCGTTCACGTGCCTTGGGTGGTGGCGGCGTCGGGGGTGTAGGTGGCAGCTTAACTGGCGGCAGCTGGGGCAGCATTTTTGGCATGCCGCACTCCACGCTGACGGCCGTGCCCATGGCGTATAACCAGCGCCAGCATATGGTGAATGCGGATCGCCGACGTCAGTATAAAATGTCCACACAGCTGCACAAGCACAGCAGCTATGAGaagctgctgttgtcgcttaTCTCACCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACGCTGATGGCCAATGAGCAGCGTCCAACGCTGCAGCTGAACGAGTGCCCCAAGCTGTTGGATGTGCTGCTGGCGCATTTGGGCGTCTATGCGGATTACAGCATGCGTCAGCTGTTCCAGCATGGCCACAACAATGCCGGCATGCAGGTGCGACGTCACTCGAAACTTAATTTCTGGCGGGATTTGCTCTACGATAAGCCACAAATTCTGGACCTCTACACGGACGAACAAGCCTGGCTGGACAATGGACTGATCAACAAGGAGAGCGACGCGTGCAATGATTATCTGTTTCAATCGGATGACCTCGATTTCGAGCTagactttttaaatttacgtCGCAGTCATGGCACGGACGAGCGCATTGGCCAGCGTGTGCTGCAAATTGTGCAGCTATTGCGCAGCTTGAGTTTTCATCAGGATAACGTTACGCTGCTCGCCTCGAATCGTACGCTCTGGCGGTATCTGGTCATGGGGGCCAATGTTCGTTGGAGCAACATTCACATTCAGGCACTGGAAACGGCTGGCAATCTAGCGCAGCAGTTTGACCTGCTGGATCCCGCCACGGACGAGCTATCGCGCAATCTGCTGGCCACGCTGTGCGAGGGCGTCGAATCGAATGATCGCGCTGTGATCATCAGCTGCCTAGAGATACTCTACAAACTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGTTGTCTTGGCTTGGATTTCTACCAGCGTGTGATGCTCTTTCTCTCGCTGACCGATGTGATGCTTTTAATCTTCACGCTGGAGACAATCTATGCGTTGAGCTCTTTGGGCGCACGTCCCTGCTCGATGTTGATGCAGGTGCGCGGTCTGCTGGATCAGCTGGTGGCCTTGCTAACCGTCGAGGCGCAATCATATGGCGCGGCTGGCTGCATTTTGATGCGCGTCGTGGAGGTGGTGCCGGGCAATATGTTGTCCACACTGGCACAGACCATACCGGGCACTCAAATGACACAACTGATGACGGtcaagcagccgcagcagccagcGCCGATTGCTGCACTGCCGCCGCCAGCACCCACACATGTCCAAGTGTTACCGCCACAGCCAGACACCGTTTCGGTGCCTGTGCCTGCGCCTGCTCCCGCGACTACGCCCGCCCCTGTGTCCCTGCCTGTGCCTAGTTTGCCGCAGGTGCAGCTGCCTATGCCCAGTTTGCCGCAGGTGCAGCTACCGCCACCGCCAACCCAACAAGTATCGATGCCTGCTCCAGCAGCCGCCACAGTTGTGCTGCCTGGAACGCTGCCCGCACCGCCCTCCGCGCCGCAAAGTTTCACCCATGATGATGAGACCTATGCGCTGGCCTGGCTGCGTGCCACCTACGAGCGCGCCGGCAATGGTCATGAGTATCGCGTAGAGCAACAGGAGCTGTACACCATTTACCTATCGCACTGCCAGAAGGCGGGCAAACTTTCGGTGGTCAATCGGCTGCAATTTCCCCGTCTCGTGCGGCTCATATTCAATGCGAGCGTGGGTCCAGCCATTGTGCGCCAGATGGACGGCACCGATCTGCCCGGCACGCACTATGTGGGCATAAGGATGCGTGCTCAGCCTTTGcccatgcagcagcagcagcagcaacaacaacaacagcagaaggcagcagcaacggcgacagcaacagctgccaaaaagGAGCCAGCGCTGGCGCCCAAATCAGAGACAACAGCTGTAGACGCATCTGATGAAGCAACAGGTACTCAAACGCCCAGCTCCTCGCTGATTAAGAGCCTGCTGGCAAATAAAGTTAACGAGCGGCAGCTGAAACAAAAGGCACAGGCCCAACCGCCTGCGCTGGTGGCCACCACATCCTCAGCCACGGGCTCCCCAGCCAACCAACCCATTAAGGTGACCTCCACGGCAATTAGCGCCTTTGTCAACAATCCGCTGATGCAGCACACGCCCGTAAAGGTGGGTCAGACCACCATAAAGCCGTTGCATCcgcagctggcgctggagaAGAAGCCAATGACGGACTCAGCGCCACCACCACTTGCTCCATTAAGCGGCTCCAATGTGCTTACGAAGGATGCGCAAGGACGCACCGTAATTATACAATCCAAACGCAAGCTGACCATCGATGAGGAGCAAAACAAGCGATTGGCATtggatagcagcagcaacacgccCGCTGGCAAGGATGAGCCCCAGGTGACGCCCTCTAAGAATGCGGCCAATCTCTATGCAGATTTGGCTGCCTCGATACTAGAAGATGAGGATTTGGATGATGTGCCGCCGCTGGCAGCGTCCAgtcaagagcaacagcagaccACTctgcagcatcaacaacaacaacagc
Protein Sequence
MTSIDNVRVLLQSLPAASPAVGNSNNNPQQNESTPAKLGAAATPLRARNTQQQQQXXXQQQQQQQLQAQPQFFYGTPEKSTTGVNVGGKQLRAPEEFWRDLHQFHERHGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAVIECADLGASASRARSRALGGGGVGGVGGSLTGGSWGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEQRPTLQLNECPKLLDVLLAHLGVYADYSMRQLFQHGHNNAGMQVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLINKESDACNDYLFQSDDLDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQDNVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFDLLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLFLSLTDVMLLIFTLETIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTLAQTIPGTQMTQLMTVKQPQQPAPIAALPPPAPTHVQVLPPQPDTVSVPVPAPAPATTPAPVSLPVPSLPQVQLPMPSLPQVQLPPPPTQQVSMPAPAAATVVLPGTLPAPPSAPQSFTHDDETYALAWLRATYERAGNGHEYRVEQQELYTIYLSHCQKAGKLSVVNRLQFPRLVRLIFNASVGPAIVRQMDGTDLPGTHYVGIRMRAQPLPMQQQQQQQQQQQKAAATATATAAKKEPALAPKSETTAVDASDEATGTQTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTSSATGSPANQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLALEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDEEQNKRLALDSSSNTPAGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQQTTLQHQQQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00553539;
90% Identity
-
80% Identity
-