Dmim002988.2
Basic Information
- Insect
- Drosophila mimetica
- Gene Symbol
- ttk
- Assembly
- GCA_037075245.1
- Location
- JBAMCH010000004.1:27225414-27229023[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-19 1e-15 57.3 0.0 2 45 572 616 571 616 0.97
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAGTTCTGCCTGCGGTGGAACAACCACCAGCCGAACTTCATCTCGGTGTGCTCCTCGCTGCTGCACAATGGCACCCTGGTGGACGTCACCCTGGCCGCCGAGGGACGCCAGCTGCAGGCCCACAAAATAGTGCTGTCCGCCTGCAGCTCGTACTTTCAGGCTTTGTTCACCACAAATCCGTGCCAACATCCCATTGTCATCCTGAAGGACGTGCAGTACGATGACCTCAAGACCATGGTGGACTTTATGTACTACGGCGAGGTGAATGTGtcgcaggagcagctgccgcACATCCTCAAGACCGCCGAGATGCTCAAGATCAAGGGGCTGGCGGAGATGCCCACGGATCCGGCCAACCTAACCAAGTCGGACAGCAAGTCCTCCACCGATGGCACCGAACTGGTGGGCGGCTCGGGTGTGGGCACTGGAGCGGGCACTTCGGCTGGCAGCTTGGGTGCCGCCAGTGGCAGCAGTGTGGGCGATTCGCTGTGGAGCAGCAGCGAGGCCCAGCAgttccagcagcaacaacaacagcagcaggcacAGCAacaggcgcagcagcagcaccatcaccaccagcaacagcagcagctgcaacagcaacagcaacaggcgcagcagcagcagcaacaacaacagcagcaacaccatcaccaccaccatcagcagcagacGGGCGGACAGGCGCAGGCGGCGCAGACGCATCACCACCAGATGCGACGTACGCCGTCGCCGCTGAGCGCCGGCACCTCGCCGGCCACCAGGCGCAAGCGGCTGCGCAAATCCTCGAATAACGGCTCTGGCGAACGCAACAATGCGGAGGAACAGCACAACAGCTCCCTGGACGCGGGCAGTGGTGCCGGCAATGCCGGTCTCAGTCTCGCCCAGATGAGCCAGATGTCCTTTGGTGCGGGCGGCGGTCTTGCCGGCCACTCACTGCACGCGGCCAAGCTGCTCAAGGAGTCGGCCAGCGCtgagctggagcagcagccgcaggacTCGGATCTGGACGACGGACACGGACACTTACACATGCAAATTAAGCCCGAAGTCGACATTGGCGGCGTGAACCAAACGATGCCACTGGATATCTCTGGCGGCACAACACCATCCGAGCACGATGCGCCGAACTCCCAGTCCTCGCACTCGGGTCTGCAATGGACAGTTGTCGATTCCAACTATCCGCGCTTCTCCCTGCCCGCCTGCCAGTCCAACTTGCTGGGCAACGGCggtggcggcagcggcggtggtggtgccgGCGGCGGCCAGAGCAGTGGTGCGAATAGCGCCGGCGGCGGCGTCAATAGCgaccagcggcagcagcacgAGGCCCAGCAACAGGccacccagcagcagcagcacctgcagcagctgcactaccagcagcagcaacaacagcagcaggagcaggccTCCGCCTCCGGACAGGCGTACTCGTCGCAGATCATCACCGTGAACAACCTAGTCGGCAGCTATGCGACGGCCGCGCAGAACCTCTCGCCCACCTCGCCCAACGAGTCCAACATGGTGCAATCGGTCTACAGTCAGGGCCCGACACCCACCCAATCCCCGGTGCATGCGGGCGTTGGCGGAGCCAATGCAGCCGGCGGTGGAGCGGGCAATGCCAATGCTGGAAACGGTGGAGCGACCGGGGCGGCCAATCAGGTGGTGAAGCGCAAGAGATCTGTAAATCCGCAGGGAGATGAGAACTTTATCCGTGCTTTGGAGGCGGTGCGCACGGGAGGCATTGGATTCTGCAAGGCAGCACGACTGTACGGAGTGAACAACAGGACCCTGTGGCTGGAGTACAAGAAGCGGGGCTACCCCGTGTCGCGGCCGAGTATCAAGGCGCGCGTGGTCAAGCAGGAACCAAATCTGTCGCCCTCACCCACGCCATCGACGAATCAAGGTGATGATAATACCAACGAGACGCTGAGCATGCAGATACCACCACAGGCGGAGACTCCGACGCCGTCGCTCATGTGCACTCCGCACCACGCGGGCCTGGGAAGCGGAGCTGGAAGTCTGCCGGGCGGAGGAAACTCCCATCCGGCCATCGGGGTGATGAGCCTGTTCGATCCGCGATACATGGATTCCCCTGGCAATGTGCACTCGATGACGCGGCAACGGTATATCGAAGCCACCGGCGGAGGAGCGGGTGCAGGAACGGGCGCAGGTACCGGCACCATCAACGTCAATCCGGCCACCGCCATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSTDGTELVGGSGVGTGAGTSAGSLGAASGSSVGDSLWSSSEAQQFQQQQQQQQAQQQAQQQHHHHQQQQQLQQQQQQAQQQQQQQQQQHHHHHHQQQTGGQAQAAQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNAEEQHNSSLDAGSGAGNAGLSLAQMSQMSFGAGGGLAGHSLHAAKLLKESASAELEQQPQDSDLDDGHGHLHMQIKPEVDIGGVNQTMPLDISGGTTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSLPACQSNLLGNGGGGSGGGGAGGGQSSGANSAGGGVNSDQRQQHEAQQQATQQQQHLQQLHYQQQQQQQQEQASASGQAYSSQIITVNNLVGSYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGVGGANAAGGGAGNANAGNGGATGAANQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNQGDDNTNETLSMQIPPQAETPTPSLMCTPHHAGLGSGAGSLPGGGNSHPAIGVMSLFDPRYMDSPGNVHSMTRQRYIEATGGGAGAGTGAGTGTINVNPATAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00477402;
- 90% Identity
- iTF_00602665;
- 80% Identity
- -