Basic Information

Gene Symbol
-
Assembly
GCA_004143905.1
Location
SCDX01002021.1:35050-39884[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00031 0.47 11.0 0.0 53 86 1 26 1 27 0.73
2 11 8.2e-13 1.3e-09 38.5 0.4 1 87 37 110 37 110 0.82
3 11 1e-13 1.6e-10 41.4 0.5 1 64 133 191 133 205 0.74
4 11 3.3e-05 0.05 14.1 0.0 1 58 233 283 233 306 0.82
5 11 6.1e-14 9.3e-11 42.1 1.8 1 86 322 394 322 395 0.82
6 11 2.5e-16 3.9e-13 49.8 0.6 1 86 548 620 548 621 0.83
7 11 9.8e-15 1.5e-11 44.7 1.5 1 86 709 779 709 780 0.82
8 11 1.6e-15 2.5e-12 47.2 3.6 1 86 882 952 882 953 0.85
9 11 1.1e-13 1.8e-10 41.2 0.0 1 87 1033 1103 1033 1103 0.83
10 11 1.5e-08 2.3e-05 24.8 0.4 1 58 1134 1182 1134 1198 0.86
11 11 2.9e-09 4.5e-06 27.1 2.5 18 87 1199 1257 1187 1257 0.76

Sequence Information

Coding Sequence
GTCTGCCAGACGCACTTTGCTCCAGATTGCTTTGACCCGGCGACGGGCGAGCTGAAGGAGGACGCGGTGCCCACGCTGGAGCTGATTCGGACCGTGCCCGAAGTTCGCTGCGTGGCCAACGGCTGTCCGGGCAGAGGGGAGGAGGGGACACGTCGCCGCCTGTTCCGCATGCCGAAGCGCAGCCCGCAGCTGGAGGACTGGTGCCACAATCTGCGGCTGATTTCGGCGTCATTTGGCGACCAGGAGCCGCACGTTTGCGAGCGCCACTTTGAGCCGCACTGCTTTAGCTTGAAAAATGGTTTGCGTAGGGGCGCGCGGCCGACGCTCCATTTGGGTCACGACAATCTGGAGGAGGTGCGGCCCAATCCGGCCAGTTGGGAGGAGGAAGCGCTCGTCTGCTGTGTGCCCCACTGTGGTCGCTCCAAGGACGTGGACGATGTGCAGCTGTTCGCATTTCCCCCAATACGTGCCCAGTTCGCGAAGTGGCTGCACAACGTGCGCCTCGATCCGCACCGGGAACAACTGCAGGGCCTGCGCATCTGCAGCGTGCACTTTGAGCCCAGCTGCCTGGAGAGCGGGCGTCCGCCGTATAGCGCCGTGCCCACACGCCATCTGGGCCACGACGACCTGAACGGCATTTACCAGAACCCCAAGCCGCCGGCCACACAGCTGATGCTGGCCAAGAACCTGATCCAGTGCTGCTATCCGCAGTGCGTGGAGCTTCAGAAGAACTATCAGCGCATCGCCTACGAGCTGCCCCAGCGGGAGGCACTGCGTCAGCTGTGGCTGTCGTACCTGGGCATCGAGGAGCTCGTCGTGGAGACGCCCAAGCTCTGTCCGCTGCACCTGATCGAGCTGTACGAGCACAGCGTCGAACACTTTGAACAGCTGCCCGgcgaggagcagctgctggacgCCAGCTACGAGGCGTCGCGCACCACCCTCCGCATTCGCCTTGTCAGCTGTGCGGTGCCCGGCTGTAAAACGTTGAAGCCGCGCGATCCTCACCATCTGAACGCACTGCCCACGCGCCGGGATATGCTCGAGATGTGGGTGGAGAACCTCCAGCTGGTGTTCACCGAGCAGCAGCGTTACACGTGCAAGGTGTGCGACCGCCACTTTGATCCCGTTTGCCAAACGACGACACGGCGCCGGCTGAAGCCGTGGAGCGTGCCGACGCTGGAGCTGCCGGAGCGGGCACCGGACGCGCCGCCATTGTATACGATTCCAACGGAGGCGGAATTTCAGCGCCTAACCGAACAATTGGCCATCAGGGAGCGGCAACTGGCCGAGAAGGAGCTGCAACTGTCGCTGTCCTCCACTGCAGTCAACCTGGAACCGCAGCAGGACAGCGAGGAGTACACGACCAGTACGGGACCAACAGCAGAGCAGCCGCTGGAAATGAGCCCGCTGGTAGAGCCGAAGcgggacaacaacaatggcgagGTGAACAGCGCACAGCAGCCGCTGGAAATGGGCCCGCTGGAGGTGCTGCTCGAGGTGGGTCGCGTCGTCAAGTGCACCACATACGAGCTAATGAACACAAAGCCAACCATCCACTACGACGAGCAGACCACGCGACGCCCACGCTCCCAGAGCTGCGACTCCGATGAGAGCAGCGACCAGCACAGCGGTCGCTTCTGCTGCGTGCGCGGCTGTGCGACGATGTACAGCGAACTGAGGGGCAGCATCAAGCTGCACATGTTTCCCAGTGCGCCGGATGTGCTGCAGAAGTGGATGCACAATGCCCAGGTGCACGTCGACACCAATGTTCCCTGGCGCTTCCGCATCTGTAGCTTCCATTTTGAGAGCAGCTGCTTTAGCGGCGCGCGGCTGAAACGTGGCGCGATGCCCACGCTGCGACTCGGTCCGCGTCGTCCGGCGCACATCTACGACAACGAGTTCAACgcgcagctggagcagcagcagctggaccaGCTGTCCGACTCGGAGGAGCTCGCCATTGTCGCGGTGGCCagtgagcagcagctgcagcagcagcagcaactgcagcagcaactgcagcaacaacagcagcagcagcgagagctgcagctggcggcgGAGTCGAAGATCAGTTTGCGTCTGCCCTGTCCCGCACCGCCGCGCAAGTCCAGCAAGTTCTGCCAGATCGATGGCTGCTCCAATCATCTGACCAGCGAGGATATGACGCTGCACAAGTTCCCCCATTCGGCGGACCTGTGCGCCAAGTGGCAGCACAATACCCAGGTGCCCTTCAATCCGAGGTACCCCTGGCGGTATCGCATCTGCAGCGCCCACTTTGAGCCCGTCTGCCTGGGCAGCACAAGGCTGATGCATGGCAGCGTGCCCACCCTGCGCTTGGGACGACGGGCGCCGAAACAGCTGTTTGGCAACGATTTTGCGGCTATCAACATGCGGATGGAGAAGGAGAAGAGCAGGGTTGAGCCAGTGAGCCAGTGGGAGCAGCGggagcaggagctggagcATGAGTTTGAAGACGACCGGGAGCAGGAGGATTTGAGCTTGCTGGTGccggagctgcagctgcacgaGGCCGACGAGGAGCCCGAATCCGACAATCATttcaactacaacaacagctggaGCGGCAATCGGGAGAATGGCGCCAGCTACAATCCGGTCAAGTCTGGCTACGACAGGTGCTCCCTGGTGCACTGCCAGCGGCAGCGTTCGCAGCACGGCGTGCACATCTACAAGTTTCCGCGCTCCCGCCAGCTCCAGCAGCGCTGGATGCACAACTTGCGTATCCGATACGACGAGCGCCGGCCCTGGAAGACGATGATATGCAGCGTACACTTTGAGCCGCAGTGCATACGGCTGCGCAAGCTGCGTCCGTGGGCGGTGCCCACCCTCGAGCTGGGCGACAACGTGCCCCAGCAGCTGTTCACCAACGAGcagagccagcagcagcagcaacatatgGAGGCGGGCAGCGAGGGCGACGACTGCGATGTGGAGCTGGAGATGGACAACCGGCTGGAGGAGAAAGACGAGGAGGAGTTCGCTGACGATGCCGACGAAGTGCTGGCCGATCCGTACATCAAGAAGGATCCGCTGCCGTCGGGCCAGCCGCCCTCGTGGAAGATCAAACTGTGCTGCCTGCCCTACTGTCGCAGTCCCCGCGGCGACGGCATCAAGCTCTTCCGGCTGCCCAACAACATCAGCGCCATACGCAAGTGGGAGCAGGCAACGGGGATGCGCTTCTACGAATCGCAGCGGAACACGAAGCTCATCTGCAGCCGGCATTTTGATCCGCTGCTCATTGGCGTGCGCCGGCTCATGTCGAATGCGGTGCCCACGCTCAACCTGGGCCCCAACAGCACGGAGCCGGAAACTGAATCGGAAgcggaaccggaaccggaacccAACCCGGAACCGCCCGCAGCCCGTCCGCAGTGCTGCATAGTCTATTGCCGTCAGGGGCCGAATGTCAAGCTGCACAGGTTTCCCAGCGAACCGATGCTGCTGCATCAGTGGTGCCAGGCACTGGATCTGCCGGAAGTGCAACGCTTTGCGGGCAAACACATCTGTGCCGCACATCTGCCCGCCCACGCGCTGAGCTGCCTCATCTGCGGCGTCGACGATGTGCAGCTGCCCATGCTGGAATTCCCCGAGAATCGCAATCAGCGCGTCAAATGGTGCTACAATCTAAAAATCGAGCCCATACCCAAGTGGGACAACTCAAAACACATCTGCTGCAAGCACTTCGAGAGCCATTGCTTCGTGAAGCCGGGTCGCCCGCTGCCCGATGCGATGCCCACGCTCCACTTGGGACACAGCGATAGCAATATATTCCTCAACGATTATGCCATAGAGAACCGCAAGCTGTTGACCGTCAAGGATGAGCCTCTCGAGTGCGAGGATCTGACGCTGtaa
Protein Sequence
VCQTHFAPDCFDPATGELKEDAVPTLELIRTVPEVRCVANGCPGRGEEGTRRRLFRMPKRSPQLEDWCHNLRLISASFGDQEPHVCERHFEPHCFSLKNGLRRGARPTLHLGHDNLEEVRPNPASWEEEALVCCVPHCGRSKDVDDVQLFAFPPIRAQFAKWLHNVRLDPHREQLQGLRICSVHFEPSCLESGRPPYSAVPTRHLGHDDLNGIYQNPKPPATQLMLAKNLIQCCYPQCVELQKNYQRIAYELPQREALRQLWLSYLGIEELVVETPKLCPLHLIELYEHSVEHFEQLPGEEQLLDASYEASRTTLRIRLVSCAVPGCKTLKPRDPHHLNALPTRRDMLEMWVENLQLVFTEQQRYTCKVCDRHFDPVCQTTTRRRLKPWSVPTLELPERAPDAPPLYTIPTEAEFQRLTEQLAIRERQLAEKELQLSLSSTAVNLEPQQDSEEYTTSTGPTAEQPLEMSPLVEPKRDNNNGEVNSAQQPLEMGPLEVLLEVGRVVKCTTYELMNTKPTIHYDEQTTRRPRSQSCDSDESSDQHSGRFCCVRGCATMYSELRGSIKLHMFPSAPDVLQKWMHNAQVHVDTNVPWRFRICSFHFESSCFSGARLKRGAMPTLRLGPRRPAHIYDNEFNAQLEQQQLDQLSDSEELAIVAVASEQQLQQQQQLQQQLQQQQQQQRELQLAAESKISLRLPCPAPPRKSSKFCQIDGCSNHLTSEDMTLHKFPHSADLCAKWQHNTQVPFNPRYPWRYRICSAHFEPVCLGSTRLMHGSVPTLRLGRRAPKQLFGNDFAAINMRMEKEKSRVEPVSQWEQREQELEHEFEDDREQEDLSLLVPELQLHEADEEPESDNHFNYNNSWSGNRENGASYNPVKSGYDRCSLVHCQRQRSQHGVHIYKFPRSRQLQQRWMHNLRIRYDERRPWKTMICSVHFEPQCIRLRKLRPWAVPTLELGDNVPQQLFTNEQSQQQQQHMEAGSEGDDCDVELEMDNRLEEKDEEEFADDADEVLADPYIKKDPLPSGQPPSWKIKLCCLPYCRSPRGDGIKLFRLPNNISAIRKWEQATGMRFYESQRNTKLICSRHFDPLLIGVRRLMSNAVPTLNLGPNSTEPETESEAEPEPEPNPEPPAARPQCCIVYCRQGPNVKLHRFPSEPMLLHQWCQALDLPEVQRFAGKHICAAHLPAHALSCLICGVDDVQLPMLEFPENRNQRVKWCYNLKIEPIPKWDNSKHICCKHFESHCFVKPGRPLPDAMPTLHLGHSDSNIFLNDYAIENRKLLTVKDEPLECEDLTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-