Basic Information

Gene Symbol
Ubp1
Assembly
GCA_018153725.1
Location
JAECYD010000079.1:7994533-8010528[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.74 6.7e+03 -3.9 1.6 108 129 32 53 25 120 0.61
2 3 1e-51 9.3e-48 162.4 0.0 23 182 422 578 405 586 0.93
3 3 2.3e-13 2.1e-09 37.0 1.0 188 222 659 693 652 694 0.90

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCCCAAAGTTCCGGTCTGTTGGATTTACACAGCATATTTGATCCGCAATATTCAATACAACAACAACAACAACCGCATCAGCAGCAGCAACAACTGCAAATTCATTTATCATCAGACCAACAAGAACAACTACAACAACAGCGCACTTCAACGAAATTTGATCTAAGCATATTCAACGATTTCGACCAAATGGAATTCAACAACAACTTGAATCGAAATCATCATAATCAGTATCCGAATAATAATAATAACAATAACAGCAATAGCAATAATAATAATAATAATACCATCAACAATAACAATACCAATAACAACAACAACAACAATATTCATACGCACCAAACTAACGGAGAAAATCTTAATCAGATCCAAAATAATCATTTCATTAGCGGCTATCATCATCAGCATATTGGGTCGGATTATGAGCCAGTGATTAACTTTGTTGATTCACCGCCAAACTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCAGGACCGCAAATTATCGACGTGAGGACAATTTACTCAGACAGTGGTTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATTGGTCAAAGTGAAAATTCACCGACAACTCAATCAGGCGAAATACCCAATAAGGTGGCACATCACGAGAAAGATAAACATAAACGCGAAAAGCATTCAGGTCGTAGCAGCTGGAGCGACGATATAGGTTTTGATCTGAACGCTGAGTTTAACAGTAACTCGTATTTGAACAATGAAAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTTAAACAGGAGCCGCAAACGGAGCAGCTCAAACCGAACGCAAAGATATCATTGGATAGCGGCAGCACCGGCTCCGCAATTGGCAAAAGTGACAAATCGCCATTGGGCGAGGCAAATCACTCACCACAGCGAGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGCGGAGCACTTGTCGAAGCTGGCGGAAAGCATGAGTTGAACACCGTCAACATTTGTGGTTGTGGCTCGCCGCAAGGCTCGCCCACCGCAGCGGATTTTGAATTGAATTGCAGTGGCAATGGGAACGAAGCAGCATCGGCTGAGATAACCCGAACTGCATCTGGCCGTGAGGCCTTTGCACAGGCGCCGCGCTCTGGACTGCAGCAGCAGCTGAGCGTTGTCGAGGCGGCCAAAATAGAGCCCTGCCTGTCGGGCGGTGCATCTCATGCAGAGGATCATAAATTTCAGTACATTTTGGCCGCGGCCACCTCAATTGCAACGAAGAACAATGAGGAGACATTGACATATCTGAATCAGGGTCAGAGCTATGAGATCAAATTGAAGAAAATTGGAGATTTGTCCTTCTATCGCGATAAGATCTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGCCGTTTGCAGTTCATGGAACGCGAACAGATGCAGCAATGGCAGGCATCGCGTCCAGGTGATCGAATTATCGAGGTAGATGTACCATTATCGTATGGCCTGTGCCATGTGTCGCAGCCATTGAGTGCGAACGCATTGAATACGGTTGAGATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAGGTTAATTGCATTTCGACCGAATTTACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGGCTACAAATTGAAACCTATATAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCGGGCATTACCTCGCCGGGTCAGACCCTGACAAATGGCAAACAGGCCGTGCATGCAGCTGCCTGTCAGATAAAGGTCTTCAAGCTGAAGGGCGCCGATCGCAAGCATAAACAGGATCGCGAGAAGATCCAGAAGCGTCCGCAGTCCGAGCAGGACAAGTTTCAGCCCAGCTACGAGTGCACCATCATGAACGATATATCATTGGATTTGATAACGCCAACCACTACAACTGGCTGCTATAGTCCTGAATATATGAAATTGTGGCCAAATTCGCCGGTTCATATACCAAAATATGATGGAATGCTGCCATTTGCCAGCAGCGCATCACCGGCGGCCAGCAGCAGCCCAATTGCTATCAATTCGGTGACATCCACAAATTCGCCAACATTGAAACTGATGGATGCCACAAACATGGTGTCGCCACAGCATGTGCCAGCGGATATGGATGATTATAATCAGAATATAATGCCAGAATCAACGCCCGCACAAGTCACACAATGGCTCACGCATCATCGTCTGACGGCCTACCTCAACACCTTTACCCATTTCTCTGGGGCGGATATTATGCGCATGTCCAAAGAGGATCTAATACAAATCTGTGGACTCGCCGACGGCATACGCATGTTTAATATATTGCGCGCCAAATCCATTTCGCCTCGTCTGACGCTCTATGCCAGCATGGATGGCTGCAGCTACAATGCCATTTACTTGCTCTCTAATACCGCCAAGGAGCTGCAGCAGAAGATCTATAAGCTGCCCGGCTTCTATGAGTTCATGGCCAAGGGCGGCTCGTCAGGCCTCTTGGAGAATGGTGGCAATGTGTCAGCTGCCTCAGCAGCAGCGGCGGCGGCGGCTGCTGCCGCTCTATGCAACAATTGGGGCATGCATTCGAAATATTCGGGCAGCGGCTCGAACATCTTCAACGAGGCGAACAAGAGCAGCGTCTACATATCGGGGCCATCGGGCATACTTGTCAGCGTCAGCGATGAGGTGCTCAACAATGAGGTGAAGGACGGCAGTCTCTATGCCCTGGATGTGCAGGGCGGCAAGGTTATATTGAAGCTGATCAATAAGCAGGATAATAATTAA
Protein Sequence
MALSFLSQSSGLLDLHSIFDPQYSIQQQQQPHQQQQQLQIHLSSDQQEQLQQQRTSTKFDLSIFNDFDQMEFNNNLNRNHHNQYPNNNNNNNSNSNNNNNNTINNNNTNNNNNNNIHTHQTNGENLNQIQNNHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTTQSGEIPNKVAHHEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNAKISLDSGSTGSAIGKSDKSPLGEANHSPQRAXXXXXXXXXXXXXXXXXXXGGALVEAGGKHELNTVNICGCGSPQGSPTAADFELNCSGNGNEAASAEITRTASGREAFAQAPRSGLQQQLSVVEAAKIEPCLSGGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSANALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGITSPGQTLTNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLITPTTTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTHHRLTAYLNTFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKSISPRLTLYASMDGCSYNAIYLLSNTAKELQQKIYKLPGFYEFMAKGGSSGLLENGGNVSAASAAAAAAAAAALCNNWGMHSKYSGSGSNIFNEANKSSVYISGPSGILVSVSDEVLNNEVKDGSLYALDVQGGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00479256;
90% Identity
-
80% Identity
-