Basic Information

Gene Symbol
Arid2
Assembly
GCA_018153725.1
Location
JAECYD010000080.1:7864535-7872128[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-24 2.6e-21 75.8 0.0 2 89 83 169 82 169 0.93
2 2 5.7 1.5e+04 -3.5 0.0 27 64 1623 1662 1613 1672 0.73

Sequence Information

Coding Sequence
ATGACGTCCATTGACAGCGTACGCGTGCTGCTGCAGTCTCTGCCAGCAGCATCGCCTGCTGCTGCCAACAACAACACGCAGCAAAATGAGTCGACGCCGGCAAAACTTGGCGCTGCGGGAACCCCTTTGCGCGCGAGAAATATACAGCAACAACAGCTACAAGCACAACAGCAATTAAATTTTGGAACGCCCGAAAAGTCACAAGCTGGAGAAGCACCTGGAGCTGAAGAACAGCAGCTGAGTGCTCCGGACGAATTCTGGCGTGATTTGCATCAGTTCCATGAGCGGCGCGGCACCCCACTGACGCAGGCGGCCAAGATCAGTGGCCAACATGTGGATTTGTATCGACTATATCAGGAGGTCACGGAACGCGGTGGCTTCAATAAGGTCAACATGCGCGACGAATGGGACGAGGTGTACAGCGCGCTGGATACGCTGCGGGATCGTTGCGTGAACGGCACCGCTGGCATCAAGCATATCTATCGTCGCTATCTGGACAAATACGAGCGCCTCAACTTTCTGGGCGAAGATCCGGACAAGCTGGAAGCCTTGGAGGCGGCCATCGAGTGTGTGGAACTGGGCACCAGCGCCAGTCGAGTGCGCTCTCGCAACTTGGCCGGAGGGGCCATTGGAGGTGCAGGCGGCAGCTTGACAGGAGGTGGCCTGGGAAGCATCTTTGGCATGGGCCACTCCACGCTTACGGCCGTGCCCATGGCGTACAACCAGCGCCAGCACATGGTGAATGCGGATCGCCGTCGCCAGTACAAAATGTCCACACAGCTGCATAAGCACAGCAGCTACGAGAAGCTGCTGTTGTCGCTCATATCGCCGCTGCCCAACGAACAGGACTTTGCCATCAACGTGTGCACTCTGATGGCCAACGAGCCGCGTTCCACTCTGCAGCTGACCGAGTGCCCCAAGCTTCTGGACGTCCTGCTCGCTCACCTGGGTGTTTATGCGGACTACAGCATGCGTCAGCTCTTCCAGCACGGCCACAACAATAGGGGCACGCTGGTGCGGAAGCATTCTAAGCTTAATTTCTGGCGGGATTTGCTGTACGACAAGCCTCAAATACTGGACCTCTATACGGATGAGCAGGCCTGGCGGGACAACGGTCTGATCAGCAAGGACAGCGATCCCTTCGACGACTCTCTGTTCCAGTCCGATGAGCTCGACTTCGAGCTGGACTTTCTGAATCTGCGCCGCAGCCACGGCACAGACGAACGCATTGGCCAGCGCGTGCTACAAATTGTGCAACTGTTAAGGAGCTTGAGCTTCCATCAGGAGAACGTCACGTTGCTTGCGTCCAATCGCACGCTCTGGAGATATCTGGTCATGGGCGCCAATGTGCGGTGGAGCAACATTCACATTCAGGCCTTGGAGACGGCTGGGAATCTGGCGCAGCAGTTCGAGTTACTCGATCCCGCCACAGACGAGTTGTCGAGGAATTTGCTGGCCACGCTGTGCGAGGGCGTCGAGTCGAATGACCGTGCCGTGATAATCAGCTGTCTGGAGATCCTCTACAAGCTGTGCGGACGCGAGGGCAATGCACAACACATAAATCGTTGTCTCGGACTGGACTTTTACCATCGTGTGATGCTATTGCTGTCGCTGACGGATGTAATGCTGCTCATCTTCACCCTGGAGGCGATTTACGCGCTGAGCACGTTGGGCGCACGTCCATGCTCCATGCTAATGCAGGTGCGTGGGCTGCTGGATCAGTTGGTAGCTCTCCTAACTGTAGAGGCGCAGTCGTACGGCGCTGCGGGCTGCATATTGATGCGGGTGGTTGAGGTGGTGCCGGGCAACATATTGTCCACAATGTCGCAAAACATGCCCAGCTCTCAGATGACGCCGCTGATGACGGTCAAGCAGCCGCAACCGCAGCCGCCAGCGGCGATTCCATCGCTGCCTCCGCCGGCACCCACACAGGTGCAGGTGCTGCCCCCACCGCCGGAGACAGTTTCGCTGCCTGTGACAGCGCCTGCGCCTGCGTCAGCTCCTTCTCCTGCTCCTGCTCCTGCAACTGTAGCTGCCCCTGTTGCCATACCTGCGCCTATGCCCCTGCCCATGCCCAGCCTGCCCCAAGTGCAGCTGCCAGTGCCCAGCCTGCCTCAGGTGCAGCTTCCGCCACCACCCACCCTACAAGCACCGGCTCCACCTGCGCCAGTACCCACTGCAGCCACTACAATAGCGCTGCCCGCTGCGCCATCTGCGCCGCAGAGCTTTACCCACGAAGACGAGACCTATGCGCTGGCCTGGCTAGGCGCCACTTACGAGCGGGCCGGCAACGGGCACGATTATCGCGTGGAGCAACAGGAGCTGTACACCATTTACCTGTCGCACTGTCAGAAGGCGGGCAAGCATTCGGTGGTCAACCGGGTGCAGTTTCCGCGTCTCGTGCGCCTCATCTTCAATGCAACCGTCGGACCCGCCATCGTGCGACAGATGGACGGAACAGAACTCCCCGGCACACACTATGTTGGCATAAGGATGCGTGCACAGCCCTTGCCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGAAGAAGGACGCAACTGTGGCGCCCAAGTCAGACCCATCAAGCGGCGAGTCGGGCGAGGATGTCGTTGCCTCGCCCACACCCAGCTCCTCGGTGATTAAGAGTCTGCTGGCGAACAAAGTCAACGAGCGACAGCTGAAGCAAAAGGCGCAGGCGCAGCCGCCCGCTCTGGTGGCCACCACCGCATCCTCAACTGGCTCGCCGGCCGGGCAGCCCATCAAAGTGACCTCCACGGCAATCAGCGCATTCGTCAATAATCCGCTGATGCAGCACACCCCCGTGAAGGTGGGCCAAACCACCATAAAGCCGCTGCATCCGCAGCTGCCCATGGAGAAGAAGCCAATGACGGACTCGGCGCCCCCGCCGCTTGCCCCTCTCAGTGGCTCCAACGTGCTGACAAAGGACGCGCAAGGACGCACAGTAATTATACAGTCCAAGCGGAAGCTCACCATCGATGAGGAGCAGAACAAACGGCTGGCCTTGGATGGCAGCAACGCGCCCGCTGGGAAGGATGACCCTCAGGTGACGCCCTCCAAGAATGCGGCTAATCTCTATGCGGACTTGGCTGCCTCTATACTGGAGGATGAGGATCTGGATGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCTTTCCCGCTGGCAACGCGCCGGCGCCGCCGCCGCAGCTGAAGTTGGCTACGACAGCAACCATCAAGACGGACCAGGGCCTGCAGACGGTACCGGTCATACTGCAGCAGAAGACGGAGCAGCAGCAGCAGCAGCCGACGCAGACGCAGTACGTTCTGGCCACCAATCAGCAGGGTCAGACCTATTTGGTGGCCCAGCAGTCGGCGCCGGTGGCACCCTCGCCCAGTGCACCCGGGGCACCCACTCTCCTGGTTACGCAGACGCCGCAGCAGCAGACGAAGACGATCATCATTTTGCAGCAGCCGCCGGGCGTGAGTGCTAGCAATGCGCCCGGCACACAGAAGGTCATCATGACGACAGCGCAGGGGCAGCAGGTGCTGGTGACGACCACCACGGCGCCAGCGGCGGCGGTGCGTCCTGCTGCCCAGGTCCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAAATCTTTATAAATCCGCAGCGTGCAGTGTCCGCCGCATTGGGAGCGGGCCAGATGTCGCCCTCGCTGCTCTCACAGCTGAATCAGATTCCTGCCACCATAAAGCTGCATCAGCCGCAGCCGGCGCAGGCCGCGCAGCTTCATCGGACCGGCATAGTAGCCAGCAAGGCGGCACCAATACCTCAGCTGCAGCAGCATCAGTCCATCATACAGCAGCACATCATCTCGAGTCCCGCAGCCGGCGCGGAGAAGCGGCAGCTGCTCTTGGGTGGCATCAAGGAAACGACACTCATCACCCAGACGCCCGTGACGGCTGCCCCACTGCAGCAGAGCCAGCTCAACTCGCAGACAATCATAACCACCCAACCACCGGTGGGGGCCACCTCAGTCGTGGGCGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTCCATCATACAGCAGAAGATAACGATGCCCATGGCGCTTACGGATGCGGCCAAGGTGAAGCCGGCTCAGGCAATACCCGTTGCCAAGAAGCCAATGCCGCCGCCCACGCCAGCGGCAGCTCCTGCACAGCAGCATCCGGTGCAAATGCCTGTGCTGAAGCCCACTCAGCAGGCGCAGCTGGAGAAGCCGTCATTAATAGTTGAGTCGAAGCCAGCGGAGCAGCCAGCAGTCACGGCTGCAACAGTTGCCAGTCAGATGCCATCAGCAGCAGCGGGAACAGTTGTTGCCACAGCAACTGCAGCGACCACGAGTGCTGTGACCCATGCTAATCCCTCCGCCGCTCCAGCTGTGAATGCTGTGAGTGCTGTGAGCGCTGTGCCCGTGGATGTGAATTGGCTGTTCATTTGCGATTGGCGCAACTGTCCACGTCGCAAGTTCAAATCGCTCAACGAGCTGCAGCATCACGTCTGCAATGTGCACTGTCCGGACCACTTGGACCCGGGCGCCGAGATCTATTGCCAGTGGGGCAGTGGCCCCAGTCTGTGCGACAACATAGCGCGCAAGCGCTACTCGCTGATGACGCACCTCGTCGATCGTCACTTGGCGCTGGACGACTTGCGAGCCAGTGTGCAGCGACGCCTGGCCACGGGCATCCACAATGTGTCGCCCGCCCAGCCAACGGTCACCATAGTGCGCAATGTGGGCAGTGCCAACGCGCCGGCAGCGGCGTCAGCGGGTGCTCCAGCTACTGCAGCCACTGCTGTGGGAACCTCTGCTCTGCAGGCGATCAAGCGGCACTCGGCTGACTTTCTCAACTCGAAGGAACTGATGGACGAGAACGAGGGCCCAGTCACGAAGAGCATACGGCTTACGGCTGCGCTGATCCTGCGGAATCTGGTCAATTACTCAGTGACGGCCAAGCGGAGCCTGAAGCGCTACGAGCCCCATCTGGCCAATGTGGCCTTCAGTAATGTGGAGGCTAGTGGCGTTCTATCCCACATACTACACGAGCTGAGCCAGTAG
Protein Sequence
MTSIDSVRVLLQSLPAASPAAANNNTQQNESTPAKLGAAGTPLRARNIQQQQLQAQQQLNFGTPEKSQAGEAPGAEEQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVELGTSASRVRSRNLAGGAIGGAGGSLTGGGLGSIFGMGHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNNRGTLVRKHSKLNFWRDLLYDKPQILDLYTDEQAWRDNGLISKDSDPFDDSLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYHRVMLLLSLTDVMLLIFTLEAIYALSTLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNILSTMSQNMPSSQMTPLMTVKQPQPQPPAAIPSLPPPAPTQVQVLPPPPETVSLPVTAPAPASAPSPAPAPATVAAPVAIPAPMPLPMPSLPQVQLPVPSLPQVQLPPPPTLQAPAPPAPVPTAATTIALPAAPSAPQSFTHEDETYALAWLGATYERAGNGHDYRVEQQELYTIYLSHCQKAGKHSVVNRVQFPRLVRLIFNATVGPAIVRQMDGTELPGTHYVGIRMRAQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKDATVAPKSDPSSGESGEDVVASPTPSSSVIKSLLANKVNERQLKQKAQAQPPALVATTASSTGSPAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDEEQNKRLALDGSNAPAGKDDPQVTPSKNAANLYADLAASILEDEDLDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFPAGNAPAPPPQLKLATTATIKTDQGLQTVPVILQQKTEQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAPSPSAPGAPTLLVTQTPQQQTKTIIILQQPPGVSASNAPGTQKVIMTTAQGQQVLVTTTTAPAAAVRPAAQVQQQQQQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAAQLHRTGIVASKAAPIPQLQQHQSIIQQHIISSPAAGAEKRQLLLGGIKETTLITQTPVTAAPLQQSQLNSQTIITTQPPVGATSVVGAAXXXXXXXXXXXXXXXXXXXPSIIQQKITMPMALTDAAKVKPAQAIPVAKKPMPPPTPAAAPAQQHPVQMPVLKPTQQAQLEKPSLIVESKPAEQPAVTAATVASQMPSAAAGTVVATATAATTSAVTHANPSAAPAVNAVSAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDPGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNVGSANAPAAASAGAPATAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00554180;
80% Identity
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