Basic Information

Gene Symbol
-
Assembly
GCA_004143905.1
Location
SCDX01001872.1:1-10216[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3.8 5.8e+03 -2.1 3.0 49 63 151 169 132 185 0.57
2 20 5.1 7.8e+03 -2.5 0.2 21 70 203 253 183 270 0.50
3 20 3.3e-15 5e-12 46.2 4.3 1 86 387 459 387 460 0.85
4 20 1.9e-15 2.9e-12 47.0 4.6 1 87 487 556 487 556 0.83
5 20 4.6e-16 7e-13 48.9 0.4 1 87 578 650 578 650 0.85
6 20 4.4e-16 6.7e-13 49.0 5.9 1 87 750 820 750 820 0.82
7 20 4.1e-15 6.2e-12 45.9 3.3 1 86 844 915 844 916 0.82
8 20 4e-13 6.1e-10 39.5 0.9 1 87 951 1019 951 1019 0.81
9 20 2.9e-11 4.5e-08 33.5 1.4 1 86 1064 1133 1064 1134 0.77
10 20 8.3e-17 1.3e-13 51.3 0.2 1 86 1161 1230 1161 1231 0.82
11 20 5.7e-13 8.7e-10 39.0 1.2 1 86 1252 1321 1252 1322 0.81
12 20 1.3e-14 2e-11 44.2 1.2 1 86 1349 1420 1349 1421 0.84
13 20 2.7e-13 4.2e-10 40.0 1.8 1 85 1485 1553 1485 1555 0.83
14 20 1.3e-12 2e-09 37.8 0.1 1 87 1578 1647 1578 1647 0.81
15 20 2.4e-14 3.7e-11 43.4 1.0 1 87 1820 1889 1820 1889 0.79
16 20 4.5e-11 7e-08 32.9 0.3 1 62 1949 2006 1948 2023 0.78
17 20 0.00035 0.54 10.8 0.0 1 59 2030 2081 2030 2101 0.77
18 20 4.8e-15 7.3e-12 45.7 1.0 1 86 2119 2188 2119 2189 0.85
19 20 1e-13 1.5e-10 41.4 1.6 1 86 2278 2347 2278 2348 0.84
20 20 2.5e-05 0.038 14.5 0.3 1 43 2383 2421 2383 2427 0.84

Sequence Information

Coding Sequence
ATGGCACCGCCACCAGCACCCGCCGCCAATCGTCACACGCTCGATGCCAGCGGcgaaatgataataaaatCTGAGCCCATTGAGGAACATGCGTTCAAGTCCAATTATATTGATGATAATACGCCCTTTGCCGATTTTAGTAAATTTCCCGAATTCGGCGACGACATGCTGAGTCCCAAGGTGGAGCTAACAGTCAAGGACGTGGCCTATGGCAACCAAAAGAACCCGCTCAGCTATCCGCGGCGCAAGCTGCAAACGGAACGTTCCTCGGAGAGTTTGCCCATCTGCCAGCGTTGCAAGGAGGTGTTCTTCAAGAAGCACATATACCTGCGACATGTGGCCGAGAGCAACTGCAGCATACACGAGTACGAGTTCAAGTGCAACATCTGTCCGATGTCCTTCACGGGCATCGAGGAGCTGCAGAAGCACAAGCAGCTCCATCGAGCCGACAAGTTCTTCTGCCACAAATATTGTGGCAAGCACTTTGATACAATTGCCGAGTGCGAGTCGCATGAGTACATGCAGCACGAATACGACAGCTTTGTGTGCAACATGTGCTCGATGACATTTGCGACGCGGGAACAGATCTACGCCCATCTGCCGCAGCACAAGTTCCAGCAGCGCTACGACTGCCCCATCTGCCGATTGTGGTACCAAACGGCGCTAGAGCTGCACGAGCATCGACTGGCGGCGCCCTACTTCTGTGGCAAGTATTATGCAGCTGCCcatcagccgcagcagcagcagcaacaacagcaacagcaacaacagcagcagcagcagcaacaacaacaacatccacAGCACACGCAGGGCAACTACAAGCTGCAGGACTGCCACATGGGCACCATTGAAAtGACACCGTCGCACCACAAGACGAACGCTCTGCCGGCAACGGCGGCGCTCAGTtcactgctgcagcagcgccaggcGAATGCCGATGGAGCCGCCTTGTACGCCTCGGCGATGAAGAGCGAGGCGAATGTGAAGCTGGAGCGCAGCTACAGCAACTCCACCAGCGAGTCCGGCTACAGTCTGCACGAGAGCAGCAGCTATAACAATGCCTACGGCAGCGACAATTCACTCCATGGCAGCGGCGCCGCAATTGGTGGTCCGCAGGCGCACTCCTCCACGCTGGACGAATCGGAGGATGCGCTCTGCTGTGTGCCGCTGTGCGGTGTGCGCAAGAGCACCAGCCCCACGCTGCAGTTCTTCACGTTTCCCAAGGACGAGAAGTATCTGCACCAGTGGCTGCACAACCTCAAGATGTTCCACATTCCGGCCTCGAGCTATGCCACATTTCGCATCTGCAGCATGCACTTCCCCAAGCGTTGCATCAATCGCTATTCGCTGTGCTACTGGGCGGTGCCGACGTTCAATCTGGGCCACGATGATGTGGCCAATCTGTATCAGAACCGGGAGCTGACCAACACCTTTACCACCGGGGAGGTGGCCCGCTGCAGCATGCCCAATTGCACCAGCCAGCGCGGCGAAAGCAATCTCAAGTTCTACAACTTCCCCAAGGACATCAAGAGCCTGATCAAATGGTGCCAGAACGCCCGCCTGCCCGTCCAGGCCAAGGAGCCGCGACACTTCTGCAGCCGCCACTTCGAGGAGCGCTGCATCGGCAAGTTCCGACTGAAGCCCTGGGCTGTGCCCACCCTCCATTTGGGCGCCCAGTACGGCAAGATCCATGACAATCCAAAGAACCTCTATGTGGAGGAGAAGCGCTGCTGTCTCAACTTCTGTCGACGCAGCCGCTCCTCAGACTTTAACATGTCGCTCTATCGCTTTCCCCGAGACGAGGTGTTGCTGCGACGCTGGTGCTACAATCTACGTCTCGATCCGGCCGTCTATCGCGGCAAGAACCACAAAATATGCAGCGCCCACTTCATCAAGGAGGCGTTGGGACTGCGCAAACTGTCTCCGGGCGCTGTACCCACGCTGCATCTGGGCCACAATGACACCTTCAACATCTACGAGAACGAGCTGtggccgccgccgtcgccctCGACGCCCACCCACAATcaccagcaacaactgcaccagcagcagcagcagcaacatcagcatcagctgcagcaacaacagtcacACGTGCATCACAAATATCAGCGGCACTCGGCCGCATCCACATCCTCCTCGGCCAGCTCGGCGTCGCACTACGTGGATCCGGAGCAGAGTGCATCCTATGTGGGAATGGGTGCCGCGGCCGGCGGCCTCAATGTCAGCGACAGCATGGACGTGTGCTGTGTGCCCAGCTGCGAGAGCAAGCGgcacaacaacgagaacaTCACATTCCATACGATACCGAGGCGGCCGGAGCAGATGCGCAAGTGGTGCCACAATCTGAAGATACCCGAGGAGAAGATGCACAAGGGGATGCGTATATGCAGCCTGCACTTTGAGCCCTACTGCATTGGCGGCTGCATGCGTCCGTTTGCGGTGCCCACGCTGCATCTGGGCCACGACGACGAGGACATTCATCGCAATCCGGACGTGATCAAGAAGCTGAACATACGCGAAACCTGCTGTGTGGCCGTATGCAAGCGCAACCGGGATCGGGATCACGCCAATCTCCATCGCTTCCCCAGCAACATCGCCCTGCTGACCAAGTGGTGCGCCAATCTGCAGCGACCCGTGCCGGATGGCAGCAAGCTCTTCAACGATGCCATCTGCGAGGTGCACTTCGAGGAGCGCTGTCTGCGCAACAAGCGTCTGGAGAAGTGGGCGGTGCCCACGCTCGTCCTCGGCCACGAGAACATCGCGTATCCGCTGCCCACCGCCGAGCAGGTGGCCGAGTTCTATGCGCGTCCCAGTGCGCCCAACAATGGCGAGGAGCAGGGCGAGTGCTGTGTGGAGAGCTGCAAGCGCAATCCCAGCGTCGACGACATCAAGCTATATCGCCCGCCCGAGGAGTCACAGGTGCTGACCAAGTGGGCGCACAACCTCCAGCTGGACATTGCCCAGCTGCCCAGCATGCGCATCTGTAACCTGCACTTTGAGGCCCACTGCATTGGCAAGCGGATGCGGCCCTGGGCCATTCCCACGCTCAATCTGGCCACCAACATTGAGAATCTCTTCGAAAATCCCGAGCAGCAGATGCTCTACAAGCGGCGCACGCATCTCCAGACGACGGATAGGGCGGGCAGCCGTGGCACCACCATCAAGCCGACGTGGGTGCCGCGCTGCTGCCTGCCACACTGCCGCAAGGTGCGCGCGCTGCACAACGTTCAGCTGTATCGCTTCCCCAAGCTGAATCGCGCCACGCTGGCCAAGTGGGCGCACAATCTGCAGGTGCCGCCTGTGGGCAGCGCCCAGCGGCGTCTCTGCTCCGCCCACTTTGAGCCGCATGTGCTCAGCAAAAAGTGCCCGGTGCCGTTGGCGGTGCCCACGCTCGACTTGAACACGCCGCCCGGCTACAAGATCTACCAAAATCCCGCCAAGCTCAAGGCCAACAAGCTGTGTCTGCAGCGCGTCTGCATCGTGGAGAGCTGCCGCCGGCAGCGTTCGCAGGGTGTCCAACTGTTCCGTCTGCCGCACAGTCCCTCCCAGCTGCGCAAATGGATGCACAACATCCGGATGCGACCACGCGGCGCCATGCGCCAGCAGTATCGCATCTGTTCGCTGCACTTCGAGACGCACTCGTTCAACGGGAAGCGACTGAGCGCCGGCGCCATTCCCACACTGGAGCTGGGccacaacgacgacgacatcTATCCGAATGAGGCGCAGGCGTTCGTCGATGAGCACTGCACCGTCGAGGGCTGTGACGCGGCTAAGGAGCAGCCGGATGTGCGACTCTTCCGTTTCCCCAGTGACGACGAGGATCTACTGTGGAAGTGGTGCAACAATCTCAAAATGAATCCGGTCGACTGCATCGGTGTCCGCATCTGCAATCGCCACTTCGAGCCGGACTGCATCGGCCCGAAGCATCTGTTCAAGTGGGCCATACCCACGCTGACGCTTGGCCACGACGATGCCCAGATCGAGCTGATACCCAATCCCCGGCCGGAGGACCGCTACGTGGACCCGGTGTTCAAGTGCTGTGTGCCCACCTGCGGCAAGACGCGCAAATTCGACGAGGTGCAGATGAACAGCTTCCCCAAGGATCCGGTGCTCTTCGAGCGCTGGCGCCACAATCTCCGGCTAGATCATCTGAACTTCAGGGAGCGCGAACGGTACAAGATTTGCAATGCGCACTTCGAGGACATCTGCATTGGCAAGACGCGACTGAACATTGGCTCCATACCCACGCTGGAGCTGGGCCATGATGAGACCGAGGATCTGTACCATGTCAATCCCGACGAGCTGCAGAGCAACCTGTTTGGACGCCAGCGACGAGTCCACGATAGTCTGGGTCTGCGTATCAAACTGGAGGAGCCGGACGAGGATGAAGAGATCAGCCACAAGAGCCAGgCCACAAACAAGCGATCCCTGACGGAGCTGAGGTGTTGCGTGGCGAGCTGCCGGCGCGGCCGTCTGGAGCACGGCGCCCGCCTCTTTGCCTTTCCCAgcggcaagcagcagcagagcaagTGGCGCCACAATCTGCGCCTCAGCGCCGCCGACGTGGACCGGACGACGCGCGTCTGCAGCCTCCACTTCAATCGCCGATGTATCGATGGCAAGCAGCTGCGCAGTTGGGCCATGCCCACCCAGCAGCTGGGCCACCAGGAGCAGCCCATCTACGAGAATCCAAAGAATATACCGGGCTTCTTTACGCCCACCTGCGCGCTGGCCCACTGTCGCAAGCGGCGCAGCATCGACAACGATCTGCGCACCTATCGCTATCCGCGTAGCGAGGAGCTGCTCGAGAAGTGGCGCATCAATCTGCGGCTGGCGCCGGATCAGTGTCGCGGCCGCATCTGTGCGGACCACTTCGAGCCGATGGTGCGCGgcaagctgaagctgaagacGGGTGCGGTGCCCACGCTGAATCTGGGCCACAACGAGGACGTGGTCTTTGACAATGAGGCCATCAAGGCGGGACTgcagcaggaacaggagcTGGATGAGGAAGAGGAGGAAGCGGGTAGCTTGGAGTCGGTGGTAAAGGTAAAGAGTGAGCAAATGGATGAGGAGCTGCCAGAGAACGATCATGAAGAGGAGCAGGAGACAGAAAAGCAGCatgaagaggaggaggaggagcagcagcagcagcatcaggaggaggaggaggaggaggatcaTGGCTATTTCGATCCTCTGGAACTCGTTGAGACCTTTGCCGAGCAGCACAGCGATGACAATTCCGCTGAAGGCGATGCAGATGCAGCTGAAGATGCAGATGATGATAActacgatgatgatgatgatgatgatgatcaagATATATCCGGCAACGAtgatgagctgctgctgccggacACTGTGCCCATCAAGCTGGaggagctgccgccgccgccaccgacGCCGGTCCGTCGCGAAAGAACCGTAAACAATGTGACACCCATCTGCTGCCTGAAGCACTGCCGCAAGCAGCGCACGGCGAGCCACCAGCTGAGCACCTTTGGCTTTCCCAAGGatcggcagcagctgctcaagtGGTCCGCCAatctgcagctggagctggacgAGTGCGTGGGACGCGTCTGCATCGAACACTTCGAGCTGGAGGTGCTGGGCACGCGCAAGCTGAAGCAGAATGCGGTGCCCACGATCAATGTGGGTCACGGGACGCCACTCGCCTATAGCTGCACTGGGCAGGCGGTGGATGGCATCTATGATGCACAGCCGCAGCATTCGGTTTTTCGGCTTTCGAGCCTGAAACACTGTCGCAAAAGGAAGCTGGAGGATGTGGAGGTGGTGCCGCCGGATCTGGCGACGATTAATCGACGCTGCTGCATCCTGCCCAGCTGTGGCAAGTACGATGTCTGGCTGCACCGCCTGCCCAAGgatcgcctgctgctgcgcaaATGGCTGCACAATCTGAAACTGCCGAAGGACACGAACCCCGTTCAGGCGTGGCTGTGCGAGGAGCACTTCGAGCCGGATGCATCGGTGCCCACACTGAAGCTGGGCCACAGCGATCCCAAAATTTATCGGTGCAGCAGCGTCACCAGTGTCACCTccgccgccagcagctgccTGGTGCCCAGCTGTCCGTGTGCCCGTCTCAATCTGTATCGGGCCTACGACCTGCCCGATCATCCGCTCGTGCAGCAGGCCTGGCTCGACTGGCTGCAGCTGCCCCGCCCCCAGCTGgccagccacgcccagctGTGCGTGATGCACTTCATGCAGCTGTACGAGCAGGTGCCCCTGCCCAAGGAGCTGCCGGAGATGAcgctgcgccagctgcaggACACCTACGAGGTAATCGCCGACTCCACCATGGCCATGAAATTGCGCTGCGCGGTGCCCGGCTGCAATTCCAAGTACACGGACAACGTGCGGCTGACCCAGCTGCCCAAATGTCCGGATTTGTGCGCCAAGTGGCTGCACAACACCAAGATATCCTACGAGGACGAACGCCGTCACGCCTATCGCATCTGCATGCTACACTTTGAGCCGCGCAGCTTGGGTTCGGTGCGTCCCAAGCAGTGGGCGGTGCCCACGCTCCGGCTGAACCACGAGGACACCGATATCTATCACAATCCGCCGCCAGTCAGCGATAATCCGCCAGCAGCAATAACTTCAGCAGCAATAACTTCAGCAGCAATAACTTCAGCAGCAATAACTTCAGCAGCAATTACTTCAGTTGCAAAGCCAGCAGCGTCGCCTGTGCCGCTCGAGCTGCCGCTGCGCATCAAAACGGATCTGGCGCCTGTGCTGAGCATCAGtcccagcgccagcgccagcccGAGTCCGCGCGGCAAGCTGCGCACCTGCTGCATACCCAGCTGCGGCCAGCAGGCGAACGCCCTCAATCGACTCTTTCGGTTTCCCAGCGCGGAGACTTCGCTGCTCAAGTGGCTGGTGaacacgcagcagcagccgcgccTGGTCGACGCACAGCATCTGTTCATCTGCCAACAACACTTCGAGCCGGAGGCCATTtgcaagcagcagctgcgcagcTGGGCGCTGCCTACGTTGAAGCTGGGCCACAACGACTACGTCATACCGAATGCCAAGCACAACGGCAACATTGCCGACAGCCAGGAGAACAAACAGGCGCTCCAGCACATCTGGGCCAACTACTGTTCGGTGCTCAGCTGCTTCCAGCGTCGCAGCGATCAGCTGCGCCTCTACGCCTATCCCAAGGATCGACCCACCATCCGCCGCTGGGCGGCCAACTGCAAGCATCGATCCATGCAGGCCAGCAGCGATGGATTCCAG
Protein Sequence
MAPPPAPAANRHTLDASGEMIIKSEPIEEHAFKSNYIDDNTPFADFSKFPEFGDDMLSPKVELTVKDVAYGNQKNPLSYPRRKLQTERSSESLPICQRCKEVFFKKHIYLRHVAESNCSIHEYEFKCNICPMSFTGIEELQKHKQLHRADKFFCHKYCGKHFDTIAECESHEYMQHEYDSFVCNMCSMTFATREQIYAHLPQHKFQQRYDCPICRLWYQTALELHEHRLAAPYFCGKYYAAAHQPQQQQQQQQQQQQQQQQQQQQHPQHTQGNYKLQDCHMGTIEMTPSHHKTNALPATAALSSLLQQRQANADGAALYASAMKSEANVKLERSYSNSTSESGYSLHESSSYNNAYGSDNSLHGSGAAIGGPQAHSSTLDESEDALCCVPLCGVRKSTSPTLQFFTFPKDEKYLHQWLHNLKMFHIPASSYATFRICSMHFPKRCINRYSLCYWAVPTFNLGHDDVANLYQNRELTNTFTTGEVARCSMPNCTSQRGESNLKFYNFPKDIKSLIKWCQNARLPVQAKEPRHFCSRHFEERCIGKFRLKPWAVPTLHLGAQYGKIHDNPKNLYVEEKRCCLNFCRRSRSSDFNMSLYRFPRDEVLLRRWCYNLRLDPAVYRGKNHKICSAHFIKEALGLRKLSPGAVPTLHLGHNDTFNIYENELWPPPSPSTPTHNHQQQLHQQQQQQHQHQLQQQQSHVHHKYQRHSAASTSSSASSASHYVDPEQSASYVGMGAAAGGLNVSDSMDVCCVPSCESKRHNNENITFHTIPRRPEQMRKWCHNLKIPEEKMHKGMRICSLHFEPYCIGGCMRPFAVPTLHLGHDDEDIHRNPDVIKKLNIRETCCVAVCKRNRDRDHANLHRFPSNIALLTKWCANLQRPVPDGSKLFNDAICEVHFEERCLRNKRLEKWAVPTLVLGHENIAYPLPTAEQVAEFYARPSAPNNGEEQGECCVESCKRNPSVDDIKLYRPPEESQVLTKWAHNLQLDIAQLPSMRICNLHFEAHCIGKRMRPWAIPTLNLATNIENLFENPEQQMLYKRRTHLQTTDRAGSRGTTIKPTWVPRCCLPHCRKVRALHNVQLYRFPKLNRATLAKWAHNLQVPPVGSAQRRLCSAHFEPHVLSKKCPVPLAVPTLDLNTPPGYKIYQNPAKLKANKLCLQRVCIVESCRRQRSQGVQLFRLPHSPSQLRKWMHNIRMRPRGAMRQQYRICSLHFETHSFNGKRLSAGAIPTLELGHNDDDIYPNEAQAFVDEHCTVEGCDAAKEQPDVRLFRFPSDDEDLLWKWCNNLKMNPVDCIGVRICNRHFEPDCIGPKHLFKWAIPTLTLGHDDAQIELIPNPRPEDRYVDPVFKCCVPTCGKTRKFDEVQMNSFPKDPVLFERWRHNLRLDHLNFRERERYKICNAHFEDICIGKTRLNIGSIPTLELGHDETEDLYHVNPDELQSNLFGRQRRVHDSLGLRIKLEEPDEDEEISHKSQATNKRSLTELRCCVASCRRGRLEHGARLFAFPSGKQQQSKWRHNLRLSAADVDRTTRVCSLHFNRRCIDGKQLRSWAMPTQQLGHQEQPIYENPKNIPGFFTPTCALAHCRKRRSIDNDLRTYRYPRSEELLEKWRINLRLAPDQCRGRICADHFEPMVRGKLKLKTGAVPTLNLGHNEDVVFDNEAIKAGLQQEQELDEEEEEAGSLESVVKVKSEQMDEELPENDHEEEQETEKQHEEEEEEQQQQHQEEEEEEDHGYFDPLELVETFAEQHSDDNSAEGDADAAEDADDDNYDDDDDDDDQDISGNDDELLLPDTVPIKLEELPPPPPTPVRRERTVNNVTPICCLKHCRKQRTASHQLSTFGFPKDRQQLLKWSANLQLELDECVGRVCIEHFELEVLGTRKLKQNAVPTINVGHGTPLAYSCTGQAVDGIYDAQPQHSVFRLSSLKHCRKRKLEDVEVVPPDLATINRRCCILPSCGKYDVWLHRLPKDRLLLRKWLHNLKLPKDTNPVQAWLCEEHFEPDASVPTLKLGHSDPKIYRCSSVTSVTSAASSCLVPSCPCARLNLYRAYDLPDHPLVQQAWLDWLQLPRPQLASHAQLCVMHFMQLYEQVPLPKELPEMTLRQLQDTYEVIADSTMAMKLRCAVPGCNSKYTDNVRLTQLPKCPDLCAKWLHNTKISYEDERRHAYRICMLHFEPRSLGSVRPKQWAVPTLRLNHEDTDIYHNPPPVSDNPPAAITSAAITSAAITSAAITSAAITSVAKPAASPVPLELPLRIKTDLAPVLSISPSASASPSPRGKLRTCCIPSCGQQANALNRLFRFPSAETSLLKWLVNTQQQPRLVDAQHLFICQQHFEPEAICKQQLRSWALPTLKLGHNDYVIPNAKHNGNIADSQENKQALQHIWANYCSVLSCFQRRSDQLRLYAYPKDRPTIRRWAANCKHRSMQASSDGFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00550923;
90% Identity
-
80% Identity
-