Dmic000086.1
Basic Information
- Insect
- Drosophila micromelanica
- Gene Symbol
- lov
- Assembly
- GCA_004143905.1
- Location
- SCDX01000196.1:102144-112604[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 6e+03 -3.2 0.0 18 27 99 108 99 108 0.94 2 2 2.8e-19 6.2e-16 57.6 0.0 1 44 235 278 235 279 0.96
Sequence Information
- Coding Sequence
- GCCgcggccgctgccgccgtGGCCGCAGCCGGCGCTGCCGGCGAGAATCCGTTCCATCACATGGAGCACCAGATGGAGATGTCGCTGGCCGCGGCCGCCGCAGCGGCGGCGATGCAccagcgggagcgggagccgCGGGATCCGCGCGAGACCAGGGAGCAGGCGCTGCAGCGGGAGCACAATGCGTTCGCCAGCAACCTGCTGGGGCCGATGGGGCTGCCCAACTTCGGCGGGCACAATGGGGCGCCGGGGGCGGGCTGTCCGGGTCAGGCGCCGCACGAGCGACTCGAGGAGAGCATGAATCGGCTGAGCAAGGAGTTTGGCAAGGAGTTCGGCAAGGAGTTTGGCAAGGAGTTCGGCAAAGACTTTGGCAAGGACTTTTGCAAGGAGTTCGCGCCCACATCGCCAATGAGCCTGCCCGGCCACTACAATCCCCAGGACGGACAGCCGCATCCGCCGTCGCCGCTGCCCTTTCCCGGCATGTCCTcggcgctgacgctgacgccgcCGCACATGTTTGGTCTGGACTCGCCGCTTGGCCTATTTCCGCCCGGCATTGATCCTGGCAAACTTTACAATCCGCTGATGGAAATGAGCGATCCACGGGATATGCCCGGCGGTCCGCCGCCGTTTCTCAAAAAGAAAATGCCACGGCCCAAGGGACAGCATTCGGCGCCACGCGGCGGCCCGCCTCGCTCCTGGACGAACACGGAGCTGACGGAGGCGCTGCAGCACGTGTGGAACAAGAAGATGACCACGTCGCAGGCGTCGCGCATCTTTGGCATTCCCTACAACTCGCTGCTGATGTACGTGCGGGGCAAGTACGGCAAGAGCCTgaagctggagcagctgcgcaaGGACTGCATCAGCGGCCCGCCCATCGAGATGCTGCAGATGGgcatcagcggcagcggcggcggcggctccaAGAGCGAGAAGAAGGAGCGCAAGGAGAAGGACAAGGAGAAGAATGCGTCCGGCTCCAATGCCAGCTCGGGCGGCAACAATGGCGCCtctggtggcggtggcggtggcaatGGCAGTGGCGGTGGTGGTGCCGGTGGTGGCCCACCGTCCATGCCGCATCCGAACGATCTGGGCGGACTGGGTCCGCTTGATCTGGAGCTGGGCCTGCCGCTGGGTCCGCCAGCCGGTCcgcgcagcggcagctccGAGCCGGATCTGCTGGGCGGACCGAATGCGCTCTTCAATCCGTTCAATCCGCAGGGCTTCTATCCAGACTTTGCCGGCGGCTTTCCGGGCCTGCCGCTGAGCATGCTGAACCTGCTGCCGCCCGCGGAGCGCCACCATGCGGCGGTGGCCATGCACCACCTGGGCGTCAGCATGGACGAGGACTGCAAGTCGGTCGGCTCCAAGCAATCCTCCTCGCTGGACGACGACTTCGTTGCCGCCGCTCTGGAGCAGCGCCGCCACAGCGAGCTGGCCGGCAATGGGGCGACGATGGCGCAGGCGAATGGGGCGGCGCAGGATTGA
- Protein Sequence
- AAAAAAVAAAGAAGENPFHHMEHQMEMSLAAAAAAAAMHQREREPRDPRETREQALQREHNAFASNLLGPMGLPNFGGHNGAPGAGCPGQAPHERLEESMNRLSKEFGKEFGKEFGKEFGKDFGKDFCKEFAPTSPMSLPGHYNPQDGQPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGSGGGGSKSEKKERKEKDKEKNASGSNASSGGNNGASGGGGGGNGSGGGGAGGGPPSMPHPNDLGGLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDDFVAAALEQRRHSELAGNGATMAQANGAAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -