Basic Information

Gene Symbol
ct
Assembly
GCA_018153725.1
Location
JAECYD010000135.1:20638541-20656803[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.9e-27 4.5e-23 81.1 0.0 3 72 441 511 439 516 0.95
2 3 4.9e-32 4.4e-28 97.1 0.0 3 77 951 1026 949 1028 0.96
3 3 3e-31 2.7e-27 94.6 0.0 3 76 1222 1296 1220 1299 0.96

Sequence Information

Coding Sequence
ATGCGCCAAGGCTCGAATATTCATCAACTGCTGATTATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGCCCTGGAACAAACTCACCTGGTACAAATCCAGAGGCTCGAAGAGCACCTGGAGGTGAAGCGACAGCACATAATGCGCCTGGAGGCCCGCTTGGATAAGCAGCAGATAAACGAGGCGCTGGCCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAAGACAACTGATCTAACATCGACCCATCGACACAACGACGATGATGACGATGACGATGACAATGATCGTGATAATGAGCTGCGCGACGCCGATGGCGATGATGATGACGACCTGCATCTGACCAATAGCGAGCAACAGCAGCAGCAGCAACAGCCGCAACATTCAGCTTTGGTCAACAATCGCCACGACGATGAGCAGGACAAGGAGGATGCCGAGGAGCACGATGCAGAAATAGCGAATGCCACAGCCGCAGCGGACAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACCTGAATGTGCTCAGTCCACAGTCGGCGATTGCCACAGCCGCCGCGGCCGCAGCAGCCGCTGCCTGTGCCAACGATCCCAACAAATTCCAAGCCCTGCTACTGGAGCGGACCAAGGCCTTGGCCGCCGAGGCGCTCAAGAACGGCAGCACCGATGCCGTCAGCGATGGTGACATGGGGCATGGCCAACTGTTGCATACGGCACACCATTTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACCGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAACGGCAACAAGTCGCTGTTGCAGGCAGCGGCCGCTGCCAATGTGGCGGCTGCCGCCGTTGCCGTTGCCGAGGACAACAACAACAGTCTGACCCCCAATGCGAACGCGGCTGTGGCCGCAGCAGCAATGGCTGCCCATGCCCAGCATGCGGCTGCTTTGGGTGCGCCAGGCTTCCTGCCCAATCTGCCCAGCCTGCCATTCCAGTTTGCGGCTGCCGCGGCCGCTGGCCAGGAGGCGCGTGCCCACTTTCGGTTCGCGGACGCCGAGCTGCAGCTGCAGCCGGGCGTTTCGATGGCTGGCCGTTTGGGTGAATCGCTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAATCAGGCACTGGACACGCTGCACATCTCGCGACGCGTTCGCGAGCTGCTCTCCGTGCACAACATCGGCCAGCGTCTGTTCGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCTGGACTGCCACAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCAGCGCGAACAGCGTGAGGCTGTGCAGCGCGAGCAGCAGCAACGACTGCGCCATGAGGATCTCGCCCAGGACAAGATGGCGCGTCTCTACCAAGAGCTAATGGCGCGCACACCGCGCGAAGCAGCCTTCCCCAGCTTTTTGCTGTCGCCGTTCTTTAGCGGCGCCGCTGGCATGCCTGGAGCAGCCGCCAATCCATTCCCCGCTGCCATGGCCGCCGATGAGAATATGCGTCACGCCTTCGAGCGTGAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCAACTTTTCCAGTTTGATGGCACTGCAGCAGCAGGTGCTGAATGGCGCGCAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTGAATGGCCAACGCTCGGCGCACGATCAGCACAGCGGCAGCGGCAGCAGCTCCAAGGATGGCGAACGCGGCGATGATGTTGCCGATCGCAGCTTTCCCGCCCTGCCGCACGCTCGCAAATCGGATGGCGGCAACACGCCCGCACCACCCGCACCGCCCGCCGTCAATGCGGCCGGCAGCGGCAGCAATCCGCTAGCCGCCGGCAGCGTCGCCGGCAGCGTCACCAGCGGCCATGGCAGCAACTCGGCTGCGCCCAGCCCATTGAGCAACTCGATACTGCCGCCAGCGCTGAGCAGCCAGGGCGAGGAGTTCGCGGCCACGGCGAGTCCGTTGCAGCGCATGGCCTCGATCACCAATTCGCTGATCACACAGCCGCCGGTGACACCGCACCACTCGCAACCGCAGCGGCCCACCAAGGCGGTGCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACCTGAACACGGAGGACATTGTGCGACGCGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGGCTGTTTGGCGAGTCTGTGCTGGGGCTGTCGCAGGGCTCCGTCTCGGATCTGCTGGCACGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGTGAGCCGTTCATACGCATGAAGATGTTTCTGGAGGACGAGAATGCGGTCCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCGCAGATGCCACAGGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGCCCAGGCCCAGCACATCATGCAACAGATGCAGGCGGCGGCCGCCATGTCCGCGGCCATGCAGCAGCAGCAGGCAGCGGCCGCCCAAGCGGCTGCCGTGCAGCAGGCCCAGGCCCAGGCCCAGGCTCAGGCCCAGGCACAGCAGAGCCACCAGCAGCAGGCCCAACAGCAGGCCCAGCAGCAGGCCCAGCAGCTGCTCCATCATCAGAATATGCTATTGACGTCGCCCGGTCTGCCGCCCCAGCATGCCATCAGCTTGCCGGCGGCGAGCACGCCCAGCGGCCAGGCGGGCGGCAATCCGCCATCTGTTGCCACGCCCGGCAGCAACGAGAAGAAGCCGATGATGATGCCGGTCCATGGTGGGGCGCATGCTCCGAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCGACTGTCTATGAGATGGCCGCGTTGACCCAGGATCTGGACACGCACGATATAACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGCGAGCCGTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGGCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGGCGTCGCAGCACCGGACCCAATCAGCAGGACAACAGCAGCGACACGTCCAGCAATGATACTAACGATTTCTATACGAGCAGTCCGGGTCCCGGCTCGGTCGGCTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGAGTGCTCTTCTCCGAGGAGCAGAAGGAGGCGCTGCGCCTGGCCTTCGCCCTCGATCCGTATCCGAATGTGGGCACCATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAATACCAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATCCTGCTGCAGCAGCGGCTCGTCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGTGCGCCCATACCCTACCCACCGTACTTTGCCGCCGCCGCCCTGCTCGGCCGCAGTTTGGCGGGCATTCCAGGCGCTGCGGCGGCTGCTGGTGCAGCGGCTGCTGCGGCCGCCGCCGTCGGCGCCGCTGGCGGCGATGAGCTGCAGGCGCTCAATCAGGCCTTCAAGGAGCAGATGAGCGGACTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGACGAGCTGGAGCTGGACGCCAGTGGCCAGAATATGAGCGACAACGAGTCCATCGAGGGTGGCCACGAGCCCGAGAGCACCACGCCCATATCCGAGTACGAGAAGGCGCTGCAGAAGTCGGCGCTCGCCTCGGCCGCCGCTGGCTACTTGAACAATGCGGTGCGCAGTTCGCGCCGCAAGCCCGCCGCCCCCCAGTGGGTCAATCCGGCTGGCGCCACCACGCCCACAGCGGCGGGCGCTGCGGGTGCCGCAATCGCAGCCGGCGATAACAGCGCCAGCGAGCGCATCATCAACGGCGTCTGCATCATGCAGGCCTCCGACTACGGACGCGACGAGGGCGACAGTGTCAAGGGCGGTGAGTCCAATGCCGATGCCGAGCACGATGATCATGCGCACCTGGAGATTGAGCAGCGCTTCATGGAGCCGGAGGTGCACATCAAGCAGGAGGAGGAAGACGACGATGAGTCGACCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAGAGTGCAATGTTGAAGACGTTTACTTGTGA
Protein Sequence
MRQGSNIHQLLIIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKTTDLTSTHRHNDDDDDDDDNDRDNELRDADGDDDDDLHLTNSEQQQQQQQPQHSALVNNRHDDEQDKEDAEEHDAEIANATAAADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSTDAVSDGDMGHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPGFLPNLPSLPFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIXXXXXXXXXXXXXXXXXXXXXXXXFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSAHDQHSGSGSSSKDGERGDDVADRSFPALPHARKSDGGNTPAPPAPPAVNAAGSGSNPLAAGSVAGSVTSGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQAQAQQSHQQQAQQQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPSGQAGGNPPSVATPGSNEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGQNMSDNESIEGGHEPESTTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGATTPTAAGAAGAAIAAGDNSASERIINGVCIMQASDYGRDEGDSVKGGESNADAEHDDHAHLEIEQRFMEPEVHIKQEEEDDDESTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPECNVEDVYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00549444;
90% Identity
iTF_00549444;
80% Identity
iTF_00549444;