Basic Information

Insect: Drosophila mimetica
Gene Symbol: -
Assembly: GCA_037075245.1
Location: JBAMCH010000023.1:14989192-15022023[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.055 4.3 8.2 0.5 1 23 1254 1277 1254 1277 0.95

2 8 0.0059 0.45 11.2 0.1 1 23 1282 1305 1282 1305 0.98

3 8 0.0025 0.19 12.4 3.4 1 23 1589 1612 1589 1612 0.95

4 8 0.0007 0.054 14.1 1.3 1 23 1620 1642 1620 1642 0.98

5 8 5.3e-05 0.004 17.7 0.2 1 23 1649 1672 1649 1672 0.97

6 8 1.9e-05 0.0015 19.0 1.4 1 23 1678 1700 1678 1700 0.97

7 8 1.5e-06 0.00012 22.5 1.9 1 23 1705 1727 1705 1727 0.99

8 8 0.42 32 5.4 8.5 1 23 1732 1754 1732 1754 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.055	4.3	8.2	0.5	1	23	1254	1277	1254	1277	0.95
2	8	0.0059	0.45	11.2	0.1	1	23	1282	1305	1282	1305	0.98
3	8	0.0025	0.19	12.4	3.4	1	23	1589	1612	1589	1612	0.95
4	8	0.0007	0.054	14.1	1.3	1	23	1620	1642	1620	1642	0.98
5	8	5.3e-05	0.004	17.7	0.2	1	23	1649	1672	1649	1672	0.97
6	8	1.9e-05	0.0015	19.0	1.4	1	23	1678	1700	1678	1700	0.97
7	8	1.5e-06	0.00012	22.5	1.9	1	23	1705	1727	1705	1727	0.99
8	8	0.42	32	5.4	8.5	1	23	1732	1754	1732	1754	0.98

Sequence Information

Coding Sequence: ATGAGGCGTCGCACCACGTTTGCCACCACATTACCCACTGCTCCTCCTGCGCCTCGTGAACGGAGCAGCGATAATGCCGTCGACTACACCCTCAGCGGGGCCCACAGCAGCATGGACATTGTCCTCGAGGAGATGACCATTTGGATGCTCAATATAAATCGCGACGATGGACTGCCGCAAGAAATCTGCCGGCAGTGCATGGCCCAGTTTTTGATGGTGGCCAAGTTCCGGCGGAAATGTGTACGGATGCAGCAGCGACTGCAGGACTTTGCCCAGGAGATATCCGACCGCCAGACGGCCCGACAAGCGAAGCAGCGTCATCAGCAAAAAGTCCAAAAGAAGAGTCAGGATAGCGAGGAGGCATCCACATCGACAGCGACGACATTCAGTAGCAGCAGGGCGCCGGTGCGAAAGCGACGTATGGTATCGGAATCGGATACTACCGGAGAATCGGCATCACAagctgttgttgccgtgaAACAGGTGCGAACGGAAGCGGGCGATTTGCTGCTGCCACCACCGAAACCGAGTCCAGTTCCACTCCGTCTGCGCAAGTATCGCACCTACTCCATTGGCTGTGAAATGGAGCGTCCATCGACCATCGATGCCAGCAGCATGCCCTGGAAGACGAAGGCGGCGCGCAAGCAGCTCTCGGAGACCTGGTCGTCCAGTTGCTCGCCGGAACCGAGTCgccaaaacagcagcagcaccagcagcagcagtgagCACACCAGCGATCTGTCCGTCGGTCCATGCTGTGGCTTCGAGAGCGACAGCAAtcccacctcctcctcctcctcctctacCTCCAATTCCGCAACCAAATCGCTGGCCATTAGCGGCCGCGTGAAGTCCCCAAAGGCCACGCCTTCATCGCCAGTCAATGATTTATTGCCGCGACGGGGTCGGCGGCCGAGGAATGCGCCAATATACCATCCACCTAAGAGACAGCGTCGATCGCTGGTCAAAAGAGAGCCGGTGAAGCGAAAGATTGTGGCCGACGAGCCAGAAGTCACTGCAGAGAATAGAAAGTCTGAGCAAAAGGATATTTTCCCCAAGGAACCAAAGGTTGAAAACAACAgtgccgcctcctcctcctgcgatGAGGCCATCGACAGCACTTCTGATGTCCCAAAGGAAGTGCCCACAAATGTCGACCAAGATCCAGTTAATAATACGATCCTGGTTGAAAAGGAGAAGGAAATCACATCGAATGGTTTGATAGAGAGTTCCAACCAGGAGAATTCTATGAATATGGAGTCGGACAATGAACAGATAACCTTCTACGAAGTTGAGCAAAATGTTTCCCAGAAATTGGAGGAAGTAGAACTACCTAAAACCGAAAGCAACGGCATCAGCGTTCCATGTACCGACCAACATGATGCGGAGATACTCGCCAACGAGTTACTGGAACAGTTCGAGGCCACCAGCGTCATCAAGTCAACGTTTCCTTCAGATGATCCCTGCATCAAGCAGGATATCGAGTCAATTTTGAATGTCattgaagctgaagctgatcTGGTGCAGTCCAAGGAACTGACCTCATCCACGGAAACCAGTGAGTTGCCGGCGGAAATTGTTGAGCAGCAGCTGGAAGTTGTGGAGCTGCTGGAAACGGAGACGACGGGAGTGCAACAAGAGGCCGCAGAGCAGCCGGAGATCATAGTGAGCATACCGCTGGAGGCGCTCGACGAGAATCTACAGCGTCGTCTCTGCCCGGATGCGGAAAACGAGGAGTCCGCCGCGCCCAAGGACTTGCCCCTGCAGTCGTCCGATGACGTGAATAACAATGAGAACGATGAAAATTTTTGCCAGAGTGCTACAGCAGGTAGCTTCAATTCTGCTGTGGCACTCCGAATCAATAAAATTGAAGCAACGCCACCCGGTGGGGGAACGGGAACGGAATCGGATGGAACGGAGGATGACACGAACGAGGTGCAGGCGGTGCGTTCCGGACCCACGCCCATGGACTTTATGGCCGAGTTTGCCAAGCACTGTGCAAACGGCATTGAGGAGCTAAAGGCCACCACTCCGGCGGAATCTCCGACGCCCTCGGAACTGCTGCCCTTCAATGATCTGGATGCGAAGCAGAAGCTCGAGGTGGAGATGAACGACGTGGAGACGACGCTCAATGGCATCCTCAACGAGATGCAGGACCAGCACATGTACACCCCGAGTTGTGATGAGTTTCTCACGCCCGCCGATTATGCTCCCATGACCGAGCAGGAGACGCCCATTTCATCGCCGCCGCCCAATCCTTTCGAGCAACAGAGTCCAGTGGCCGTCGAGGCGGAGCCCAAACCCAGTGCCACCGATGATCCCTTTGATAACAGCAACTTTAGCAACGAGCTGATTGGCTTCCAGAACGATATTCCCTGCTTTGAGAACATCGAAGCTACTGCGGAACAGGGCCAGAACTTGCATTTAGAGCTAACGCAGTTTTTGCGAGACCTCCAGCCGGCACAAACGCTTCAGCCGTCGTCCGAGGAACAAGTTGCCGAGACGAATCAGGCAACTGTCCAGATGGATGCCGTCCAGGCCAACCTCCCAGTGCAACCAGCCGATATCCAGCCTCAGAATGAGTCCACAGAACATTCCCCAAATGAATCTCCCATATCATCACCTCAAGTTCAGAACCAAATGGAAATTTCGATGGAACCTGAAATCGACACTCAGATGCAACAGCATGAAATCCTAAGAGTGCACACACCACACAATCAGCCTGAAGTACAATCTCATGACCAATCTCAGATGCAACACCGAATCCCACCGCAAATCGAGCCTCAGATTCAAGTTCAAAGCCATGAACCTCAAACCCTACAGATTGTGCCGCAAGTTCAGCGCCAAGTGCTACCCCAACAAGTGCATCCCCAGCTGCAGCTCCAGTCCCCGACTGCCGCCGCCAGGGTGCCGCATGTCCAGACGCAGGGCACGACGACGACGGTCACCTACGAGCAGTACTATCAGCAGCACATCGTGCAGCAGACTGTGCAGCAATCCTCCAACAAGATGCAGATCATCTCGCTGCCCGCTGGCGGATCGGAAACCAGACAGTGGCAGACGCAGCAGTCgtcgcagcaacagcagcagctccagtgGTCATCGGTGGGCGGACTGGAGGCCATCAAGAGTGCGCCGGTGGAGCGTGTTGCACCCACAACCACAACGTACTACATCAGTGCCCGCGAATTGCAGCCGGCGATAGGTGAAACCTACACTATGCTACAGCCAACTGCCAATGATCGATACATGCTAGAGCGTGTAAaccaccatcagcagcagcagcagcagcagcaacatcaccagcaacagcagcagcaacgtcaCCAGCAGCAAATTCTACTGGcccggcagcaacatcatcaggcGCAGCAGCAACCGATTATGATACTGATCCAGAAGCCGGACACTCAGCGGCCGGTGGCCTCGGCCAGCAATCCGCAGCAAGCACCGATGCTCGTCCATCCACTGCAGAACGCGCAACGCCAACAGATACGACAGCACATTCAACGGCACCagttggagcagcagcagaagcaacagcagcagcagcaacaaagtcGACTCGTACAAAGCCATCCAGTATTGGGAATGCCGGGAGCCACATCGATATCCACCAAAGTGAACCCCATTCCCGCCACAACGCCCAGGGGTCGGGCACTGACGCTCAAGTGCCGGTTCTGCCAGAACGGACCCCGGTTCTCCAGCAGCGTGGAGTACAGCAAGCACATCATCGATCTGCACCCGGCGGTGGCGCCATTCAACTGTCCCCACTGTCCGCTGGCCTTTGCCGGCAGGACGAAGCGATCGCAGCACATACTCAGCGAGCATGTGGTGCAGCAGTACCAGTGCGGCCAGTGCTCCCAGGTGTTCCCGGCCCAGAAGGCCTTGGACATTCACATCCAGCGATTCCACATTCAGTTGAAGACATCGCCGCCGGGGGCGGTGCAAGTGGAGGATGTCCAGCTGCAGATCACCAACGATCGGAGGCGGGGCAGGCCGTACAAACCACggttgcaacagcagcagcaccaactacatccacagcagcagcagctagcGCAACAGCAAGAAgcgcaacaacagcagcaacaggcacaacaactgcagcagcaacaagcgcagcaactgcaacagttacaaccgcagcagcagcagcaacagcaacaagtgcagcagcagcagcagcaacaacagcagcaacatgtgtTGCAAGTGCAGCAACCACAGCAACAACCGTTAATGCAGCCACAGTCGCCCCATCCATCAACCATGGAAATCCAAGCCAGCCCCACAACGCCGCGTAAGATTCTCTGCTGTCCCGATTGCGAAGACTGCACTTCCGGCCACAGCCACGgcaacgacaacgacagcgAGCAGTGTGAGGAGCagctggcggcggcggcggcgacacTGCAGGCTCCGCCAACGGTGCTCACGCCGCCCTCGACAATCGTCTCGGCTGCATCGCCGCAGCCCAGCATGATGTACTCGCAGCACATAACAATGCCCTCGCCGGAACAATCCGAGCCAGATTCCACGACGACGTTGCGACAGTTCCGCAAACGTGGCGTGATCGTCGGCCCCCAGGGTCCGCTGCATTTGGCCACCCCGGTGGCCTCACCATCGCCCTCATCGTCGCCCTCCTCGTCGACAGTGGATCATGCGCCGCCAGCCTCGCCGGCTCCGCCCGCCTCGCCAGCGCCGCCTCCCTCGCCAGCTACGCCCACGGTGCAGGTGCAGGTGAACGAGCTGCGGACGTGCCACCAGTGTCTGTACTGCGAGGAGCGATTCACCAATGAGATCTCCCTGAAGAAGCACCATCAGCTGGCGCACGGGGCGCAGACAACGATGCCGTTCGTGTGCGGCATCTGCAAGCGTGGCTATCGCATGCGAACGGCCCTGCATCGGCACATGGAGTCGCACGATGTGGAGGGACGACCCTACGAGTGCAACATATGTCGCGTGCGATTCCCGCGACCATCGCAGCTGACGCTGCACAAGATCACGGTGCATCTGCTCTCCAAGCCGCACACCTGCGACGAGTGCGGCAAACAGTTTGGCACGGAGAGCGCCCTCAAGACACACATCAAGTTCCATGGTGAGCTCGGTTACCAGTGCGACGGTTGCGATCGGACATTCGAGTATCTGAAAGAATTGCGCAAACATCGACGCACCCACAGCGAGATGTTTCACAAATGCAAGTTCTGCCCAAGCTCCTTTAAGCGTTTCACGAGTTGTCGGGCCCACATGAAGACACATTTGCCAATGACGGTGTTTCGTAACGAGgaagccgccgccgcagcagccgcaTCAAAGTCACCCAGCAacaatagcagcagcagctcgagCAGTGATAAGCTGGAGAATCCACCCACGCCCATCGAGGAGACACCCCTGACGCCGatgagcagcagcggcggacACGTGTACAGCAGCCCGGATGAATACCCCAATTCGGTGGAGAGCTGTGCTGGCAACAGCAGCCAGCTGTCTTTGGAAACGATTGCCACAACGCCATAA
Protein Sequence: MRRRTTFATTLPTAPPAPRERSSDNAVDYTLSGAHSSMDIVLEEMTIWMLNINRDDGLPQEICRQCMAQFLMVAKFRRKCVRMQQRLQDFAQEISDRQTARQAKQRHQQKVQKKSQDSEEASTSTATTFSSSRAPVRKRRMVSESDTTGESASQAVVAVKQVRTEAGDLLLPPPKPSPVPLRLRKYRTYSIGCEMERPSTIDASSMPWKTKAARKQLSETWSSSCSPEPSRQNSSSTSSSSEHTSDLSVGPCCGFESDSNPTSSSSSSTSNSATKSLAISGRVKSPKATPSSPVNDLLPRRGRRPRNAPIYHPPKRQRRSLVKREPVKRKIVADEPEVTAENRKSEQKDIFPKEPKVENNSAASSSCDEAIDSTSDVPKEVPTNVDQDPVNNTILVEKEKEITSNGLIESSNQENSMNMESDNEQITFYEVEQNVSQKLEEVELPKTESNGISVPCTDQHDAEILANELLEQFEATSVIKSTFPSDDPCIKQDIESILNVIEAEADLVQSKELTSSTETSELPAEIVEQQLEVVELLETETTGVQQEAAEQPEIIVSIPLEALDENLQRRLCPDAENEESAAPKDLPLQSSDDVNNNENDENFCQSATAGSFNSAVALRINKIEATPPGGGTGTESDGTEDDTNEVQAVRSGPTPMDFMAEFAKHCANGIEELKATTPAESPTPSELLPFNDLDAKQKLEVEMNDVETTLNGILNEMQDQHMYTPSCDEFLTPADYAPMTEQETPISSPPPNPFEQQSPVAVEAEPKPSATDDPFDNSNFSNELIGFQNDIPCFENIEATAEQGQNLHLELTQFLRDLQPAQTLQPSSEEQVAETNQATVQMDAVQANLPVQPADIQPQNESTEHSPNESPISSPQVQNQMEISMEPEIDTQMQQHEILRVHTPHNQPEVQSHDQSQMQHRIPPQIEPQIQVQSHEPQTLQIVPQVQRQVLPQQVHPQLQLQSPTAAARVPHVQTQGTTTTVTYEQYYQQHIVQQTVQQSSNKMQIISLPAGGSETRQWQTQQSSQQQQQLQWSSVGGLEAIKSAPVERVAPTTTTYYISARELQPAIGETYTMLQPTANDRYMLERVNHHQQQQQQQQHHQQQQQQRHQQQILLARQQHHQAQQQPIMILIQKPDTQRPVASASNPQQAPMLVHPLQNAQRQQIRQHIQRHQLEQQQKQQQQQQQSRLVQSHPVLGMPGATSISTKVNPIPATTPRGRALTLKCRFCQNGPRFSSSVEYSKHIIDLHPAVAPFNCPHCPLAFAGRTKRSQHILSEHVVQQYQCGQCSQVFPAQKALDIHIQRFHIQLKTSPPGAVQVEDVQLQITNDRRRGRPYKPRLQQQQHQLHPQQQQLAQQQEAQQQQQQAQQLQQQQAQQLQQLQPQQQQQQQQVQQQQQQQQQQHVLQVQQPQQQPLMQPQSPHPSTMEIQASPTTPRKILCCPDCEDCTSGHSHGNDNDSEQCEEQLAAAAATLQAPPTVLTPPSTIVSAASPQPSMMYSQHITMPSPEQSEPDSTTTLRQFRKRGVIVGPQGPLHLATPVASPSPSSSPSSSTVDHAPPASPAPPASPAPPPSPATPTVQVQVNELRTCHQCLYCEERFTNEISLKKHHQLAHGAQTTMPFVCGICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHIKFHGELGYQCDGCDRTFEYLKELRKHRRTHSEMFHKCKFCPSSFKRFTSCRAHMKTHLPMTVFRNEEAAAAAAASKSPSNNSSSSSSSDKLENPPTPIEETPLTPMSSSGGHVYSSPDEYPNSVESCAGNSSQLSLETIATTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00578834;
90% Identity: -
80% Identity: -