Basic Information

Gene Symbol
onecut
Assembly
GCA_004143905.1
Location
SCDX01001870.1:19594-23433[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-37 8.6e-34 115.2 0.4 2 78 816 892 815 893 0.97

Sequence Information

Coding Sequence
ATGGAATCAATGAACGAAATAATTGACTCGCAAACGTTTAGCCAGCAGCTGGTTGTGGAAACAAGTGAATTCATAAGAGGAGGAGTTGGACAGCAGCCACATCAGACTCAGACTCAGACTCAGACTGAGGAAGGGGAAACTGGTGAAGCTAGTGATGCTGCCGCAGGGATGAAGTACATTAAAAGACGTACAGAGGCGGAATCGCCGGCGGGCTTAAGTGGCGCAATGCAGACACTGATCGCTACGACAGAGCAGGGTAATCGCATCCATGAAGATGAGGAGTCTACCTCCGTTGTTATGGTCATCGATGAGATGGGTCACAGCAATTTGCAAACGACCTATCAGATAGTGCCTCAACAGCTTCAAATACACGGCGGTAGGAATATGCCGCTGTCCTTATTACCGATGCATCACGAGCGCAACGATCGGTTGGCTGTTAATAGTCCAGTTGATTTTGGAGGGTCTGACATCAGTCTGGACGGGTTGAGCGTGAATACAGCGTCTCAGATAATTGCAGTCAAACAGGAGCACAAGCTAGTGATTGTACACCATGACCGTGACCATGGCGAGGATGCCGATTCCAATGGGCACGGTAATGACAGCACCAATCGGCGTGAAAGTCCACGTATGGACCTAAGCATGTCAAATATTAATGCGAATATTAGCTGTATTGACGAGTTATCCTCTGACGGTGGCATTGAGGAGGTCACACTAAACCAACATCACCATCAGCTTTTAGAGGAgaatcagcatcagcatcagcatcagcaccaggcccagcatcagcaccagcaccagcaccatcAACACCATCAACAATACGGTCATCGTCTTGCCGCTGCATCCGATTTGGTCCaccatcaacatcagcatcagcagcatcagcagcatcagcagcagcatcagcagcaccagcgTCACCAGCAGCGTACAGTGCAACTGGGTGCAATCGGTGGTCATGGACATCTGGGTCACCATCGGGAGGCGCTGTCGGTTATTGTTCAGACGCAGGAGGATGACGAGGATATTGATGAAGATGAGGACGATGATGATCGCGAGTCGGGGGGTCACTTGCTCAGTCCAGCGTTGGCCGTTGACAACTCACTGGAGCATAGCACGTATCAGACATTGACTTCGGTCAACAATCGCATATCAGAGCCGGGTTTCAGCCCCACATCGTATGCAACGCTGACACCCATCCAGCCGCTTCCGCCCATTTCTACCATGTCGGATAAGTTTGCCTATACGGGACACATTTCCGGCAGTGCCAGCTCATCGGGTAGCGCAAACGGTGGCAGCAGTGCCACCTCGACCGGTAGGATTAACACCGGTGCCACCTCAGATGGCAGCAACAATCATTGCAGCTCATTCACAAGTTTACCCATGCCCATAGAGGGATCACACCAGGGCTCGCTGGGTAACTTGAGCCTGAGTGGTCTGAGTGGTGTTCAGTCACCGTATTCCTCCTATGATAAATTGCCTTCGCTGATTTCACCTCCGCCTCACAACTATGCCAGCTCGCCGTCGCACGGTCTCTCCGGCATGGTTGGATCATGCGATTTGCACACTCACAGCTCATCGGTGCCATCACCAGTGCCTGGATCAGTGCCAGGCGGCTGTGACGCACTTTCGCCTCAATCCGAAATGCACTCGCATTCGCCCCAGCTTCAGGTCAATCTTAATACGCATAAATCAGCGACAGCTAGCCACGGCCATGGCCAGTGTCATAGTCAAGGCGGCCAGGCCATGCAACTGGTGCCAGTGGCTCTTCAAAAGCAGGTAATATGCCTATCGCCGACAAGTGGAATGGCGGATGGGGTCGTTGTCAGCGATTACAAATCCTCATACAGCACACATCAACATCATGATCATGAACTTGTTATGGCCACCGCCATCAGCTCATCCACAAAATCGTCGCGATTGCAGCACAGCCCAACTCAGCTCAGTCCGCATTCTGTGTCCGCTGGCTCCGTCGTGTCCATGTCCTTGCACTCACCGGCATCTGTCGTGACCTTGCCGCACATGAACGGCTCTGTCGCAAATCTTTCCGTGGACTTGCCCGTTGTTGTCTCACTTACGCCCACACCACCGCCTGGCGATGGCTCCATTGCGGTAAGCATTGACGACTTAGttcagcagcgacaacagcagcacaatcAGCAGCAAATACTCCAGACAAGCGCTAAACACGAGAGCAATGAATGCCATCCAAATGGCGACCACAATTTGTCTACTATAACAACTGGCAATAATCTAGATGTGTGCAATAtaaatcaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcaaaacggATTCCTCagtgaacagcagcaacataagcATTCACCCAAGTTAACGGGCTCAGTGGCTTCAGTGGCCACAACATCTTCCAATGCGACGGTGAATAATCGTTCGACTGGTCCCAATGACATGGAGGAGATCAATACCAAGGAGTTGGCCCAACGCATTTCAGCTGAGCTAAAGCGTTACAGCATACCACAGGCGATATTCGCTCAGCGTGTCCTTTGTCGATCGCAGGGCACTCTTTCCGATCTGTTGCGTAATCCGAAGCCATGGTCAAAGCTTAAGTCGGGCCGCGAAACGTTCCGACGCATGTTCAAATGGCTCCAAGAGCCTGAGTTCCAGCGTATGTCAGCTCTGCGCATGGCCGCCGCACAGATACCGCAACGTCCAACAAGTGGCGCTGTCTCTGCAGGAGCAGGATCAGCAAGCATGGCAAGTGTTGCATTCTCAGCAGGATCGGCGTCGGCAGCATCCCCTGTAGTGCTGACCAACACAACTTCAGACGCATCGCATGTCTCAAACATTTCGGGAAATGCCATGTTGACCGGGTCTGGGGTTGGCGCTGCAGCCAACTGCCGTCGGAAGGAGGAGCCGCACATAGAACAAATGCCGCAGCCAAAAAAGCCCCGTTTAGTTTTTACAGACCTGCAGCGGCGCACATTACAAGCAATTTTTAAGGAAACTAAGAGGCCTTCAAAAGAGATGCAAGTGACAATTGCACGCCAGCTGGGACTGGAGCCCACCACAGTGGGCAATTTCTTTATGAACGCTCGTCGGCGCTCCATGGACAAGTGGCGCGATGACGACAACAAGAACTCACATTCGCACAGTCGGCAACAACAGGAAGAGCCGGAGGAGAGGGAGAGCAATAGTGGAACGCACGGGCCTTACAGTAGCATACATACGACTGCAATGTCTCCGCTGGGCAATTTTGACGACGACGGTGAAATGGACTTGGAGCTGGAGCATCATGATTTTCTAGTTGACGATCACGACGGCGATGAGCATGACGACATGTTGTGA
Protein Sequence
MESMNEIIDSQTFSQQLVVETSEFIRGGVGQQPHQTQTQTQTEEGETGEASDAAAGMKYIKRRTEAESPAGLSGAMQTLIATTEQGNRIHEDEESTSVVMVIDEMGHSNLQTTYQIVPQQLQIHGGRNMPLSLLPMHHERNDRLAVNSPVDFGGSDISLDGLSVNTASQIIAVKQEHKLVIVHHDRDHGEDADSNGHGNDSTNRRESPRMDLSMSNINANISCIDELSSDGGIEEVTLNQHHHQLLEENQHQHQHQHQAQHQHQHQHHQHHQQYGHRLAAASDLVHHQHQHQQHQQHQQQHQQHQRHQQRTVQLGAIGGHGHLGHHREALSVIVQTQEDDEDIDEDEDDDDRESGGHLLSPALAVDNSLEHSTYQTLTSVNNRISEPGFSPTSYATLTPIQPLPPISTMSDKFAYTGHISGSASSSGSANGGSSATSTGRINTGATSDGSNNHCSSFTSLPMPIEGSHQGSLGNLSLSGLSGVQSPYSSYDKLPSLISPPPHNYASSPSHGLSGMVGSCDLHTHSSSVPSPVPGSVPGGCDALSPQSEMHSHSPQLQVNLNTHKSATASHGHGQCHSQGGQAMQLVPVALQKQVICLSPTSGMADGVVVSDYKSSYSTHQHHDHELVMATAISSSTKSSRLQHSPTQLSPHSVSAGSVVSMSLHSPASVVTLPHMNGSVANLSVDLPVVVSLTPTPPPGDGSIAVSIDDLVQQRQQQHNQQQILQTSAKHESNECHPNGDHNLSTITTGNNLDVCNINQQQQQQQQQQQQQQQQNGFLSEQQQHKHSPKLTGSVASVATTSSNATVNNRSTGPNDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQIPQRPTSGAVSAGAGSASMASVAFSAGSASAASPVVLTNTTSDASHVSNISGNAMLTGSGVGAAANCRRKEEPHIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDNKNSHSHSRQQQEEPEERESNSGTHGPYSSIHTTAMSPLGNFDDDGEMDLELEHHDFLVDDHDGDEHDDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00588653;
90% Identity
iTF_00547263;
80% Identity
iTF_00547263;