Basic Information

Gene Symbol
Hivep2
Assembly
GCA_037075245.1
Location
JBAMCH010000014.1:28241840-28249826[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00077 0.059 14.0 0.4 1 23 422 444 422 444 0.98
2 8 0.00032 0.024 15.2 2.9 1 21 450 470 450 474 0.89
3 8 0.028 2.2 9.1 0.1 1 19 1059 1077 1059 1080 0.93
4 8 2.8e-06 0.00022 21.7 2.0 1 23 1776 1798 1776 1798 0.99
5 8 1.2e-05 0.00092 19.7 5.3 1 23 1804 1828 1804 1828 0.92
6 8 0.00013 0.01 16.4 2.7 2 23 2286 2307 2286 2307 0.97
7 8 0.00082 0.063 13.9 1.2 1 23 2313 2337 2313 2337 0.91
8 8 0.0026 0.2 12.3 2.7 1 23 2358 2382 2358 2382 0.92

Sequence Information

Coding Sequence
atggaaaatgcaacAACCACAACGGCCAAGCATTACAAAACCGCAGGCAAACAGTACAAGACCAATAAAGTGAACAATACGCGACgtgccacagcagcagcagcggcggcagcagcagcagcagcagcaacaacaaccacaacagtaacagcagcagcaacagcaacatcaaccaAGAAGCAGACATATCGGgaaactgcaacagcaaccacAGTCACTAAGAGAACAAGCAACAAAGCCAActtagcagcagcaacagaagcaacatcagcaacagcagcagcagcggcagcaacagatGTTGCTGGTGGCATCAGCAATActaacagcaacagcaaaccCAGTACAAGCTCACGAGATAAACTAAGCGAGTTGCCGCTGCCGAGTgttgacaacaacaaccaccacatcatcagcaacaacaacaacaataatacaaatacaaataataataacaacaacaaccaccacaGTGATAATAGTATTAGTGAgaataattatgaatttaagTGTAGAGATAAAGCAAGTCTAAGTGATAGCAAAATGACGCTACAACAGATGGCAGCAGTCAGCAGCAACCACCAGGAGCCAGTGGCTCCGAATGTGGCCAACACAGGCAGCCAGCAGACAGCCGTAAATGCCACACCCACACCCGCCACCGATGAGGCTCCGTTGGGGGATTGGTCAAATATTTCACGCTATCTGCACAAGAAGTTCAAACGTTTGGCCAGCACCACCGAGGTGGAGAGCGGGAATGCGACGAATGGTGGTGTTACTGGTGCACATCATCCAAGTAGCGATGCTGCCGTTCGCACCACATCGCTGTCCTCAAACAGTTCGCTatccccaccaccaccaacgcCGCTGGCCAATGGTCACCAGACCCACCATCTGATGATGACCCAACAGCAAAACCACCAACAGCaagtgcagcaacagcagcagcagcagcaacatcaacagccgCCGCCAGCAGCCACACATGAATTCAGTGCCAATTTTGTAAATAGCAATCATGTCAATGCCATCGGTCATGAGGAGAGTCTCGTTATCAGCAGCAATAGTGGCTACAAGGCGGCGGCAAGAACGCGAACGCCACTCAGTAATAGCAATACGAACAGCAACAGTAACTATGCGGCAAATGCCACACTGTCACCGGCCACATTTGCCCAGCATCAACAGGTTACACAGCCAACAACGGCGAGTCCGGGCATCCCAGGCGGAGCTGCCGCACCGAATGCCGCGGGAGAAAAGTCCGGACGATATGTGTGCACCTACTGCAATCTGATCTGTGCCAAGCCCTCGGTGCTGGAGAAGCACATACGGGCCCACACCAACGAGCGACCCTATCCGTGCGACACCTGCGGCATTGCCTTCAAGACGAAGAGCAATTTGTACAAGCACTGCCGCTCCAGGTCGCATGCGGCCAGAGCTCGGGGCCTGGAGGTGCCAGCCGATGCGGACGATGGTTTGTCCGATCAGGATGCCGAGCTGAGCAACAGCAGTTCGGAGTTGCCGAGTCGCGCTGGATCGCCCTACGATGAGCCCACAAATTCGCCCACACCCTCGCCTTCCACACTGTCAGCGGCCAAGAGTGCATACATTCAACAGCCACCTCTCCCTCAGCACATGCAACAGCTACCGCTAGGCTCGCCGGCTGCAGGAACATTACCACCCACCACGGCGGATAATCTCCACTCGGCGACTGCCCAGCATCGGTCGTCCATCGACTACAAGCCATATAAACCCAAGTTCCATAATGCAGCGTTGTATGTACCACCCGGTGGTAGCAAGgaggcacagcagcaacagttgcagattcagcagcagcagcagcagcaacatcaaatGGCCCAGCAAAAGCTATCCATTCAGTTGCCTTTGGTGCAGCAGCCATCGCTGGCACATCCCACGCTCTCGCCCAGCACGCAGATGAAGATGAAGCACCACATAAACTCGCATCAAATGCAGatgcaaatgcagcagcagcagcaatctcTGTTGGCGCAGCAATCGCTGTTGGCCGCCATGCCGGTGCCACCTGGTGGGGTTTATTACCTGGGTCAACCGTACTACAACCAAGATGCAGCGGCGGCCGCCATTCATCAGCATGCTCTGGTCATTCAACAGTTTCAGCTGCAACAAATACACctggcacagcagcagcagcaacaacaacaacaacagcagcaacaacaacattcaCCTTTAGTGAAGGCGCCACCAGCAATGCAACAGATTCCAAGTCTGCCGCCTCAACAGCTGGTGCGAGCCAACAGTCAGGTTTCGAATGTAGCAACTGCGCCTTCCACTCCCACGCCCGCCGCCAATCTCAGCAGTTTTGCCAGCTCTAGTGGTGGCATGCAAGTAAATGTGGCCAAAGTACAGGAGCACATTTCCAAGTTGATCTCTCAGAACGAAGCCATTGTGGAGAACAAGGAGATATTGCTGCAGAAGAAATACCCCAAGCAGTTGAGTCGTTCCCGCAGCTTCAAcaatgccaacagcaacaatacaTCGCAACATGGCAGCAACTCTGCGGCAGCATTGCATGCAAACAACAGTCACAACATCAATGCACAGATGCCAGAGCGCGAGACCAAAGTGAATTTGGCACAGGCCATCGtccaaaagcagcagcaacagcagcagcagcaactccagcagcagcaacagcaacaacttatccaacagcagcagctggagcaaCAGAACTACTATACGTacatgcaacagcaacaggagaaccagcagcaacaacagcaactggaACCTCCAAATGGATTGGCTAAAAGGAATACCTATAAGCCTGCGCCGGCGATGACGACACCTgtgaagcagcaacaacaactgccaCCCCCGCCCTCCCCGCTGCCCATGCAAACGATGCAATATCGGCAGGATCCTGCAACGTCAGTGCCCAAAACCGAGCAACCGGCGACGACAGTGCATGCGATGCCTTTGAACCTGTCAGCGAAACCTAAGCCAACGCTGGTTACAGTCCCAGTAAGTTCCTTGCCCACCAGCTCTGCGGCACCAACGCCTGCGACTCCTGCGGTTAGCAGCTCCAAAGCAGCACCACCCCCCGCCCAGGTGAACAACTCGATCATCAAGAATCTGCTGCTGAATGCTCGGGGATTGGCGGTGCCAATTGGCGAGGGCGATGATGCCGTTTATTCGTGCCCCATCTGCGCCAACGAATTCCGCAGTGCGGACGAACTGAAGCTGCACAACAGCACCTACTGCCAGGATGCGAGCTCTAGTGCCCCAATGAGTCCGGCCTCGTCGCCCTTCCGCTCCAACTCGATCTCGTTAAGTCTGCCGGAGCTGAAGAACCACATGGCCAACTCGAAGAATCCATTATCTCTGGCCAAATTGGCCTTTTCGCAGTTAAATACGAAGAGAAGCAATCTGATATTAAGTCGCCTGAGTGCTGCACAAACGCCAGCGAGAACTTCTACGGTAACAGCACCTACTGCGACTGCTCCTGCCACCTCACCTGCACCAGCTACAGTTCCTGCTCCATCAGCAgctcctgcagctcctcctcaAATTGAAGCCCTGCGCTTTGTGGATGCACCACTGCCATCGCCAGGCCCGCTACTGGGTAAAACACCCCTGGTGGACTATGCCCAGCAAAATGCACCGCGCAAGGCGCAGGATTCGGTGGTTATAACCAAAATGCACGAGGATAGACAGTTTGCAGTGCGTGATCTTGAAGCTCAGCCCGCCAAGCGTATCAGGACTAGCGACATGGTAGTGGCTTCCTCCTCCCAGCAAACGACAAGTTTTAACTTTTCGTTTAACAACCAGAATAACAATAATAGTGTACCGGAGCTGCAATCCTCTAAGGAGGAGCGTCTGCGCAGATTCACCTCCTCGGGGGGCAGCATGATTCCGATTTCGGAGTGCCCTGATATGGACAACAGTCCCAAGATGATTCGAACTCCCTTGCTGTCCGGCGGTAGCTTCCAGGACGTTTCCGTCAAAGGAAACAACAGCGAAACAGGATCATCGAGCAAGGAGCGCAAGCTGATGGCACTGGCCAGTAGCAGTGGACTGCTTGGCGTTAGCTCAGGACCGCAGCACTTTCAGTTTCCACCCATTAATTCGATAACTGCCTTCAATCCGCTAACGCTGCCACCGATGAGCGGTGGAGATAAGAGCACTCCGGTCACACCGATTCCTCATGTGCCTGGAATGCCGGGACCGGGTAGCTTAACGCCACAGATGCCACTGTTACCGCCGCCACCGCAGCAGCTTCAGTTGCCCATTCCCACGGGCCGCGGACGTAGTCCAAACCGAAAGCAACCCAGTCCTCTTCTCTTGGGAGGCGCCGCAGCTAGTGAACTAAAGGCTCTATCGCCATTCGGTGGAGTTCAGAATGTGCCAAGCGAATTTAGCCGACAGCCGCCAACTCCTGCTCAACGGCAAGCTCTACAATGGAACAGCGGCAAGGAGACACCAAAGAAGGCGCCATTTAACTTTCTGCGCATGGCTGATAATGTGAAGACCACGGAACCTGAAGTGCGTCACTTCAATCTGGAAAATGTGATTGCCGGGAAACAGCAGGAGTTGCCTCTAACACCCCTGCATGTGGAGACTCCGAATGGAAACAATACCGAGGAAACCAATCCCGTTGCCAGTTCCTCGTCATCGGCCAAATCAAAGTTCCTGCGACCCACTAGCTTGCCACTGAAACCCGGGACCTTTACGCCCAAACGCCATCACGGCATTACACCTACAGCCAATACATTGCCGCTGATCTCGCCAGAGACCCCCAGGCCGTCCAAATCCTGTGTGCAACTGTATCTCAATGGACACGCCTACACCTATCTGGGTCTCAAATGCAGCACAAAGATGTTCTACTGTACGGTGAATTGCCCGCAACCTTCGTATGTCGCCGGAATGCACAAACTATCGATGTACAGTGTGTGGCAGGTGTGCGAGGAGAACCAGCCGCATCCACTTGGGTTCAAACTTAAGCAAGTTATGGCTCTCTATGACTCTCGGCAAAGGATGCTGGGAAATGATAGCTCTACCGCGATGGCTGGATCTGGAAAGCTAAGCTACAATCTGGTGGCCTCCCAGCAAGCAATTTGCTCCACTTCGACGTCGTCTAGTAGCAGTGCTTTTTATCAAGGGCCCCTGAAGACGCCACCAACTGTTCAGGTTGCCGCCCTCAGCGAGGCGAATGTGGCGGCAAAGGCGAACGAGGAGGCGCAGGCCAAGAAGCTGGAGACAAGTCCGTCCGGACAGCCCCTGGTGGGTGGCTATGAGTCGCACGAGGATTACACCTACATCCGGGGCCGAGGAAGGGGCAGATATGTTTGCTCCGAGTGCGGCATTCGGTGCAAGAAGCCATCGATGCTTAAGAAGCATATTCGCACCCACACGGATGTGAGGCCATTCACCTGCAGCCACTGCAATTTCAGCTTTAAAACCAAGGGCAATCTGACCAAGCACATGCAATCAAAGACTCACTTCAAGAAGTGCATTGAACTGGGCATCAATCCGGGACCAATGCCACCTGATAGCGAGTTCCTGGACGTGGATATGGACTTTGATCAGCAGTCGTCCACTTCAGCGGGAGGACGCACGTCTTCCATGGCAGGAGAATCTGATTCAGATGACTATAGTGACAATGAATCGGAAAGTAGTGATACGGATGAATCCAAGTCTCGATTAAAAGAACACGAAGCAGCGAGGGGCCTACTGTCGCTATCAATGACGCCGCCCATTCCGCCGAGCGTGTCGCCCTATTCACAGCTGCATGATACACCCCTTCCGGCAGCAAGTCCTGCCAACAGTATTGGCTCATCGGGTTCGCAGCCCAAGAGACTGGTGTGCTCCTTTACATCTCCCAAGCCACCGTTCGACTATCAAAAGCAGGAACAGTATTACTCCAATCCCGAGGAGTCGAAGCCTAAACGCAGCGGTGCCAGTGAGGAGAGTGCCCCCATGGATCTGACAAAACCACGTGGATCCATGTCCGCAATCTCTCCGTCGCCAGTTCCGACGCCCGGCCAGGATCTTCCCAAATCGCAGGCTCAGCAGATGCACGATGTGATCTTCGGCAGCTCTGGCAACGAAAGTGGCTTCATGAAGACCCTAATCTCGGTGTCGGACAAGGTGCGCATATCCGCCGAAATGGAGGAGCAGGCCAAGCACGAGGCGGAGGGTGAGGATGTTCAACTGCAGACCTACATCAAGGAGCATGCGCTGCACCAGGCCAAGATAAAGCAGAGTCAGTTTAGCCGCAGCTATCTAATCAATACGTTGTACTCTGCGGCGTCTCCCGtaatgagcagcagcagtagcacaCTATTTACCACCAACAGTCGTCCCGTAATGAGCATAAGTGAGGTTCCTAGCATTGAAGTCCACGAAGTGAAAACTCCAGAAGCCGTTGAGCTGCCAACTATTGCGCCTGTACCTGCACCAGTTATACCAACACCAATGCCAGCTAAGATTGCCCAGGAAGATCACGAGGAGAATGATACACAATCGGATCAGGAGAAGCCCAAGGTTGTGGTGCCACATAATGCCAATCTGCCTGCTGCAGTGCAGCAACCGGATGCCAATGATTTTAGTGGAGTCCTTGGAaatccgccgccgccaccaccaacAACATCCTCTGTGGCTGCTGTAGCAACCACATCGACAACTACTTCTGTGGCATCTTCAACCAGCGTCAGCGTCAGCGCCAGCTCAGCTCAGCCCACCCAGAGAACAGTGATCGTGGGCGAAGATGGTTTCAAGAACTCCACGCCCAACAGCAAGAGCAGCGATCTGCAGCATGTATCCTACGGCAGGGGAGTGCCACCAGCTCCCATTGCTGGCGATGCGCGACCCACCTGTACCATTTGCGCCAAGACGTTCCAGCGGCAACATCAGCTTACTCTGCACATGAACATTCACTACATGGAGCGCAAGTTCAAGTGCGAGCCGTGCAGCATATCCTTCCGCACGCAGGGACATCTGCAGAAGCACGAGCGATCGGAGGCGCACAAAAACAAGGTTATGATGACATCGACGTTTGGTGTTCCAACCACCTCCAATCCACGCCCCTTCGAATGCACCGACTGCAAGATCGCCTTTCGCATCCACGGGCATTTGGCCAAGCACTTACGCTCCAAGACGCACGTACAGAAGCTGGAGTGCCTGCAGAAGCTGCCGTTTGGAACCTATGCTGAAATCGAACGAGCCGGGATTAGTCTCACTGAAATTGATACAAGCGACTGTGAGAATTCGCTAATATCATTAAAGTTGCTGGCCCAGAAACTGCTGGAGAAGGATCCAAGCAAACTAAGTAGCTACACTACACCGTCTGGCATGATGCAACTGGCCCAGGATGGAACAGGTCCTGTTTCCCAGGATAGTGCGTCTGAAGATGGGTTTAGTGCCGTCATTGCCTCGGCGATAGCTTCGCTGGACAACGACAGTGCTGGCAACACACCCAAGCGTGCCAGCTCCATGTCCGAGGATGAAACGGTGGCCAATGGCTTGAACCATAGCCTGAAGCGTCGTTTGCCAGGCAGTTTCAGCAGCACAGGCGAGGAGAGCGATAATCCGGCCGAGGGCAGTGGCGAGAAGCGGGCTCGTTCTGGCCAGGATCTGCCTGTTCCGGTGCCGGTTCCCGTGGCTGCTTCGGCGGCGGCAAGCAACTGA
Protein Sequence
MENATTTTAKHYKTAGKQYKTNKVNNTRRATAAAAAAAAAAAATTTTTVTAAATATSTKKQTYRETATATTVTKRTSNKANLAAATEATSATAAAAAATDVAGGISNTNSNSKPSTSSRDKLSELPLPSVDNNNHHIISNNNNNNTNTNNNNNNNHHSDNSISENNYEFKCRDKASLSDSKMTLQQMAAVSSNHQEPVAPNVANTGSQQTAVNATPTPATDEAPLGDWSNISRYLHKKFKRLASTTEVESGNATNGGVTGAHHPSSDAAVRTTSLSSNSSLSPPPPTPLANGHQTHHLMMTQQQNHQQQVQQQQQQQQHQQPPPAATHEFSANFVNSNHVNAIGHEESLVISSNSGYKAAARTRTPLSNSNTNSNSNYAANATLSPATFAQHQQVTQPTTASPGIPGGAAAPNAAGEKSGRYVCTYCNLICAKPSVLEKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARARGLEVPADADDGLSDQDAELSNSSSELPSRAGSPYDEPTNSPTPSPSTLSAAKSAYIQQPPLPQHMQQLPLGSPAAGTLPPTTADNLHSATAQHRSSIDYKPYKPKFHNAALYVPPGGSKEAQQQQLQIQQQQQQQHQMAQQKLSIQLPLVQQPSLAHPTLSPSTQMKMKHHINSHQMQMQMQQQQQSLLAQQSLLAAMPVPPGGVYYLGQPYYNQDAAAAAIHQHALVIQQFQLQQIHLAQQQQQQQQQQQQQQHSPLVKAPPAMQQIPSLPPQQLVRANSQVSNVATAPSTPTPAANLSSFASSSGGMQVNVAKVQEHISKLISQNEAIVENKEILLQKKYPKQLSRSRSFNNANSNNTSQHGSNSAAALHANNSHNINAQMPERETKVNLAQAIVQKQQQQQQQQLQQQQQQQLIQQQQLEQQNYYTYMQQQQENQQQQQQLEPPNGLAKRNTYKPAPAMTTPVKQQQQLPPPPSPLPMQTMQYRQDPATSVPKTEQPATTVHAMPLNLSAKPKPTLVTVPVSSLPTSSAAPTPATPAVSSSKAAPPPAQVNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKLHNSTYCQDASSSAPMSPASSPFRSNSISLSLPELKNHMANSKNPLSLAKLAFSQLNTKRSNLILSRLSAAQTPARTSTVTAPTATAPATSPAPATVPAPSAAPAAPPQIEALRFVDAPLPSPGPLLGKTPLVDYAQQNAPRKAQDSVVITKMHEDRQFAVRDLEAQPAKRIRTSDMVVASSSQQTTSFNFSFNNQNNNNSVPELQSSKEERLRRFTSSGGSMIPISECPDMDNSPKMIRTPLLSGGSFQDVSVKGNNSETGSSSKERKLMALASSSGLLGVSSGPQHFQFPPINSITAFNPLTLPPMSGGDKSTPVTPIPHVPGMPGPGSLTPQMPLLPPPPQQLQLPIPTGRGRSPNRKQPSPLLLGGAAASELKALSPFGGVQNVPSEFSRQPPTPAQRQALQWNSGKETPKKAPFNFLRMADNVKTTEPEVRHFNLENVIAGKQQELPLTPLHVETPNGNNTEETNPVASSSSSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNDSSTAMAGSGKLSYNLVASQQAICSTSTSSSSSAFYQGPLKTPPTVQVAALSEANVAAKANEEAQAKKLETSPSGQPLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPPDSEFLDVDMDFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPPSVSPYSQLHDTPLPAASPANSIGSSGSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKRSGASEESAPMDLTKPRGSMSAISPSPVPTPGQDLPKSQAQQMHDVIFGSSGNESGFMKTLISVSDKVRISAEMEEQAKHEAEGEDVQLQTYIKEHALHQAKIKQSQFSRSYLINTLYSAASPVMSSSSSTLFTTNSRPVMSISEVPSIEVHEVKTPEAVELPTIAPVPAPVIPTPMPAKIAQEDHEENDTQSDQEKPKVVVPHNANLPAAVQQPDANDFSGVLGNPPPPPPTTSSVAAVATTSTTTSVASSTSVSVSASSAQPTQRTVIVGEDGFKNSTPNSKSSDLQHVSYGRGVPPAPIAGDARPTCTICAKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPSKLSSYTTPSGMMQLAQDGTGPVSQDSASEDGFSAVIASAIASLDNDSAGNTPKRASSMSEDETVANGLNHSLKRRLPGSFSSTGEESDNPAEGSGEKRARSGQDLPVPVPVPVAASAAASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00592606;
90% Identity
iTF_00578781;
80% Identity
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