Basic Information

Insect: Drosophila monieri
Gene Symbol: -
Assembly: GCA_035047585.1
Location: JAWNPJ010000001.1:2038124-2039939[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.16 12 6.6 0.4 2 23 356 378 355 378 0.94

2 7 0.00016 0.012 16.1 0.3 1 23 385 408 385 408 0.97

3 7 1.7e-05 0.0014 19.1 0.6 2 23 414 435 413 435 0.97

4 7 6.6e-05 0.0052 17.3 0.2 1 23 441 464 441 464 0.91

5 7 3.2e-06 0.00025 21.4 0.5 1 23 470 492 470 492 0.99

6 7 9.5e-06 0.00076 19.9 3.6 3 23 500 520 499 520 0.97

7 7 0.00012 0.0099 16.4 0.8 1 23 526 549 526 549 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.16	12	6.6	0.4	2	23	356	378	355	378	0.94
2	7	0.00016	0.012	16.1	0.3	1	23	385	408	385	408	0.97
3	7	1.7e-05	0.0014	19.1	0.6	2	23	414	435	413	435	0.97
4	7	6.6e-05	0.0052	17.3	0.2	1	23	441	464	441	464	0.91
5	7	3.2e-06	0.00025	21.4	0.5	1	23	470	492	470	492	0.99
6	7	9.5e-06	0.00076	19.9	3.6	3	23	500	520	499	520	0.97
7	7	0.00012	0.0099	16.4	0.8	1	23	526	549	526	549	0.97

Sequence Information

Coding Sequence: ATGGAGACTTGCGGCCTTATTTACGTTAGTAATGACTACGAAAAGTTCCTAATGCGATGCTCCTTCTGTCCCAAGGACGTGGAGATGGCACAGTGGCAGCAGTTTGTTCTCCACTTCAGGAACATGCACACCCCCCAGGAGAATGAGAAAGATGCCATCCATGAAGATCTGGCTTTGGCCGAGAAATCTGCTACCGAAGAAGATAATGAAACAAATCTTGCGGCGAAGGAGGAGCAGATTGATTTAGAGCTGGAAATCGAGACAGTTGAGTCTTTGCTTAGCGAGGCTGAGGAGTCTGGTGGGTCTGATCAAGAAGATGAACTGGAACCAGGCCAGGAGCAAGAATCCGGTGACCAACCTGCAGATGTAAATGTTCTAAGTACACCCATATACAAGttccaACCGTCGTTCTTTCGAAGAGACCCACGAACACCAAAGTTCATTGAGATCTACAAGACATATCCATGCCTCTGGAACCCGAGTCACAGGAAATACAAAGAGCCCATTGCTTGCCAGGAAGCCCTTAAACAGATGATCCTTGAACTGGAGTCAAAGGTAGCTGTCTTCCTTAACGAAAGAAGCCTTAGGGCTGCCATTAAGAAGATTCACCAACAATATAACACGCTCAGCAAGCGAGTGCTCTCTGGCAACCAGAAACCACATTCATTAGCCTTTACCAACTACACTCTATGCAACTTTCTTAAGGCCAGTAAGGAATATGAGTCATctaaaagaaaggaaaaaatcCAGctggatttctcaaagaagaACAAGCTGACCACCGAGTTGATAGAGCTGTATGCAAATTTTCCGCAACTCTACGATCCCATGCACAAGGAGTTCTCCAACATGCATTCCCGCAAGCAGGCTTATGAAAGTTTGGCCGTTGAAATTGCAATCCCCAATACAGATATTAACAGTGATGACATCTACCGTGCAATCCAGAATCTAAGACAATGGTATTACAAAAGCACCAAGCACGCCATAAATGCTGGAAAAGGTGCCGAGAAGTTTTATCAGGACGTGTGCCGTTTTATGCCCCCCAAAATGTTTAAGCAGCGTCTCGTCTGCGAGATCTGTCAGCAAGTGACCTACTCGGATCACGTCCTGCAATCGCACATCTTTAAAGCCCACAAAATCGGTGACCTGCCCTTCAAATGTACCCTGTGCGAGCGCAGTTTTATAGGACGCGTAGAACTAGCCAATCACACACAGAGAGTTCACATTGGCAAAACGCTTAAATGCGACCATTGTGAGCGGACATTTGCAGTGTTCGCCGATTTGGAGCTACACATTCGCACCCACACGGGGCATAAGCCTTATGTCTGTGAGCAATGTGGAAAAGCCTTTCGCCTTCGTTCCCAAATGAAGCTCCACGTTACCGCTATCCACACCAAGATTAGAGCCTTTAAGTGCGACATGTGCCCCAAGGACTTTGTGAAAAAGGTCGACCTAACTGATCACATCAAGAGTCACCTTAACATTCGCGATAAGATCTGCAACGACTGTGGCAAGGGTTTCACCAGCTGTCATTCCCTCATCCGTCATCGTCAGATTCACTCCGAGGTGAAGAAGTTTGTGTGCAAACTCTGCGAGGCAAGGTTTTCCCAGTTTGTTGGATTAAATTCACATATGAAGCGTACCCACAATATAGTCCGAAGCCATGGACAAAAAGGTACCACAATTGTTCCTGcagaaaactaa
Protein Sequence: METCGLIYVSNDYEKFLMRCSFCPKDVEMAQWQQFVLHFRNMHTPQENEKDAIHEDLALAEKSATEEDNETNLAAKEEQIDLELEIETVESLLSEAEESGGSDQEDELEPGQEQESGDQPADVNVLSTPIYKFQPSFFRRDPRTPKFIEIYKTYPCLWNPSHRKYKEPIACQEALKQMILELESKVAVFLNERSLRAAIKKIHQQYNTLSKRVLSGNQKPHSLAFTNYTLCNFLKASKEYESSKRKEKIQLDFSKKNKLTTELIELYANFPQLYDPMHKEFSNMHSRKQAYESLAVEIAIPNTDINSDDIYRAIQNLRQWYYKSTKHAINAGKGAEKFYQDVCRFMPPKMFKQRLVCEICQQVTYSDHVLQSHIFKAHKIGDLPFKCTLCERSFIGRVELANHTQRVHIGKTLKCDHCERTFAVFADLELHIRTHTGHKPYVCEQCGKAFRLRSQMKLHVTAIHTKIRAFKCDMCPKDFVKKVDLTDHIKSHLNIRDKICNDCGKGFTSCHSLIRHRQIHSEVKKFVCKLCEARFSQFVGLNSHMKRTHNIVRSHGQKGTTIVPAEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00481734;
90% Identity: iTF_00481734;
80% Identity: -