Dmoj003274.1
Basic Information
- Insect
- Drosophila mojavensis
- Gene Symbol
- -
- Assembly
- GCA_018153725.1
- Location
- JAECYD010000079.1:7337337-7344098[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-11 6.1e-08 32.3 0.0 1 40 617 657 617 660 0.90 2 4 3.9e-14 1e-10 41.2 0.1 2 39 672 709 671 712 0.94 3 4 9.2e-18 2.4e-14 52.8 0.0 1 45 726 771 726 771 0.98 4 4 9.3e-20 2.4e-16 59.2 0.0 1 43 778 821 778 822 0.97
Sequence Information
- Coding Sequence
- ATGAAGATTAAAGAATGGTGGATGAAGAATAAAACGAAGAAACGAAGAGAGCGAATGTCCGGTCTGTTGCGCACCGCGGAGCAATTGAAAATCAAAGGACTGTGCGAGCCGGCCGAGAATGCGGACGATTTGAATGACGCTGCATCGGCGATAATCACTGTATCGGAGAACATACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGATTGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGTGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGACACACGCGATCTATCAAATCCCACCGAACAGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCACCATCATGCCACCGGGGACGAGAGCAACTCGAATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATCCGAGCCAGATCAAGCACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTATGCGGCCCCGGCGCCGGTGGTGTTGGCGGTGGTGGTGGTGGTGGTGGTGGCGGCATTGGTGGTGGTGGTGTTAATGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCGTGGAACGAGGATGCCCTACAGAATGCCTTGGAGGCATTGCGTTCGGGTCAAATATCGGCTAATAAAGCATCCAAAGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATTCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCTGGCAATACGTCTGTACAGAAAGCAAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCTATGAATGAGGCATTGAACTCGGTGCGCGTCGGTCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAATACAAGTGGCATCTCGATTAACAACACGTCCGGCAATACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGGAGCAGAAGCAGGAGGAAAAGGAGATAGAGAAGAAGATGAATGTTGTTAACACTGTTAACGCTGCCACGCCCACCAACACAAATGCCACCGTCGCCGCCACCATTAAATTTCGCTTTAATGCGAAGCATTGGAAGCGCAAGTTGAAGCAGTTTCATTTGTTATTGTCGAAGCCAACTTAA
- Protein Sequence
- MKIKEWWMKNKTKKRRERMSGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDNKPQKICKTEQSVASPASNSSTSNNAVGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEQLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGGGIGGGGVNAGEKGQFNGPKAWTQDDMNSALDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISINNTSGNTTGSIEIIEHSQENSEQKQEEKEIEKKMNVVNTVNAATPTNTNATVAATIKFRFNAKHWKRKLKQFHLLLSKPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -