Basic Information

Insect: Drosophila mojavensis
Gene Symbol: -
Assembly: GCA_018153725.1
Location: JAECYD010000073.1:782925-788034[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.5 3.5e+02 2.0 0.0 3 23 187 208 186 208 0.91

2 9 7.7 6e+02 1.3 1.5 2 21 772 793 771 795 0.89

3 9 4.4 3.5e+02 2.0 2.6 3 20 807 825 805 829 0.91

4 9 1.3e-06 0.0001 22.5 2.8 1 23 865 887 865 887 0.98

5 9 0.00063 0.049 14.1 3.6 1 21 917 937 917 938 0.94

6 9 2.4e-07 1.9e-05 24.9 1.7 2 23 945 966 945 966 0.98

7 9 0.001 0.081 13.4 1.8 1 23 972 994 972 994 0.99

8 9 0.0079 0.62 10.7 0.5 1 23 1000 1023 1000 1023 0.97

9 9 0.92 72 4.2 4.5 1 23 1033 1055 1033 1056 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.5	3.5e+02	2.0	0.0	3	23	187	208	186	208	0.91
2	9	7.7	6e+02	1.3	1.5	2	21	772	793	771	795	0.89
3	9	4.4	3.5e+02	2.0	2.6	3	20	807	825	805	829	0.91
4	9	1.3e-06	0.0001	22.5	2.8	1	23	865	887	865	887	0.98
5	9	0.00063	0.049	14.1	3.6	1	21	917	937	917	938	0.94
6	9	2.4e-07	1.9e-05	24.9	1.7	2	23	945	966	945	966	0.98
7	9	0.001	0.081	13.4	1.8	1	23	972	994	972	994	0.99
8	9	0.0079	0.62	10.7	0.5	1	23	1000	1023	1000	1023	0.97
9	9	0.92	72	4.2	4.5	1	23	1033	1055	1033	1056	0.95

Sequence Information

Coding Sequence: ATGAACGCGGATGCGGATGTGGCTTTCACGAGCTTTTACAGCACCGTGGGAAGCCAGTTGCAGCATGCCGACCTGTCGCTGTCCACGCCCATACACTCGCTGGAGCCCGATAACTTCAGCGGCTTCTTTGACGACGAGTCCGCACTGCTAAGCATTCCATTACCCATAGCAACTGGAGCAGCTGCAGCGAGCAGCCACAAGAGCAGCTCCGCTGGCATTGTCGATTCGCCCTGCATTCCATTCGTACAAATCCATACGACCGACTTGCAGCAGCAGCCTCAGCCGAGTCGCAGCTATCGCAATGGCTTTCGCCGAAAGACAGCGGAGATTAAGTCTGAGGCCGAGCTGATCAAATCGGAGCTGGCCGAGGCGGCGGCCAAGGAGCGCACCAATGCCACGCCCACACCGCCAACAGCAAAGGCAATAGCCAGCGAGAGCTGCCAGTCGGATTTGCCGTTGAACAAATGTCCCAGTTGTCCGTTCCTGAGTCTCTGTCCGCTAAAGACGCAAACGCACATCAGCAGCTGCTTTGGCATAGATGCACAGCATCGACTGCTCTGCCCAGGCTGTGCGAATGTGTTCTATAGCATAGAAGTGCTAAACCTGCATCTTAGCGCTGACCATCAGCTGGAGCCGCAGGAGATAGCCGCCCTTGCCAAGGCGAATGACTCGTCAGCCAAAAAGCCCCCTCAGCCCATGTCGCAGCCCAAGAGTCGCATCTACATCAAGAATGTCAATTGCCTGCGTGAGCCACAGCTGCCCGACTTTCTGCCCCCAGATGACAATATACTGGATCTACTAGACGATGTGGAGGAAGCTAGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGATGATCAACAACAATCTGCTGGAGAAGCCGCGCCAGCCGAAGATCTACATAAGGAATGTGGACATATTGAAGGAGCCCATGCTGCTGCCAGGCATGGGCTTCGGCAATGCGACCGCCTCGACTGTCGCCAGTCCTGCGGAGGTCTTCAACGCGGAGACACTGCTGACACCAACGGGTGGGCCGCTGCCTGGCTTTGAGCCACTGACCAGCATGTGCCCTGATGCCTTCAGCTTTGACTCTGTACTGAGTGGTGCGAGCGGTGCGGGCCACAGCGCCAGCAGCGGCAGCAGCCACAATTTTAGCGCTCTGGATCTGGACTTCAGCGTGGACTTTGAGCAGAGCGTGCAATTGGCTACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACGTGGACATCCTGAAGGCGCCTCAGCGTGGCACGCTCCATCTGCGCACCGTGGACGAGCTGAATCTGATGAATCGCAACGAGGTGGAGCACTTGATTGTGCCGAACCGTGAGCCGCTGCCCCTGGAGCTGCCACTGAATGCACCGGCTGTGGCCTTGGAGCCTTCGCTTGTGGACTTGCCGCCGCCTCCTGCACCGCTGAGCTATGACGATGGCTACGATTTGGCCGAGGACCTGGAGTGCTGGCCCTGGATGGATGACGAAGTGGAAGAAGCGGACCCGCAACCCGCGCAGCTGCAACTGGAGCCGCCGCACAACGACCCTCTGGTCAAGGACTTCCCGCAGCTCTATGCGCCGCCAGCCGCCACTTCGGGGCCTGTGCCGCCCCTGGTGCCAGTCACCGGCTCGATTGACGGCGCCGCAAGTGCTGCAGACAGTCTGAGTGGACTGCCAGTGCCGCCGCTGGTGCCTCTGCCCAGCGAGAAGCCCGCTCGCATCTACGTGGCCAACAATTTGCTGCCCACCACTGCTGCCGGGACTGCCGCTGTGGAGCAGCCTCCAGTTGGCGGAACCTCTGTGCGCGGTCGGCCCTATGGCGCCAAACAGGGGGCGGGTCAGTCGAAGCGTCGATTGGGCCAGGGCGCAGCGGCTCAGCAGCAGGAGCCGAGTGGCAAGAAGTGCACCGTCGAGGGCTGCATGTTCCGCTTCAAGTCGCCGGCGACGCTCGAGTACCACGGGCGGTGCCACAATGGAGCCCTGGGCTCTGCCCAGCCCATGATCTGCCCGGAGTGCAAGTCGACGCAGTTCAGCAACTGGAACTGCTTGCACACGCATCTGTGGCGGACGCACGCCATCGACATGGAGCTCTACTGCTGCCAGCTGTGCAACTTCAAGACGCCGATCTACTCACGGCTAGTGAACACCCACGCGAAGATCCACTCCGAGGAGCGCAACTACAAGTGCGAGCAGTGCGGCAAGGGCTTCAAGAACACCAAGCAGCTGAAGAACCATCGGCGGCTGCATCGCACCCAGGGCTTGGGCATGGGTAAGCCCGCCAGCGAGGAGCAGCAGCAGAAGCAGTCGCAGCTGCAGCCAATCCTGCCCGTGCTGCATCGGTGCGAGGATTGCGGAGCTGCTTTCAAGCACCGGAAGACACTGCGCGAGCATCTGTGCAAGCAGCGCAACGAGCAGCCGCAGTGCCCCACCTGTCAGCGCGTGTTCAGCTCGAAGAGCAGCTTGAAGCTGCACATGCGCAGCCACCAGGCGGACAAGCGGTTCAAGTGCGACAAGTGCGACTACGAGGCGAACGACCACAACGCCTTTCGCCGTCACATGGCCACGCACCGGGAGCAGAAGCGCTATGCCTGTCCGCACTGCGACTTCCGTGCCATCCAGAGCACTGCCTATCGGATACACCTGCAAAAGGTGCACCCGGAGCTGGAGCTGTCCGCTATTATCCACAAGTGCAATGCGTGCAAGTTCTCGAGCATCAATCACGGCCTGCTGCTGGTCCACCAGGCCAAACATCATCCCGTCGAGCCATCAACTGCGCAGTCGAATTCCAAGATCAAAGTGAAAAGCAGCCTCTAG
Protein Sequence: MNADADVAFTSFYSTVGSQLQHADLSLSTPIHSLEPDNFSGFFDDESALLSIPLPIATGAAAASSHKSSSAGIVDSPCIPFVQIHTTDLQQQPQPSRSYRNGFRRKTAEIKSEAELIKSELAEAAAKERTNATPTPPTAKAIASESCQSDLPLNKCPSCPFLSLCPLKTQTHISSCFGIDAQHRLLCPGCANVFYSIEVLNLHLSADHQLEPQEIAALAKANDSSAKKPPQPMSQPKSRIYIKNVNCLREPQLPDFLPPDDNILDLLDDVEEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMINNNLLEKPRQPKIYIRNVDILKEPMLLPGMGFGNATASTVASPAEVFNAETLLTPTGGPLPGFEPLTSMCPDAFSFDSVLSGASGAGHSASSGSSHNFSALDLDFSVDFEQSVQLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDILKAPQRGTLHLRTVDELNLMNRNEVEHLIVPNREPLPLELPLNAPAVALEPSLVDLPPPPAPLSYDDGYDLAEDLECWPWMDDEVEEADPQPAQLQLEPPHNDPLVKDFPQLYAPPAATSGPVPPLVPVTGSIDGAASAADSLSGLPVPPLVPLPSEKPARIYVANNLLPTTAAGTAAVEQPPVGGTSVRGRPYGAKQGAGQSKRRLGQGAAAQQQEPSGKKCTVEGCMFRFKSPATLEYHGRCHNGALGSAQPMICPECKSTQFSNWNCLHTHLWRTHAIDMELYCCQLCNFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNTKQLKNHRRLHRTQGLGMGKPASEEQQQKQSQLQPILPVLHRCEDCGAAFKHRKTLREHLCKQRNEQPQCPTCQRVFSSKSSLKLHMRSHQADKRFKCDKCDYEANDHNAFRRHMATHREQKRYACPHCDFRAIQSTAYRIHLQKVHPELELSAIIHKCNACKFSSINHGLLLVHQAKHHPVEPSTAQSNSKIKVKSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00554675;
90% Identity: -
80% Identity: -