Basic Information

Gene Symbol
grh_1
Assembly
GCA_003086615.1
Location
LUVX01003555.1:34556-54365[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-26 5.3e-22 78.2 0.2 24 115 87 177 72 180 0.91
2 2 6e-28 5.6e-24 84.7 0.2 156 221 179 243 177 245 0.94

Sequence Information

Coding Sequence
ATGGTTAAACTGTTCTTCGAAACGAGGGAAGGGGGGTCCTTCGACTATACGGAACTGTGTCAGCCGGGCACCCTGATCGATGCGAATGGCAGTATACCCGTTTCGGTGAACAGCATACAGCAGCGCACCGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTAGATACCAGCACAAATGGCTCGACTCGCTCGCGGCCCTGGCACGATTTCGGGCGCCAAAATGATGctgacaaaatacaaataccaaaaatctTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCGATCAGCTCGTCGCAGCGGCGCGAAGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGCTGATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGTTCAGTGTCTCAGCACGGACTTTAGCAGTCAAAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACGTTCGAGGATCCGCGGGACGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAGACGCGCGATGAGGAGCGCCGCGCGGCCAAGCGCAAAATGACAGCCACCGGACGCAAGAAGCTGGACGAGCTCTATCATCCAGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCCGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAGTTGAAGGGCGCCTCGCCTTTCTTGCTGCACGGCCAGAAggtggccacgcccacgctcaAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATCCTGGATCAGAGCATGCTAACCAGCACGCCGATGTCCGACTTTGGGCCGCCAATGAAGCGTGGCCGGATGACGCCGCCGACCACGGAGCGCGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTATACGCCGCTGCACGTGGTGCCGCCGACCACAATTGGCCTGCTGAATGCGGATTACGGCGAAAATTGA
Protein Sequence
MVKLFFETREGGSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNADYGEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-