Basic Information

Gene Symbol
Deaf1
Assembly
GCA_035047585.1
Location
JAWNPJ010000106.1:2514193-2516772[+]

Transcription Factor Domain

TF Family
SAND
Domain
SAND domain
PFAM
PF01342
TF Group
Other Alpha-Helix Group
Description
The DNA binding activity of two proteins has been mapped to the SAND domain. The conserved KDWK motif is necessary for DNA binding, and it appears to be important for dimerisation [1]. This region is also found in the putative transcription factor RegA from the multicellular green alga Volvox cateri. This region of RegA is known as the VARL domain [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.26 2.5e+03 -1.7 0.0 7 35 99 127 93 130 0.78
2 2 3.3e-30 3.2e-26 90.9 0.4 2 76 211 285 210 285 0.97

Sequence Information

Coding Sequence
ATGGAACAGGTCGACTCCTCAACCGAGCTGCACCTGAATAGGAAAGATCTAGCCGCGCTGACCGACGACGTGCGCGACGTTGTGAAGGAAGAGGTGATACTAGAGAGTCCGGGCCATCACCACAATCACCATCAGTTGGACTCGAAGGTTCGCATGGTCACATCCTCCTCGAACGAcaacagcggcagcggcggcggcggcgGCGTTGTGTCTGTACCAGTCTCACTGCCCATCGGATCGATGATAACCGGCACCACCTTTAATGTGATCACGCCCGACCAGCTGCCCCACTTTAAGCCGATGCTGTGCGTCGATAACAATGGCTACCTGTCTGGCAGCACAGTCAGCATGGGCAACGACCTCAAGACGATCGTTATCCAGCAGCAGACGCAGCCCAGTGCCGGCGGTGGTGGGGCTGGTGGCGGCGGCAACGGCGGCGCCAATAGTGCAGGCACCAACACCACCGCCACCAATACCATCGGTCTCAATCACGATGGCTCCGGGAGCAACAACAGCCACGACAGCCTTGCCACACTGGAGCACACGCACACTGGGGCAGGCAATGGCGGGGCcggtggaggcggaggcggcaATACAGGCTCCACCGGCTGGCAAGAGAACTCGTCCACCCAGCACATGGAGGTCTTCCAGATCCGATGCAAAACCACCTCCGCCGAGCTCTACCGCAGCAAGCTAGGATCCGGCGGTCGTGGACGCTGCGTTAAGTACAAGGACAAGTGGCACACGCCCAGTGAATTCGAGCATATATGCGGCCGGGGCTCTAGCAAGGATTGGAAAAGATCTATTAAGTATGGAGGGAAATCGCTTCAATCCCTTATAGACGAGGGAACGCTCACGCCGCACGCGACCAACTGCAGCTGCACGGTCTGCTGTGACGACGAAGCAGGTGAGTCAGCATCCGGTCCAGTGCGTCTCTTCACGCCATACAAAAGACGGAAGCGAAATCAAACCGATCTCGATATGGAGCCAGGACCAAAACGCAAGAGGAATACCCatcacagcaacaacaacaatagcaacactaacaacaacaatacgaGCGGAAGCGGTGCCAACAACAGTGTCGACGTTTCTGCCGCCGTAGCAGCGGCAGCTGCCAATGTTGTGGACGAGAACAACATGTTCCTGGAGGAGAACATCACGTCAAAGGATGAACCGTGGGCGGAATTGAACGACAGCCTGGGCACCTCCACCGAACTGGTCGACCAGTCGCAGATGGGGAACACCTACGAGCGGGAAACGTACGTGGTGAACATTAACGACGGGTCCTCCATCGCCGTCCTGGACACTAGCCAGTCGTTGAAAAACATTGAGCACGTCTACTGCACAATGGTGAAGGCGACCAACGACTTCAAGCGCCTGCTGAACGACGTCAAGCAGACCTACGAGCGCCGCTTGGAGGTCCTGCAAAAGGAGCGCGACGCGGCGGTGAGTGCGATGCGCGTCCAAGTGCACGCCGATATCGATGACCCCAATATATCTGGCTCCCTGCATGGCAACGAGATCATATCCGCAAAGAAGtgcGCTAACTGTAATCGAGAAGCTCTGGCAGAATGCTCCCTGTGCCGGAAGACGCCGTATTGTTCAGAGTTCTGCCAGCGGAAGGATTGGAATGCTCATCAGGTGGAGTGCACAAGAAATCCACAAACGACAACGCAACAGGTTATGCTGTTGATCGATGATCAGTCCTAA
Protein Sequence
MEQVDSSTELHLNRKDLAALTDDVRDVVKEEVILESPGHHHNHHQLDSKVRMVTSSSNDNSGSGGGGGVVSVPVSLPIGSMITGTTFNVITPDQLPHFKPMLCVDNNGYLSGSTVSMGNDLKTIVIQQQTQPSAGGGGAGGGGNGGANSAGTNTTATNTIGLNHDGSGSNNSHDSLATLEHTHTGAGNGGAGGGGGGNTGSTGWQENSSTQHMEVFQIRCKTTSAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHICGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKRNQTDLDMEPGPKRKRNTHHSNNNNSNTNNNNTSGSGANNSVDVSAAVAAAAANVVDENNMFLEENITSKDEPWAELNDSLGTSTELVDQSQMGNTYERETYVVNINDGSSIAVLDTSQSLKNIEHVYCTMVKATNDFKRLLNDVKQTYERRLEVLQKERDAAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRKTPYCSEFCQRKDWNAHQVECTRNPQTTTQQVMLLIDDQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00604081;
90% Identity
iTF_00475916;
80% Identity
-