Basic Information

Insect: Drosophila mojavensis
Gene Symbol: -
Assembly: GCA_018153725.1
Location: JAECYD010000080.1:2100479-2102890[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.3 1.8e+02 2.9 0.3 1 12 38 49 38 55 0.80

2 10 0.00088 0.068 13.7 2.8 2 23 223 244 222 244 0.97

3 10 0.00042 0.033 14.7 1.2 1 23 270 291 270 291 0.97

4 10 5.4e-05 0.0042 17.5 0.3 1 23 297 319 297 319 0.95

5 10 5.3e-05 0.0042 17.5 0.5 1 23 347 369 347 369 0.97

6 10 7.8e-08 6.1e-06 26.4 0.9 1 23 375 397 375 397 0.99

7 10 0.001 0.08 13.5 4.6 1 23 403 425 403 425 0.98

8 10 5.2e-06 0.00041 20.7 0.7 1 23 431 453 431 453 0.99

9 10 1.9e-05 0.0015 18.9 0.1 1 23 457 479 457 479 0.99

10 10 0.0057 0.45 11.1 0.0 3 23 503 524 501 524 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.3	1.8e+02	2.9	0.3	1	12	38	49	38	55	0.80
2	10	0.00088	0.068	13.7	2.8	2	23	223	244	222	244	0.97
3	10	0.00042	0.033	14.7	1.2	1	23	270	291	270	291	0.97
4	10	5.4e-05	0.0042	17.5	0.3	1	23	297	319	297	319	0.95
5	10	5.3e-05	0.0042	17.5	0.5	1	23	347	369	347	369	0.97
6	10	7.8e-08	6.1e-06	26.4	0.9	1	23	375	397	375	397	0.99
7	10	0.001	0.08	13.5	4.6	1	23	403	425	403	425	0.98
8	10	5.2e-06	0.00041	20.7	0.7	1	23	431	453	431	453	0.99
9	10	1.9e-05	0.0015	18.9	0.1	1	23	457	479	457	479	0.99
10	10	0.0057	0.45	11.1	0.0	3	23	503	524	501	524	0.95

Sequence Information

Coding Sequence: ATGTCAGGATCCAGTGAGATAAATTACGGAATAGCTTCGGACTTGCACGTGGACGAAAATAAAGAAAGCAATATTGACCACTTCGTAATTGATACGGGTGTGGATGAAATATATTATTGTGAGGACTGCAATAATGACTTCGACAGCATCGAGTCGTACAACCAGGCGCACAGTGGCCCTGATGGCTGTGGGGCCACGGTCGAGGCCAGATCCAAAGTCATGGTACATGCGGTTGAGATCAAAGAGGAGTTCGAAGACACCATGGTAGATATTGATTCCATGGTCGTTGAGGATGATCTGGTTGAAGAGCTTGATGAGGCGAGCGAACCACAGCTGTGGGAGGTGCTGGAGGATGACGAGCAAGTGGAAGCCAGAGTCGTCAATGAAGCTGAAATTGCATCCGAAGCTGAGCCAGAGGATGAAGAGGAGGCGGAGGCGGAAGCTGAGGAAGTGTCTAACAAATCGGAGCGCTACTTCTGCTTCGACTGTCACAGCATATTTGAGACTCGCCAGAGCGCGGAGGACCATAGTTGTCCCCAGGCTGAAGCAAGCGGCGAAGCACGCGGCAAGAGCAACAACGCCAAGCTAGCCAAGACACAGACGCCAATGCGCCGAAAGGTCGCAGCTGCCGCGGCTTCCAGCAGCAGCAACAACAGCAGCGTCACAGTGTGCGACATTTGCAATACGAAATTCAGCTCGGCAAAGTGTCTCAAGTTCCATATGCGCATTCACAACAAACGCGCTCCCAAGTCCATACAGGACGCTCTGCCCGTGGGCGCACATCAGCAATACAGCGAACTAGATCAGTTCTACTGTGAGATATGCAACAAGAGCTTCGAGCAGAACCTGTTGACGGTGCACAAGCAAATGCACCAGAGCCAGGAGCAGTTCTTGTGCGGCATTTGCAATCGCAAATTTGAAAATGCTACCAACTATGAGGTGCATTTGAAGATTCACGAACGTGCGCTGAACAGCAATAGCAATAGCAATGCCAATGCCAATAAAAAGCCTGCCAATGGAAAGAAGGATAAACCAGGATTTGCCTGTCAATACTGTGAACGTGTCTTCTCCCGGCCGTACGAAAAGGTGAAGCACGAGCGTGTCCATACCGGCGAGAAGCCCTACAGCTGCGAGGTGTGCGGCAAGACCTTTCGCGTCTCCTACTCGCTCACGCTGCATCTGCGCACACACACTAACATACGGCCCTATGTGTGCACCACTTGCAATAAGCGATTTAAATCGTATCAGGTCTATTCGCATCATTTGCGCATTCACAGCTCGGACCGCCTATACACCTGTGATAGCTGCCCGAAGGCCTTTCGCACCTCGGTGCAGCTCTATGCCCATAAGAATACGCACACGAAGCCGTATCAGTGCGCCGTCTGCAATCGGCCCTTTGCCTCGCTGTATGCCGTCAAGGCGCACATGTCCACCCACAGGACCAGCGACGCCAAGAGCGTCAGCAGTGCAGCCATCAAGAGCCAGCAGCTGTCGAACAAATATTGGTGCGTTACTTGCGGCGCCGAGTATGCGCGTCCCTTTGCCCTGCGTCTTCACATGAAAGCCGCCCATGGGCATCCGGATGATGCGGACACACGATTGGCCAAAGTGCCTGCTCCCGAAGATGAGGACGACGACGAGGACAACGATGAGGAGATTGCTGTGCCGGACACCGAGACGGCCGTCCTCATCGCAGCAGCCAAGGCCGATTCAGCCTATCTGGATGCAGCCGCCAATGATGTGGACGTAATGGGCGCTGTGCCCAAGTACGAAGAGTGCATTGAGGTATGCACGGATGCGTTTGACGTGGAGACATTTCACAGCGAGGAGATCATCACCGACTGGCTAAAGTGA
Protein Sequence: MSGSSEINYGIASDLHVDENKESNIDHFVIDTGVDEIYYCEDCNNDFDSIESYNQAHSGPDGCGATVEARSKVMVHAVEIKEEFEDTMVDIDSMVVEDDLVEELDEASEPQLWEVLEDDEQVEARVVNEAEIASEAEPEDEEEAEAEAEEVSNKSERYFCFDCHSIFETRQSAEDHSCPQAEASGEARGKSNNAKLAKTQTPMRRKVAAAAASSSSNNSSVTVCDICNTKFSSAKCLKFHMRIHNKRAPKSIQDALPVGAHQQYSELDQFYCEICNKSFEQNLLTVHKQMHQSQEQFLCGICNRKFENATNYEVHLKIHERALNSNSNSNANANKKPANGKKDKPGFACQYCERVFSRPYEKVKHERVHTGEKPYSCEVCGKTFRVSYSLTLHLRTHTNIRPYVCTTCNKRFKSYQVYSHHLRIHSSDRLYTCDSCPKAFRTSVQLYAHKNTHTKPYQCAVCNRPFASLYAVKAHMSTHRTSDAKSVSSAAIKSQQLSNKYWCVTCGAEYARPFALRLHMKAAHGHPDDADTRLAKVPAPEDEDDDEDNDEEIAVPDTETAVLIAAAKADSAYLDAAANDVDVMGAVPKYEECIEVCTDAFDVETFHSEEIITDWLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00493819;
90% Identity: iTF_00540529;
80% Identity: -