Basic Information

Gene Symbol
grh
Assembly
GCA_037043585.1
Location
JBAMBE010000436.1:3355412-3386519[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.38 3.2e+03 -2.9 5.5 80 111 239 271 169 321 0.61
2 3 0.38 3.2e+03 -2.9 1.3 95 104 551 560 525 579 0.53
3 3 2.7e-63 2.3e-59 200.3 0.5 24 221 689 881 675 883 0.94

Sequence Information

Coding Sequence
ATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATATCGGAGTCACGGCGCTATAGCTTGGAGCCCGCACAGCAAGCAACGCCGCCCCCGCCACCAGCACCttcagagcaacagcaacagctgcaactgcagcagcaactccatcatcagcagcagcagcatccacatccacaaccacatcatcatcttcaAGCACACCATCTTaaccatcatcagcatcatcatcagcattatACGAGTCAATCGCCACCGCATTACTCATATGTGCCACCGCCCAAGGATGCAGCAGCTCAGTTGCAACAGCATCTGCCGCTGACCGCCGCTGGGCTCATGCAATCGGTGGCCGATGAGATTCAACTGAACGAACAGCAATCGACAccgccaccagcaccaccgcccccaccaccaccaccgccgccgccgccaacaGCACACGCCTCCAACTCCACCTATGCGGTCTACAGCTACTACCGAgatgtcgatgtggatgtcgatgtggatgtcgagcagcaacagcaacagcagcagcagcagcatcacaaTGCTAGATCACAACAAGATCAGCAGCTACTGTGGAGCAATGCGAGCAGCACCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTTTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGtgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacagcaacatcagcagcaacagcaacaacagcagcaacagcagcatcaacagcagcaacagcaacaacaacaacaaccgccaCATCCCAGCGACATTGTAACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCTgcagtgcaacagcagcaacagcagcagcagcagcaacaattgctgagCATCAAACGTGAACCAGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcaactgcaactgcattcGAAATTAGCGATaaaacagctgctgcagcaacaacaacaacaagaacaacaagtgAAACTGCAACTAGTCCCGCCAGCGCCACAACAGATCTAGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTATATCACAACGGATAGCTATGGCATGTATACGGCCACAAGATTGCCTCCCGGCCCACCGCCCGCAACCACATTCATAACGGAACCCTATTACCGCGAATACTTTGCTCCCGATGGCCAGGGTGGGTATGTGCCCGCCGGCACAGCGCGCAGCCTCTACGGCGAGGATGTATCCGTGGCGGCGGCCACCCAACCACAGCCCGTGGGCGGTGTCTACGAAGCGCGATTCACCAGCAATGggcccaccaccaccacagtGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcaacaacagcagcagcaacagcagcagcagcagcagcaacatcagcagcaggagcagtcgGGCAAAAGCGGCGGTACTCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTCGATTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATCACGCCGCGGGATCAGAATCACATACAGCagTCCTTCGACTATACGGAACTTTGTCAGCCGGGCACCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTCAACAGCATCCAGCAGCGCACTGTGGTGCACGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACAAGCACAAATGGCTCGACCCGCTCGAGACCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatcTTCACAAATGTGGGCTTTCGTTATAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGaTACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCAGTCCAATGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTTAAAGGTCTGCCGTTGCACGTCCAAATCGATACGTTTGAGGATCCGCGGGATGCGACAGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAACGAAAGACGCGCGACGAGGAGCGTCGTGCCGCAAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCACCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGATATGGAAAAGaGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCGTTCTTGCTGCACGGTCAGAAggtggccacgcccacgctCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCCATGTCCGATTTTGGGCCACCAATGAAACGGGGCAGAATGACGCCGCCGACAACGGAGCGGGTCATGCTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCGCTCCATGTGGTGCCCCCAACCACCATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGAGCATAAATAACATATATCGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATTTTCCTGCTGGAAGTGCAGCAGATTGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAG
Protein Sequence
MQDATSSYAISYTDWISESRRYSLEPAQQATPPPPPAPSEQQQQLQLQQQLHHQQQQHPHPQPHHHLQAHHLNHHQHHHQHYTSQSPPHYSYVPPPKDAAAQLQQHLPLTAAGLMQSVADEIQLNEQQSTPPPAPPPPPPPPPPPPTAHASNSTYAVYSYYRDVDVDVDVDVEQQQQQQQQQHHNARSQQDQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQHQQQQQQQQQQQHQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATATATAFEISDKTAAAATTTTRTTSETATSPASATTDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQHQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
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