Basic Information

Gene Symbol
Ubp1
Assembly
GCA_003086615.1
Location
LUVX01008990.1:86932-106321[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3 1.2e+04 -4.7 1.9 89 89 70 70 25 117 0.53
2 3 6.5e-53 6e-49 166.4 0.2 22 189 397 561 377 572 0.90
3 3 2.8e-13 2.5e-09 36.8 1.0 188 222 634 668 628 669 0.92

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCTGTAAATTCCGGCCTCTTGGATATACAAAGCATATTTGATCCACaatatttacaacaacaacaacNNNNTCATTTACCaacacaagagcaacaacaacaacaacaacaagagcaacaaactTCACGCACATCAACGAAATTTGATCTGAACATTTTCAACGATTTCGACCAAATGGaattcaataacaacaatttgaatcGAAACCATAATCAGTATCcgaataatagtaataataataataacagtaaTAATTGTAGcatcaataacaataacaacaaccacaataccaacaacaacaacaacgttaaTACGCATCAGACTAACGGTGAAAATCTTAACCAGATCCAAAATAGTCATTTTATTAGCGGCTATCATCATCAGCACATTGGATCGGATTATGAGCCAGTGATTAACTTTGTTGATTCACCGCCGAATTCTGAGGAGTCTTGGACAGACGCACAGTCCAAGGATTCACCAGGACCCCAAATTATCGACGTGAGGACAATTTACTCAGACAGCGGCTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATCGGTCAAAGTGAAAATTCACCGACAACACAATCCGGCGACATACCCAATAAGGTGGCACATCAGGAGAAGGATAAGCACAAACGCGAAAAGCATTCAGGTCGCAACAGCTGGAGCGACGATATAGGTTTTGATCTGAACGCCGAGTTCAATAGCAACTCATATTTGAACAAtgaaaactttttatcgTTCTCCCCGAGCCTGACGGCGCTCAAGCAAGAGCCGCAAACGGAGCAGCTCAAACCGAATACAAAGATATCCTtggacagcggcagcagcaacaacaacagcagctccggCATTGGCAAGAGCGATAAATCTCCATTGGGCGAGGCCAATCATTCACCAGAGTCAGGAGTTGGCGCAGCTGGTGGCAGTGGCAAGCATGAGTTGAACGCCGGCATCATTTGCGGCTGTGGCACGCCGCAAGGCTCGCCCGCCGCAACGGATTTTGAATTGAATGGCAATGCCAATGTGAATGAAGCAACAGCTGAGAAAGGCCGAGCCGCATCGGGCAATGAGGCCTATACACAGGCGCCGCGCTCtggactgcagcagcagctgagcgtTGTCGAGGCAGCCAAAATTGAGCCCAGCTCATCCGGTGGTGCATCCCATGGAGAGGATCATAAATTTCAGTACATTTTGGCAGCGGCCACCTCCATTGCGACGAAGAACAATGAGGAGACTTTGACTTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattggTGACCTATCTTTCTATAGGGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCACGAGCGTCGTCTGCAGTTTATGGAACGCGAACAGATGCAGCAATGGCAGGCATCGCGTCCTGGGGATCGCATTATTGAGGTGGACGTACCATTGTCGTATGGCCTGTGCCACGTGTCGCAGCCGTTGAGCTCGAATGCCTTGAATACGGTGGAAATATTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAggtcaattgcatttcaacCGAGTTTACACCAAAGAAGCACGGTGGAGAAAAGGGTGTACCGTTTCGACTACAAATTGAAACCTATATAGaaaatacaacagcaacaacaaNNNNNNNaacagcagcaacaacaacaaattgcggcaacagcagctcgagcagcagcagcaacagtagcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaacaacaacaacaacaacccatCTGCCGGCACTTCGCCTTGCCCCACGGACAATCGGAATGTGAGCAGCGGCTCGATTGCCGGCCTGGCCGCACTCAATGGCAAACAGGCGGTGCACGCAGCTGCCTGCCAGATTAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCACAAACAGGATCGCGAAAAGATACAAAAGCGTCCGCAATCGGAGCAGGAAAAGTTCCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGATACCGCCAGCGACCACAACTGGCTGCTACAGTCCCGAGTATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGAATGCTGCCATTCGCCAGCAGCGCATCACCGGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCGACCAATTCGCCAACATTGAAACTAATGGACGCCACAAATATGGTATCGCCGCAGCATGTGCCAGCCGATATTGACGATTATAATCAGAACATAATGCCAGAATCAACGCCCGCACAAGTGACACAGTGGCTGACAAATCATCGTCTGACAGCCTACCTCACCACATTTGCCCATTTCTCGGGCGCGGATATTATGCGCATGTCCAAGGAAGATCTAATACAAATCTGTGGACTTGCCGATGGCATACGCATGTTCAATATATTGCGCGCCAAGACCATTGCGCCACGTCTGACGCTCTATGCCAGCATGGATGGCTGCAGCTACAACGCCATCTACTTACTGTGCAACACggccaaggagctgcagcagaagaTCTACAAGCTGCCCGGTTTCTATGAGTTCATGGCCAAGGGCGGCCAANNGGTGTGCCAgccgcagcggctgctgcagcagcgctcTACAACAATTGGGGCATGCACTCAAAATACTCGGGCAGTGGCTCCAATATATTCAACGAGGCGAACAAGAGTTGCGTATATATATCGGGTCCATCCGGCATACATGTCAGCGTCAGCGATGAGGTGCTCAACAATGAGGTCAAGGACGGCAGTCTCTATGCCCTGGACGTGCAGGGCGGCAAAGTTATAA
Protein Sequence
MALSFLSVNSGLLDIQSIFDPQYLQQQQXXHLPTQEQQQQQQQEQQTSRTSTKFDLNIFNDFDQMEFNNNNLNRNHNQYPNNSNNNNNSNNCSINNNNNNHNTNNNNNVNTHQTNGENLNQIQNSHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDAQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTTQSGDIPNKVAHQEKDKHKREKHSGRNSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNTKISLDSGSSNNNSSSGIGKSDKSPLGEANHSPESGVGAAGGSGKHELNAGIICGCGTPQGSPAATDFELNGNANVNEATAEKGRAASGNEAYTQAPRSGLQQQLSVVEAAKIEPSSSGGASHGEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSNALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTTATTXXXTAATTTNCGNSSSSSSSNSSXXXXXXXXXXXXXXXNNNNNNPSAGTSPCPTDNRNVSSGSIAGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLIPPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADIDDYNQNIMPESTPAQVTQWLTNHRLTAYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGCSYNAIYLLCNTAKELQQKIYKLPGFYEFMAKGGQXVCQPQRLLQQRSTTIGACTQNTRAVAPIYSTRRTRVAYIYRVHPAYMSASAMRCSTMRSRTAVSMPWTCRAAKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
-
80% Identity
-