Basic Information

Gene Symbol
GATA6
Assembly
GCA_035047585.1
Location
JAWNPJ010000122.1:70584-72944[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.33 8e+02 -0.1 0.0 16 24 167 174 163 175 0.89
2 3 1.2 3e+03 -2.0 1.7 1 6 448 453 448 470 0.89
3 3 3e-17 7.1e-14 51.2 6.9 1 34 499 531 499 533 0.97

Sequence Information

Coding Sequence
ATGGAAACGCAGAcaccgcagcagcagcagcaacagcagcagcagcagcagcagcaattgcAACAGCTTCAATTGCTGGACAAGATCAAGCTGGAGAACAGCAACGGTGCCGAGCAGCTAACAGCACAGTCATCCGGTTCCCTGGAGGagcaacaggagcagcagcaacctgCAACATCTGTCGGAGTGGTGGTCCAAGCAAGCCAGGCAGGAGTCAGCGAATCGGAGGAGCAGTACGTGGTGGTGCCACGCATCCAAAGACGGATTCTAACCACCGCAGGGACACTGGAAGTAAACGAATCCCGCGAAGGAGAGCTGACCAACGCGAGCAACGCCAGCTCTGGATCGGCTCCAGAGAGCCACATCGAGTACCAGCGCTCCTCGCACCACTCCCCGGGCGGAGCCACCCACTACGTCCAGATGGCGCCACGGAATTCCGAGGTGTCCGACCAGGGGCCTACTCCCGGTGGACCACCGCCGGGCACTTTATACGCCTATCCCTCGGGACAGATTCTGTGTAATGGCGAGGACGTGACGGCCATAAAAATCGAGACAATTGAGAAGGGCGAGGTGCCTGGCGAGTCGCAGCtccagcaacaccagcagcagcaacagcagtgtCCCACCCCCAATGGCGGCAGCTATGGTGATTCCATAGTGATGAGCAGCGAGGCGGAAGCACTGcagcatcaccaccaccagcaacagcagcagcagcagcagcaacaccagcaacaacaccaggcggcagcagcagcagcggcggcggcggcagccgTCCATATTGCAACAAGCTCCCATGGCGGAACCGTGCGATTCGTAACCGATGACGGACGCTTCGCCACCGCCGGGCCGGAGACCTCCAGTTCGAGCCTCTACTACGATGCGCCGGTGGTCGATGGCAGTGTCCATGCCAACGAGTCCAAGACGTACGCGGACCTGGGCAACGCCTACGCCCCCTTCCCGCCCAGCTCCAGtttcagcagcaacagctacGCGGCCACCTTGCCGCAGACGAACACCATCTACAGCGTGCCCACCACCGGCCAGTTCCTGGCCAAGTCCGAGTCGGGTCTGAATTCGCTGCGCCAGGCGGGTCCGGCAGCCTTCCAGACGATATCCTTCCCCGACGGCGGCAACACCATCGAGACCCTGTGGACATCGGCCGCCCCGCCCGAGTACCAGAATGTGTCCTTCACCAATTTTCATCCCCAGGTCATTGATGAGTACCCGTCCGGGAACATGACCACCACCCACTGGTCGCCCGCCGGCAGCATTGGCCAGTACGATCCCAGTCTGGTTGCGGGATCGGCCACTGGATCGCCGAACCACGAGCTGAAGTGCGAGAACTGCCACTCGCTGTACGTGCGGAAGGGCAGCGAATACTTCTGCCCCAGCTGCACGAACTTCATGCGGCTCCCTGCCCGGATACCCCAAAGGCAAGCCAAGCCGAAGCAGGCCGCCGCTCCCAATAATCGCCGGAACGGAGTTACCTGCGCCAACTGCCAGACCAACTCCACGACGCTCTGGAGACGCAACAACGAGGGCAATCCTGTGTGTAACGCCTGCGGACTGTACTTCAAGCTGCACAACATGAACCGACCCCTCTCCATGAAGAAGGAGGGCATCCAGAAGCGGAAACGCAAGCCCAAGAACAATGGAGGCGCCCCCATGCACCGTGCTCCACTGCCCAGCATGCCGCAAGGAGTCAACCTGATGACGAACAGTCCCCTGTATCCCTCCCAGGTGCCGGTGAGCATGCTGCAGAATAGCCAGCAGAATGCCAGTCCGGAGTTGCACGACATGTCGACGACGGGAACGGCGGGTGGGCAGCGTGTGGTGACCATTTCCTCGGCTCCGCCCACCTCCGATGGAACGCTGAACATGTCCGCCCGTCACCATGTGACCGGGGAGAGCCACTCGCCGTACAGCCAGCAGTCGACGCCGGCCCAGAGTCAGTCCCCCCATCTGCCCAGTCCAGTGACAATAAACCGCCAGATAAACCAGCCaGTTCCTGCCATTGAGAGCGGTCGCAGCTCCAACAGCGAGCTCACCCCCAGTGTAATCACGCGAACTGGTCTTCCCGAGCGGTCATCGAATAACTAA
Protein Sequence
METQTPQQQQQQQQQQQQQLQQLQLLDKIKLENSNGAEQLTAQSSGSLEEQQEQQQPATSVGVVVQASQAGVSESEEQYVVVPRIQRRILTTAGTLEVNESREGELTNASNASSGSAPESHIEYQRSSHHSPGGATHYVQMAPRNSEVSDQGPTPGGPPPGTLYAYPSGQILCNGEDVTAIKIETIEKGEVPGESQLQQHQQQQQQCPTPNGGSYGDSIVMSSEAEALQHHHHQQQQQQQQQHQQQHQAAAAAAAAAAAVHIATSSHGGTVRFVTDDGRFATAGPETSSSSLYYDAPVVDGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAATLPQTNTIYSVPTTGQFLAKSESGLNSLRQAGPAAFQTISFPDGGNTIETLWTSAAPPEYQNVSFTNFHPQVIDEYPSGNMTTTHWSPAGSIGQYDPSLVAGSATGSPNHELKCENCHSLYVRKGSEYFCPSCTNFMRLPARIPQRQAKPKQAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMPQGVNLMTNSPLYPSQVPVSMLQNSQQNASPELHDMSTTGTAGGQRVVTISSAPPTSDGTLNMSARHHVTGESHSPYSQQSTPAQSQSPHLPSPVTINRQINQPVPAIESGRSSNSELTPSVITRTGLPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00578942;
90% Identity
iTF_00481892;
80% Identity
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