Basic Information

Insect: Drosophila mimetica
Gene Symbol: -
Assembly: GCA_037075245.1
Location: JBAMCH010000007.1:23145675-23147807[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1 79 4.2 2.2 2 23 55 77 54 77 0.89

2 10 4.6e-06 0.00036 21.0 0.6 1 23 257 279 257 279 0.99

3 10 6.6e-07 5.1e-05 23.7 2.0 1 23 285 307 285 307 0.99

4 10 1.6e-08 1.2e-06 28.7 0.5 1 23 313 335 313 335 0.99

5 10 8.3e-06 0.00064 20.2 1.5 1 23 341 363 341 363 0.98

6 10 0.00022 0.017 15.7 0.0 1 23 370 392 370 392 0.97

7 10 2.6e-05 0.002 18.6 0.2 1 23 398 420 398 420 0.98

8 10 6e-08 4.6e-06 26.9 0.7 1 23 426 448 426 448 0.98

9 10 9.7e-08 7.5e-06 26.3 2.8 1 23 454 476 454 476 0.99

10 10 4.5e-08 3.5e-06 27.3 0.1 1 23 482 504 482 504 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1	79	4.2	2.2	2	23	55	77	54	77	0.89
2	10	4.6e-06	0.00036	21.0	0.6	1	23	257	279	257	279	0.99
3	10	6.6e-07	5.1e-05	23.7	2.0	1	23	285	307	285	307	0.99
4	10	1.6e-08	1.2e-06	28.7	0.5	1	23	313	335	313	335	0.99
5	10	8.3e-06	0.00064	20.2	1.5	1	23	341	363	341	363	0.98
6	10	0.00022	0.017	15.7	0.0	1	23	370	392	370	392	0.97
7	10	2.6e-05	0.002	18.6	0.2	1	23	398	420	398	420	0.98
8	10	6e-08	4.6e-06	26.9	0.7	1	23	426	448	426	448	0.98
9	10	9.7e-08	7.5e-06	26.3	2.8	1	23	454	476	454	476	0.99
10	10	4.5e-08	3.5e-06	27.3	0.1	1	23	482	504	482	504	0.97

Sequence Information

Coding Sequence: ATGGCCGTGCAGCTGAAGCAGAGCTACCACCACCTGCCCCTGACGATCACCCCGATCCTGCATCCTACATCCCACattctgcagcagcagcaggcggctcTGCCCAATCCCCTCCAGCCGGCACCCAATCCTCCCCAGCCGCAGCCGCCGGATCTCACCTTCCACTGCATGTGCTGTGCCGAGTTCTTCGTCCAGCCGCTGGCGCTCTACCAGCACATGAACACCCTGCACCCGAACGAGCATCCCAgtgagcagcaggagcaggagaatCCGGGCGACGAGGCCGAGGACTACAGCTGGATCTTCGAGCCCGTGTGCGAGCTGGCGGAGGACGGCAGCGACTCCTCGGAGGGCAGTGATTCCTCTGGCTCCgacagctcctcctcctcggacgacgacgacgacgacgacagcagctccagctcgagttccagcaacagcagttcATCCAGCAGCTCGGTGCCGACGTCCAGCAACTCGAACACCCAGCAGAGCCAGGAATCCTTGCAGCCCATGCGCGGCTTGGTGGCCGGGCCGGGCTACAACGAGTACCAGCTCCAGGTGGCCGATCCCCGGGAGTCGACCTCCATCTTCATGCTGCAACCGCCGGCCATGGGACTTGCGCCACTGGCACAGCTGGCACCACCTTTGCCCACTGCTGCCCTGGGATTCTTCCTGGACTCGGCGCCCATCAAGCGGCGGCGCGGAAGGCGGAGCAACTTTAATGCCCCAGCGATGGATCCGGCAGTGAGTGGCAACCAGAAGTGCTTCCAGTGCACCCACTGCGAGGCCAGCTTTCCCAACGCCGGCGACCTGTCCAAGCACGTGCGCTCGCACATCACCAACAAGCCGTTCCAGTGCTCCATCTGCCAGAAGACCTTCACGCACATCGGCAGCCTGAACACGCACATCCGGATCCACAGCGGCGAGAAGCCGTACAAGTGCGAGCTCTGCCCGAAGGCCTTCACGCAGTCCAGCAGCCTGATGGTGCACATGCGCTCCCATTCGGTGCGCAAGCCGCATCAGTGCGTGGAGTGCGACAAGGGATTCATCAACTACtcatcgctgctgctgcaccagaAGACGCATTCGGCGCCCACGGAGACTTTCGCGTGTCCGGAGTGCGAGCGGGAGTTCAAGGCGGAGGCGCTGCTCGACGAGCACATGCGAATGCACACGCAGGAGCTGGTGTACCAGTGCGCCATCTGCCGCGAGGCCTTCCGCGCCAGCTCGGAGCTGGTGCAGCACATGAAGAACCACATGGGCGAGAAGCCGTTCACCTGCTCCCTGTGCGACCGCTCCTTCACGCAGTCGGGCAGCCTCAACATCCACATGCGCATCCACACCGGCGAGAAGCCATTCCAGTGCAAGCTCTGCGACAAGTGCTTCACCCAGGCCTCCAGTCTGAGTGTCCACATGAAGATCCACGCTGGCGAGAAGCCCTATCCGTGTCCCATCTGCGGCAAGTCCTACAGCCAGCAGGCGTACCTCAACAAGCACATTCAGGCGCATCAGGTGGCTGCTGCTTCCTCGTCTCCTGGACTGCAAATCACCAAGCAGCCGCACGAGACGCTGGTCTGCATAGTCTGCGGCTCGCTGCACGCGGATGCCACGGCACTGGCGAGTCATGTGACCAGTAAACATGCAGCGCTCCTGGACACCATGAAGCAGTCGGCGATGAACACGCCACCGGGAGGAGCGCATCCGGAGGGCAAGTGTACGCTAGAGGAGCAGCAGGCCTATATGCAGCGGGTCCAGACCGTCTTGCAACAGAtgaaccagcagcagcaacagcagcaaatgcCGCTCCCGCAGCAGGCCAAGTTGCCAGCCATGGATTCCACCGGCGAAGACGAGGAGGAACCCGATGAAGCGGAGGAACCTcccgacgaggaggaggaggaagaagaCGAGCGAGGGGAGACTCCCGAGGAGGAGGCTGAGGTGCACGAAGCAGAGGAATCGCTCATCAACCAGAGTTATCCCATGCTCGGTCTGCAGGAGGAGCAGATCCTGCTGGACTCCGACATGTATTACGACGATTTTGCCGACATGGACGTCGGCTGCCAGGAGGAGGTGTTTGGCGACTTTGCCGTCAACGAGGAGGAGGTCTACACCGATGCGCTCATGTAG
Protein Sequence: MAVQLKQSYHHLPLTITPILHPTSHILQQQQAALPNPLQPAPNPPQPQPPDLTFHCMCCAEFFVQPLALYQHMNTLHPNEHPSEQQEQENPGDEAEDYSWIFEPVCELAEDGSDSSEGSDSSGSDSSSSSDDDDDDDSSSSSSSSNSSSSSSSVPTSSNSNTQQSQESLQPMRGLVAGPGYNEYQLQVADPRESTSIFMLQPPAMGLAPLAQLAPPLPTAALGFFLDSAPIKRRRGRRSNFNAPAMDPAVSGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVECDKGFINYSSLLLHQKTHSAPTETFACPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQVAAASSSPGLQITKQPHETLVCIVCGSLHADATALASHVTSKHAALLDTMKQSAMNTPPGGAHPEGKCTLEEQQAYMQRVQTVLQQMNQQQQQQQMPLPQQAKLPAMDSTGEDEEEPDEAEEPPDEEEEEEDERGETPEEEAEVHEAEESLINQSYPMLGLQEEQILLDSDMYYDDFADMDVGCQEEVFGDFAVNEEEVYTDALM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00619279;
90% Identity: iTF_00605713;
80% Identity: -