Basic Information

Insect: Drosophila mojavensis
Gene Symbol: -
Assembly: GCA_018153725.1
Location: JAECYD010000275.1:5031573-5035284[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.25 19 6.0 0.4 2 23 138 160 137 160 0.86

2 7 4e-06 0.00031 21.0 3.0 1 23 177 200 177 200 0.98

3 7 8.6e-06 0.00067 20.0 2.3 2 23 309 330 308 330 0.96

4 7 0.0037 0.29 11.7 5.8 1 23 336 358 336 358 0.98

5 7 9.6e-06 0.00075 19.8 1.7 1 23 364 386 364 386 0.96

6 7 1.6e-06 0.00013 22.3 3.0 1 23 392 414 392 414 0.99

7 7 0.0002 0.016 15.7 4.1 1 20 420 439 420 441 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.25	19	6.0	0.4	2	23	138	160	137	160	0.86
2	7	4e-06	0.00031	21.0	3.0	1	23	177	200	177	200	0.98
3	7	8.6e-06	0.00067	20.0	2.3	2	23	309	330	308	330	0.96
4	7	0.0037	0.29	11.7	5.8	1	23	336	358	336	358	0.98
5	7	9.6e-06	0.00075	19.8	1.7	1	23	364	386	364	386	0.96
6	7	1.6e-06	0.00013	22.3	3.0	1	23	392	414	392	414	0.99
7	7	0.0002	0.016	15.7	4.1	1	20	420	439	420	441	0.95

Sequence Information

Coding Sequence: ATGTGCTCCATGTCCGTGTTGTGTCCACTGTGCGCGGTGCCGAGTTTCAGTAGCATCGACGCGCTGCAGCAGCGCCTAATCAAGGCGGCCAATGGCCCTCTGGCCTGTCCCTTTCCCAACTGCAAGGAGCTCTTTCTGGGTCTGGACAAACTGACCATACATCTATTTAGTCACACGAGCCTGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAGCAGAGGCAGCCTCAGCTGTGCTTCCTCCCATTAATTGCCCTGCTGCAGCTAGTCCGCCTCCTGCTGCCGTTCCTAAGCGACGTGGCAAAAAGTCGCGTGCCAAGCCCATCGAGCTGCCGCCCCCGCAGCCCTCTACGCCTCCTTCCAGATGTGACATTTGCGAGTTTAATTTCCGCAACGAGGAGCTGCGAGACATTCACTTCCGGTTGGTGCATGAGAATGCGGAGATAACAGAGCCGACGCTGGGTCAGCAGCAGGAGCCCTACAAGTGTCATCTGTGCTCCAAAACCTTCCGAATGAAGGGTTCATTGCGTGTGCATCTCAAGGTGTTGCACACGGTCGGCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCCAAAATCAGCATTTGCGATCGCATTCGGCACAAGGAGGCGTCATCCACCAATGGCTGCAGCACCTCTAACGCGAACACCAACACCCAGCCGTATGCTCTGAGTGGCGCCATCTACATGCTCAAGCAGGAGCTACCCTCTGCAGGGGAGACAGCGCCCGGTTCGGAGTATGGCAGCACGCCCAAGAACTGGGAGTGCGACGTGTGCACCAAAATGTTCACCACCAAGTATTTCCTGAAGAAGCACAAGCGTCTGCACACGGGTGAGATGCCCTACACCTGCCAGTACTGCGCCAGAACCTTCACCTTCCAGCAATCCTATCACAAGCATTTACTCTACCACAGCGAGGTGAAGCCGCACGCCTGCGGCATCTGTGGGCGCGCCTTCAAGGAGCTGTCAACGCTGCACAACCATCAGCGCATCCACAGCGGAGAGAAGCCCTTCAAGTGCGAGGTCTGCGGTAAATGCTTTCGGCAACGTGTCTCCTTCCTGGTGCACACACGCATCCACACGGGAGTCATGCCCTACAAGTGCGAGCTGTGCAAGAAGACGTTTCGCTATAAGGTCTCGCTGCGAACACACAAATGTGAGCCGCAGACTCCGGAGCAGCTGATCAAGGCGCTGCTGGACTCCAATGTGAGTGCGGACAGTGTGCAGGCCGAGCACACAGCAAGCAATGCGGCCATTCATATGAATGGCACCATCGATCAGGAGGCGTTGCTCTCGCAAACGATTGATGACATTGTCGTGGAGAGCTGCCAGAAGCTGGGAATTTGCAGTGTGGAGCCGCCACAGCAACCACAGCCGGTTGTTATGGAGAGTGGCGTGCAGTTTGATGGCAGCGGCTCCCCGCTGCAGCAGCTGCAGAATTTGCGGCTCTACTCGCCGCAGCAAACAGAGCAGCCCAGCTCGGACGGTGAACTGTTCCGTAACTTCCTTATGGACGCCACGTAA
Protein Sequence: MCSMSVLCPLCAVPSFSSIDALQQRLIKAANGPLACPFPNCKELFLGLDKLTIHLFSHTSLMXXXXXXXXXXXXXXXXXXXXXXXXXIAEAASAVLPPINCPAAASPPPAAVPKRRGKKSRAKPIELPPPQPSTPPSRCDICEFNFRNEELRDIHFRLVHENAEITEPTLGQQQEPYKCHLCSKTFRMKGSLRVHLKVLHTVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKISICDRIRHKEASSTNGCSTSNANTNTQPYALSGAIYMLKQELPSAGETAPGSEYGSTPKNWECDVCTKMFTTKYFLKKHKRLHTGEMPYTCQYCARTFTFQQSYHKHLLYHSEVKPHACGICGRAFKELSTLHNHQRIHSGEKPFKCEVCGKCFRQRVSFLVHTRIHTGVMPYKCELCKKTFRYKVSLRTHKCEPQTPEQLIKALLDSNVSADSVQAEHTASNAAIHMNGTIDQEALLSQTIDDIVVESCQKLGICSVEPPQQPQPVVMESGVQFDGSGSPLQQLQNLRLYSPQQTEQPSSDGELFRNFLMDAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00516486;
90% Identity: -
80% Identity: -